CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPA27011
(
Pristionchus pacificus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
PPA27011
T305931_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA27011
Nuclear receptor
12
84
PTCDVCGDAATGHHYQVPSCNGCKNFFRRAILGMKVFKSCPYDGECLSTDNNTALKKCRACRFTCSVRAGMKP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus pacificus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPA24468
Pristionchus pacificus
PPA24468
I
0.828
PPA27012
Pristionchus pacificus
PPA27012
N
0.794
PPA27013
Pristionchus pacificus
PPA27013
N
0.801
RSKR_0001171300
Rhabditophanes kr3021
RSKR_0001171300
I
0.806
scaffold265-EXSNAP2012.2
Pristionchus exspectatus
scaffold265-EXSNAP2012.2
I
0.828
scaffold426-EXSNAP2012.35
Pristionchus exspectatus
scaffold426-EXSNAP2012.35
I
0.808
scaffold92-EXSNAP2012.31
Pristionchus exspectatus
scaffold92-EXSNAP2012.31
N
0.888