CBG23697_CONSTRUCT (PBM CONSTRUCTS)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 CBG23697_CONSTRUCT T306948_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG23697_CONSTRUCT
M01299_2.00		 PBM CONSTRUCTS
NNTKTGTGTYN
NRACACAMANN		 PBM
Lambert et al.(2019)
pTH11459		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01299_2.00 Nuclear receptor 11 74

DNA Binding Domains

Protein ID Domain From To Sequence
CBG23697_CONSTRUCT Nuclear receptor 11 74

Links

Other Nuclear receptor family TFs
Other PBM CONSTRUCTS TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30005.m001261 Ricinus communis 30005.m001261 N
AT3G07565 Arabidopsis thaliana AT3G07565 N
Bo1g147290 Brassica oleracea Bo1g147290 N
Bo3g061340 Brassica oleracea Bo3g061340 N
Bostr.22252s0273 Boechera stricta Bostr.22252s0273 N
Bra001258 Brassica rapa Bra001258 N
Bra029658 Brassica rapa Bra029658 N
Bra040015 Brassica rapa Bra040015 N
Cagra.0133s0101 Capsella grandiflora Cagra.0133s0101 N
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N
fgenesh2_kg.3__781__AT3G07565.3 Arabidopsis lyrata fgenesh2_kg.3__781__AT3G07565.3 N
Gorai.N001000 Gossypium raimondii Gorai.N001000 N
MDP0000184998 Malus domestica MDP0000184998 N
MDP0000716430 Malus domestica MDP0000716430 N
Pm007242 Prunus mume Pm007242 N
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N
PRUPE_ppa010592mg Prunus persica PRUPE_ppa010592mg N
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N
TCM_002550 Theobroma cacao TCM_002550 N
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N