GPLIN_000548600 (Globodera pallida)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 GPLIN_000548600 T308673_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR5A2
M05589_2.00 		Homo sapiens
YCAAGGYCRYGRCCTTSR
YSAAGGYCRYGRCCTTGR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1 		0.978 0.729
NR5A2
M05590_2.00 		Homo sapiens
NYCAAGGTCAH
DTGACCTTGRN		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2 		0.978 0.729
NR5A2
M05591_2.00 		Homo sapiens
YGRCCTTSVNYSAAGGYCR
YGRCCTTSRNBSAAGGYCR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3 		0.978 0.729
NR5A2
M09271_2.00 		Homo sapiens
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B 		0.978 0.729
NR5A2
M11126_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q5_01 		0.978 0.729
NR5A2
M11127_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q5 		0.978 0.729
NR5A2
M11128_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q6 		0.978 0.729
NR5A2
M05592_2.00 		Homo sapiens
YCAAGGYCRYGACCTTSR
YSAAGGTCRYGRCCTTGR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1 		0.978 0.729
NR5A2
M05593_2.00 		Homo sapiens
NYCAAGGTCRH
DYGACCTTGRN		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2 		0.978 0.729
NR5A2
M05594_2.00 		Homo sapiens
YGRCCTTSVNBSAAGGYCR
YGRCCTTSVNBSAAGGYCR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3 		0.978 0.729
ftz-f1
M02407_2.00 		Drosophila melanogaster
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH5709 		0.977 0.729
ftz-f1
M06417_2.00 		Drosophila melanogaster
MMRKYYSAAGGWCRCYGM
KCRGYGWCCTTSRRMYKK		 B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078 		0.977 0.729
ftz-f1
M06418_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078 		0.977 0.729
Nr5a2
M00816_2.00 		Mus musculus
VAAGGTCR
YGACCTTB		 PBM
Weirauch et al.(2013)
pTH3468 		0.974 0.700
Nr5a2
M08158_2.00 		Mus musculus
VRDBTCAAGGYCANN
NNTGRCCTTGAVHYB		 ChIP-seq
Mathelier et al.(2014)
MA0505.1 		0.974 0.700
Nr5a2
M09320_2.00 		Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A 		0.974 0.700
Nr5a2
M09616_2.00 		Mus musculus
BYCAAGGYCA
TGRCCTTGRV		 Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295 		0.974 0.700
Nr5a2
M09615_2.00 		Mus musculus
BYCAAGGYCA
TGRCCTTGRV		 Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019 		0.974 0.700
NR5A1
M05613_2.00 		Homo sapiens
NNCAAGGYCRN
NYGRCCTTGNN		 SELEX
Yin et al.(2017)
NR5A1_FL_HT-SELEX 		0.974 0.729
Nr5a1
M09322_2.00 		Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
STF1_MOUSE.H11MO.0.B 		0.974 0.729
NR5A1
M11142_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q5_01 		0.974 0.729
NR5A1
M11143_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q5 		0.974 0.729
NR5A1
M11144_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q6_01 		0.974 0.729
NR5A1
M11145_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q6 		0.974 0.729
NR5A1
M05614_2.00 		Homo sapiens
NNSAAGGHCRN
NYGDCCTTSNN		 SELEX
Yin et al.(2017)
NR5A1_FL_Methyl-HT-SELEX 		0.974 0.729
nhr-25
M08226_2.00 		Caenorhabditis elegans
MAAGGTCA
TGACCTTK		 ChIP-seq
Contrino et al.(2012)
Mw160 		0.965 0.714
Hr39
M03942_2.00 		Drosophila melanogaster
CAAGGHCRN
NYGDCCTTG		 SELEX
Nitta et al.(2015)
Hr39_1 		0.946 0.643
Hr39
M03943_2.00 		Drosophila melanogaster
CAAGGYCRH
DYGRCCTTG		 SELEX
Nitta et al.(2015)
Hr39_2 		0.946 0.643
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.823 0.529
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.823 0.529
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.823 0.529
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.823 0.529
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.823 0.529
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.823 0.529
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.823 0.529
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.823 0.529
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.822 0.543
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.822 0.543
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.820 0.529
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.820 0.529
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.820 0.529
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.820 0.529
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.820 0.529
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.820 0.529
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.820 0.529
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.820 0.529
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.820 0.529
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.820 0.529
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.820 0.529
Q95WG3_ACRMI
M02424_2.00 		Acropora millepora
NRAGGTCAN
NTGACCTYN		 PBM
Weirauch et al.(2014)
pTH6144 		0.818 0.614
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.806 0.529
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.806 0.529
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.806 0.529
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.806 0.529
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.806 0.529
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.806 0.529
Nr2c1
M00812_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH1284 		0.801 0.514
Nr2c1
M02399_2.00 		Mus musculus
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH3466 		0.801 0.514
NR2C1
M05597_2.00 		Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1 		0.801 0.514
NR2C1
M05598_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2 		0.801 0.514
NR2C1
M09273_2.00 		Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C 		0.801 0.514
Nr2c1
M09304_2.00 		Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C 		0.801 0.514
NR2C1
M05599_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1 		0.801 0.514
NR2C1
M05600_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2 		0.801 0.514
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.781 0.443
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.781 0.443
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.781 0.443
RORC
M02405_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6612 		0.771 0.529
Hr4
M06435_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546 		0.759 0.571
Rxrb
M02402_2.00 		Mus musculus
VRGGTCAH
DTGACCYB		 PBM
Weirauch et al.(2014)
pTH2861 		0.758 0.514
RXRB
M03415_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRB_1 		0.758 0.514
Rxrb
M03435_2.00 		Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
Rxrb_1 		0.758 0.514
RXRB
M05681_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1 		0.758 0.514
RXRB
M05682_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2 		0.758 0.514
RXRB
M09297_2.00 		Homo sapiens
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C 		0.758 0.514
Rxrb
M09330_2.00 		Mus musculus
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C 		0.758 0.514
RXRB
M05683_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1 		0.758 0.514
RXRB
M05684_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2 		0.758 0.514
Rxra
M00181_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Badis et al.(2009)
Rxra_1035 		0.754 0.529
RXRA
M03408_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_1 		0.754 0.529
RXRA
M03409_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_2 		0.754 0.529
RXRA
M03410_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_3 		0.754 0.529
RXRA
M03411_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_4 		0.754 0.529
Rxra
M03421_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Rxra_1 		0.754 0.529
Rxra
M03422_2.00 		Mus musculus
RGGTCATGACCY
RGGTCATGACCY		 SELEX
Jolma et al.(2013)
Rxra_2 		0.754 0.529
RXRA
M05671_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX 		0.754 0.529
RXRA
M05882_2.00 		Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB		 SMiLE-seq
Isakova et al.(2017)
RXRa 		0.754 0.529
RXRA
M07993_2.00 		Homo sapiens
NRRGGTCA
TGACCYYN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha 		0.754 0.529
RXRA
M07994_2.00 		Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH		 ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha 		0.754 0.529
RXRA
M09294_2.00 		Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB		 Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A 		0.754 0.529
Rxra
M09306_2.00 		Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH		 Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A 		0.754 0.529
RXRA
M11182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RXRA_07 		0.754 0.529
RXRA
M05672_2.00 		Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX 		0.754 0.529
Rxrg
M02400_2.00 		Mus musculus
VRGGTCAN
NTGACCYB		 PBM
Weirauch et al.(2014)
pTH2880 		0.750 0.514
RXRG
M03375_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRG_1 		0.750 0.514
RXRG
M03376_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRG_2 		0.750 0.514
RXRG
M03377_2.00 		Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
RXRG_3 		0.750 0.514
RXRG
M03378_2.00 		Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN		 SELEX
Jolma et al.(2013)
RXRG_4 		0.750 0.514
RXRG
M02746_2.00 		Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC		 SELEX
Jolma et al.(2010)
RXRG_dimer 		0.750 0.514
RXRG
M05615_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1 		0.750 0.514
RXRG
M05616_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2 		0.750 0.514
RXRG
M05879_2.00 		Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY		 SMiLE-seq
Isakova et al.(2017)
RXRg 		0.750 0.514
RXRG
M09280_2.00 		Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN		 Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B 		0.750 0.514
Rxrg
M09305_2.00 		Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB		 Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B 		0.750 0.514
RXRG
M05617_2.00 		Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1 		0.750 0.514
RXRG
M05618_2.00 		Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2 		0.750 0.514
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.747 0.529
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.747 0.529
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.747 0.529
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.747 0.529
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.747 0.529
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.747 0.529
svp
M06423_2.00 		Drosophila melanogaster
ARGGTCA
TGACCYK		 B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651 		0.747 0.486
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000548600 Nuclear receptor 188 257

Links

Other Nuclear receptor family TFs
Other Globodera pallida TFs

1095 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27950.m000105 Ricinus communis 27950.m000105 I
28226.m000851 Ricinus communis 28226.m000851 I
28649.m000212 Ricinus communis 28649.m000212 I
29974.m000235 Ricinus communis 29974.m000235 I
30138.m004055 Ricinus communis 30138.m004055 I
AMTR_s00010p00266320 Amborella trichopoda AMTR_s00010p00266320 I
AMTR_s00025p00174590 Amborella trichopoda AMTR_s00025p00174590 I
AMTR_s00058p00136280 Amborella trichopoda AMTR_s00058p00136280 I
AMTR_s00079p00099620 Amborella trichopoda AMTR_s00079p00099620 I
ANAC038 Arabidopsis thaliana AT2G24430 D
ANAC039 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4000352 I
ANAC039 Vitis vinifera VIT_04s0008g02710 I
anac058 Arabidopsis thaliana AT3G18400 D
anac058 Vitis vinifera VIT_17s0000g03660 I
ANAC080 Arabidopsis lyrata fgenesh2_kg.6__736__AT5G07680.1 D
Aquca_002_00662 Aquilegia coerulea Aquca_002_00662 I
Aquca_018_00116 Aquilegia coerulea Aquca_018_00116 I
Aquca_026_00305 Aquilegia coerulea Aquca_026_00305 I
BGIOSGA013151 Oryza indica BGIOSGA013151 I
BGIOSGA022861 Oryza indica BGIOSGA022861 I
BGIOSGA029508 Oryza indica BGIOSGA029508 I
Bo01320s020 Brassica oleracea Bo01320s020 I
Bo1g117610 Brassica oleracea Bo1g117610 I
Bo2g043280 Brassica oleracea Bo2g043280 I
Bo3g071500 Brassica oleracea Bo3g071500 I
Bo4g154590 Brassica oleracea Bo4g154590 I
Bo8g099810 Brassica oleracea Bo8g099810 I
Bo9g113820 Brassica oleracea Bo9g113820 I
Bostr.13129s0198 Boechera stricta Bostr.13129s0198 I
Bostr.19424s0822 Boechera stricta Bostr.19424s0822 I
Bostr.26675s0262 Boechera stricta Bostr.26675s0262 I
Bostr.26833s0095 Boechera stricta Bostr.26833s0095 I
Bostr.26833s0880 Boechera stricta Bostr.26833s0880 I
Bostr.27895s0039 Boechera stricta Bostr.27895s0039 I
Bra001705 Brassica rapa Bra001705 I
Bra003023 Brassica rapa Bra003023 I
Bra007855 Brassica rapa Bra007855 I
Bra009246 Brassica rapa Bra009246 I
Bra022319 Brassica rapa Bra022319 I
Bra022685 Brassica rapa Bra022685 I
Bra028685 Brassica rapa Bra028685 I
Bra032095 Brassica rapa Bra032095 I
Bra037585 Brassica rapa Bra037585 I
BRADI1G14467 Brachypodium distachyon BRADI1G14467 I
Cagra.1681s0009 Capsella grandiflora Cagra.1681s0009 I
Cagra.2925s0018 Capsella grandiflora Cagra.2925s0018 I
Cagra.4091s0015 Capsella grandiflora Cagra.4091s0015 I
Cagra.4622s0005 Capsella grandiflora Cagra.4622s0005 I
Carubv10001372m.g Capsella rubella Carubv10001372m.g I
Carubv10015990m.g Capsella rubella Carubv10015990m.g I
Carubv10025508m.g Capsella rubella Carubv10025508m.g I
Carubv10028330m.g Capsella rubella Carubv10028330m.g I
cassava17517.valid.m1 Manihot esculenta cassava17517.valid.m1 I
cassava1758.valid.m1 Manihot esculenta cassava1758.valid.m1 I
cassava18338.valid.m1 Manihot esculenta cassava18338.valid.m1 I
cassava2919.m1 Manihot esculenta cassava2919.m1 I
cassava361.valid.m1 Manihot esculenta cassava361.valid.m1 I
cassava44869.m1 Manihot esculenta cassava44869.m1 I
cassava46147.m1 Manihot esculenta cassava46147.m1 I
cassava9086.m1 Manihot esculenta cassava9086.m1 I
Ca_22532 Cicer arietinum Ca_22532 I
chr1.LjT35C22.60.nc Lotus japonicus chr1.LjT35C22.60.nc I
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I
chr4.CM0087.800.nd Lotus japonicus chr4.CM0087.800.nd I
Ciclev10008619m.g Citrus clementina Ciclev10008619m.g I
Ciclev10008885m.g Citrus clementina Ciclev10008885m.g I
Ciclev10012093m.g Citrus clementina Ciclev10012093m.g I
Ciclev10020480m.g Citrus clementina Ciclev10020480m.g I
Ciclev10023578m.g Citrus clementina Ciclev10023578m.g I
Cla019391 Citrullus lanatus Cla019391 I
Cla022572 Citrullus lanatus Cla022572 I
Cla023717 Citrullus lanatus Cla023717 I
CUC2 Arabidopsis lyrata Al_scaffold_0008_1815 I
Cucsa.122890 Cucumis sativus Cucsa.122890 I
Cucsa.161510 Cucumis sativus Cucsa.161510 I
Cucsa.197830 Cucumis sativus Cucsa.197830 I
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I
Eucgr.C02105 Eucalyptus grandis Eucgr.C02105 I
Eucgr.K02225 Eucalyptus grandis Eucgr.K02225 I
evm.TU.supercontig_131.88 Carica papaya evm.TU.supercontig_131.88 I
evm.TU.supercontig_244.7 Carica papaya evm.TU.supercontig_244.7 I
evm.TU.supercontig_3.509 Carica papaya evm.TU.supercontig_3.509 I
F775_05949 Aegilops tauschii F775_05949 I
F775_20638 Aegilops tauschii F775_20638 I
F775_52293 Aegilops tauschii F775_52293 I
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I
gene08765-v1.0-hybrid Fragaria vesca gene08765-v1.0-hybrid I
gene25163-v1.0-hybrid Fragaria vesca gene25163-v1.0-hybrid I
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I
GLYMA04G08320 Glycine max GLYMA04G08320 I
GLYMA06G08440 Glycine max GLYMA06G08440 I
GLYMA06G21020 Glycine max GLYMA06G21020 I
GLYMA06G35660 Glycine max GLYMA06G35660 I
GLYMA07G10240 Glycine max GLYMA07G10240 I
GLYMA12G26190 Glycine max GLYMA12G26190 I
GLYMA12G35530 Glycine max GLYMA12G35530 I
GLYMA13G34950 Glycine max GLYMA13G34950 I
GLYMA14G20276 Glycine max GLYMA14G20276 I
Gorai.002G067300 Gossypium raimondii Gorai.002G067300 I
Gorai.006G060900 Gossypium raimondii Gorai.006G060900 I
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I
Gorai.008G194400 Gossypium raimondii Gorai.008G194400 I
Gorai.010G124100 Gossypium raimondii Gorai.010G124100 I
Gorai.013G171300 Gossypium raimondii Gorai.013G171300 I
GRMZM2G386163 Zea mays GRMZM2G386163 I
GSMUA_Achr10G05070_001 Musa acuminata GSMUA_Achr10G05070_001 I
GSMUA_Achr10G19900_001 Musa acuminata GSMUA_Achr10G19900_001 I
GSMUA_Achr10G22350_001 Musa acuminata GSMUA_Achr10G22350_001 I
GSMUA_Achr7G19680_001 Musa acuminata GSMUA_Achr7G19680_001 I
GSMUA_Achr8G18420_001 Musa acuminata GSMUA_Achr8G18420_001 I
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I
LjSGA_071377.1 Lotus japonicus LjSGA_071377.1 I
LPERR03G21900 Leersia perrieri LPERR03G21900 I
LPERR06G12840 Leersia perrieri LPERR06G12840 I
LPERR09G11330 Leersia perrieri LPERR09G11330 I
Lus10001648.g Linum usitatissimum Lus10001648.g I
Lus10005537.g Linum usitatissimum Lus10005537.g I
Lus10009029.g Linum usitatissimum Lus10009029.g I
Lus10009669.g Linum usitatissimum Lus10009669.g I
Lus10020165.g Linum usitatissimum Lus10020165.g I
Lus10021659.g Linum usitatissimum Lus10021659.g I
Lus10026966.g Linum usitatissimum Lus10026966.g I
Lus10027227.g Linum usitatissimum Lus10027227.g I
Lus10038937.g Linum usitatissimum Lus10038937.g I
Lus10041924.g Linum usitatissimum Lus10041924.g I
MDP0000135860 Malus domestica MDP0000135860 I
MDP0000153949 Malus domestica MDP0000153949 I
MDP0000232008 Malus domestica MDP0000232008 I
MDP0000246482 Malus domestica MDP0000246482 I
MDP0000310981 Malus domestica MDP0000310981 I
MDP0000690168 Malus domestica MDP0000690168 I
mgf003818m Mimulus guttatus mgf003818m I
mgf021065m Mimulus guttatus mgf021065m I
mgf021404m Mimulus guttatus mgf021404m I
mgf025158m Mimulus guttatus mgf025158m I
MLOC_65286 Hordeum vulgare MLOC_65286 I
MLOC_68185 Hordeum vulgare MLOC_68185 I
MLOC_68284 Hordeum vulgare MLOC_68284 I
MTR_1g008740 Medicago truncatula MTR_1g008740 I
MTR_2g078700 Medicago truncatula MTR_2g078700 I
MTR_3g109340 Medicago truncatula MTR_3g109340 I
MTR_3g435150 Medicago truncatula MTR_3g435150 I
MTR_4g108760 Medicago truncatula MTR_4g108760 I
MTR_6g012670 Medicago truncatula MTR_6g012670 I
NAC079 Arabidopsis thaliana AT5G07680 D
NAC098 Arabidopsis thaliana AT5G53950 D
OB03G34470 Oryza brachyantha OB03G34470 I
OB06G22100 Oryza brachyantha OB06G22100 I
OBART03G26480 Oryza barthii OBART03G26480 I
OBART06G13940 Oryza barthii OBART06G13940 I
OBART09G15220 Oryza barthii OBART09G15220 I
OGLUM03G27330 Oryza glumaepatula OGLUM03G27330 I
OGLUM06G14810 Oryza glumaepatula OGLUM06G14810 I
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I
OLONG_009674 Oryza longistaminata OLONG_009674 I
OLONG_019251 Oryza longistaminata OLONG_019251 I
OMERI03G23890 Oryza meridionalis OMERI03G23890 I
OMERI07G04410 Oryza meridionalis OMERI07G04410 I
ONIVA03G27500 Oryza nivara ONIVA03G27500 I
ONIVA03G33370 Oryza nivara ONIVA03G33370 I
ONIVA09G15800 Oryza nivara ONIVA09G15800 I
OPUNC03G24220 Oryza punctata OPUNC03G24220 I
OPUNC06G13130 Oryza punctata OPUNC06G13130 I
OPUNC09G13640 Oryza punctata OPUNC09G13640 I
orange1.1g017827m.g Citrus sinensis orange1.1g017827m.g I
orange1.1g018950m.g Citrus sinensis orange1.1g018950m.g I
orange1.1g037591m.g Citrus sinensis orange1.1g037591m.g I
orange1.1g047710m.g Citrus sinensis orange1.1g047710m.g I
ORGLA03G0246300 Oryza glaberrima ORGLA03G0246300 I
ORGLA06G0124600 Oryza glaberrima ORGLA06G0124600 I
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I
ORUFI03G27440 Oryza rufipogon ORUFI03G27440 I
ORUFI06G14810 Oryza rufipogon ORUFI06G14810 I
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I
OS03G0624600 Oryza sativa OS03G0624600 I
OS06G0344900 Oryza sativa OS06G0344900 I
OS09G0497900 Oryza sativa OS09G0497900 I
Pavir.Ia01262 Panicum virgatum Pavir.Ia01262 I
Pavir.Ib03976 Panicum virgatum Pavir.Ib03976 I
Pavir.J02772 Panicum virgatum Pavir.J02772 I
PDK_20s1323531g003 Phoenix dactylifera PDK_20s1323531g003 I
PGSC0003DMG400005384 Solanum tuberosum PGSC0003DMG400005384 I
PGSC0003DMG400014845 Solanum tuberosum PGSC0003DMG400014845 I
PGSC0003DMG400019523 Solanum tuberosum PGSC0003DMG400019523 I
PGSC0003DMG400028779 Solanum tuberosum PGSC0003DMG400028779 I
PGSC0003DMG400033047 Solanum tuberosum PGSC0003DMG400033047 I
PK02366.1 Cannabis sativa PK02366.1 I
Pm005091 Prunus mume Pm005091 I
Pm011397 Prunus mume Pm011397 I
Pm024887 Prunus mume Pm024887 I
POPTR_0001s40680 Populus trichocarpa POPTR_0001s40680 I
POPTR_0006s29180 Populus trichocarpa POPTR_0006s29180 I
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I
POPTR_0012s01610 Populus trichocarpa POPTR_0012s01610 I
POPTR_0012s05280 Populus trichocarpa POPTR_0012s05280 I
POPTR_0015s02170 Populus trichocarpa POPTR_0015s02170 I
POPTR_0015s03700 Populus trichocarpa POPTR_0015s03700 I
POPTR_0018s03910 Populus trichocarpa POPTR_0018s03910 I
PRUPE_ppa007653mg Prunus persica PRUPE_ppa007653mg I
PRUPE_ppa007839mg Prunus persica PRUPE_ppa007839mg I
PRUPE_ppa025916mg Prunus persica PRUPE_ppa025916mg I
PRUPE_ppa026810mg Prunus persica PRUPE_ppa026810mg I
SapurV1A.0207s0120 Salix purpurea SapurV1A.0207s0120 I
SapurV1A.0263s0310 Salix purpurea SapurV1A.0263s0310 I
SapurV1A.0346s0160 Salix purpurea SapurV1A.0346s0160 I
SapurV1A.0377s0130 Salix purpurea SapurV1A.0377s0130 I
SapurV1A.0719s0060 Salix purpurea SapurV1A.0719s0060 I
SapurV1A.1146s0010 Salix purpurea SapurV1A.1146s0010 I
SapurV1A.1285s0100 Salix purpurea SapurV1A.1285s0100 I
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I
SapurV1A.1363s0020 Salix purpurea SapurV1A.1363s0020 I
SapurV1A.1381s0050 Salix purpurea SapurV1A.1381s0050 I
SapurV1A.1381s0060 Salix purpurea SapurV1A.1381s0060 I
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I
Sb01g014310 Sorghum bicolor Sb01g014310 I
Sb02g028870 Sorghum bicolor Sb02g028870 I
Sb08g006330 Sorghum bicolor Sb08g006330 I
Si030187m.g Setaria italica Si030187m.g I
Si036535m.g Setaria italica Si036535m.g I
Solyc03g115850.2 Solanum lycopersicum Solyc03g115850.2 I
Solyc06g069100.1 Solanum lycopersicum Solyc06g069100.1 I
Solyc06g069710.2 Solanum lycopersicum Solyc06g069710.2 I
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I
Solyc08g006020.2 Solanum lycopersicum Solyc08g006020.2 I
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I
Solyc12g036480.1 Solanum lycopersicum Solyc12g036480.1 I
TCM_012350 Theobroma cacao TCM_012350 I
TCM_014073 Theobroma cacao TCM_014073 I
TCM_031619 Theobroma cacao TCM_031619 I
TCM_036791 Theobroma cacao TCM_036791 I
Thhalv10000520m.g Eutrema salsugineum Thhalv10000520m.g I
Thhalv10011708m.g Eutrema salsugineum Thhalv10011708m.g I
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I
Thhalv10014081m.g Eutrema salsugineum Thhalv10014081m.g I
Thhalv10021200m.g Eutrema salsugineum Thhalv10021200m.g I
Traes_4AL_B44DF4ACC Triticum aestivum Traes_4AL_B44DF4ACC I
Traes_4BS_373BDBA94 Triticum aestivum Traes_4BS_373BDBA94 I
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I
TRIUR3_20591 Triticum urartu TRIUR3_20591 I
TRIUR3_27612 Triticum urartu TRIUR3_27612 I
VIT_19s0014g02200 Vitis vinifera VIT_19s0014g02200 I