CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0002159101
(
Haemonchus placei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
HPLM_0002159101
T308915_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr83
M06434_2.00
Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY
B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436
0.816
0.600
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0002159101-mRNA-1
Nuclear receptor
27
97
VPCQVCGDRSYGRHYGQWTCDGCSCFFKRSIRKSILYTCISGQNDCVIDKARRNWCPSCRLAKCFRLNMNS
Links
Other
Nuclear receptor
family TFs
Other
Haemonchus placei
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB009657
Anopheles albimanus
AALB009657
I
0.865
AARA006703
Anopheles arabiensis
AARA006703
I
0.863
AATE004130
Anopheles atroparvus
AATE004130
I
0.866
ACAC_0001082701
Angiostrongylus cantonensis
ACAC_0001082701
I
0.991
ACOC_0001282001
Angiostrongylus costaricensis
ACOC_0001282001
I
0.991
ACYPI48102
Acyrthosiphon pisum
ACYPI48102
I
0.955
AEPI004731
Anopheles epiroticus
AEPI004731
I
0.863
AFUN005541
Anopheles funestus
AFUN005541
I
0.870
AGAP002234
Anopheles gambiae
AGAP002234
I
0.863
AMAM005986
Anopheles maculatus
AMAM005986
I
0.869
AMEC011506
Anopheles melas
AMEC011506
I
0.863
AMEM012481
Anopheles merus
AMEM012481
I
0.863
AMIN000835
Anopheles minimus
AMIN000835
I
0.873
AQUA004261
Anopheles quadriannulatus
AQUA004261
I
0.863
ASTEI03427
Anopheles stephensi
ASTEI03427
I
0.869
BXY_1663900
Bursaphelenchus xylophilus
BXY_1663900
N
0.954
CapteG177303
Capitella teleta
CapteG177303
I
0.912
CBG09846
Caenorhabditis briggsae
CBG09846
I
0.985
CBN10661
Caenorhabditis brenneri
CBN10661
I
0.972
CPIJ015933
Culex quinquefasciatus
CPIJ015933
I
0.873
CpipJ_CPIJ015933
Culex pipiens
CpipJ_CPIJ015933
I
0.873
CRE25188
Caenorhabditis remanei
CRE25188
I
0.985
e_gw.356.102.1
Branchiostoma floridae
e_gw.356.102.1
I
0.787
GD19868
Drosophila simulans
FBgn0191357
I
0.816
GE10213
Drosophila yakuba
FBgn0228087
I
0.818
GF16659
Drosophila ananassae
FBgn0093680
I
0.819
GG13368
Drosophila erecta
FBgn0105640
I
0.816
GI24589
Drosophila mojavensis
FBgn0147311
I
0.807
GM10889
Drosophila sechellia
FBgn0165835
I
0.816
gw.353.21.1
Branchiostoma floridae
gw.353.21.1
I
0.787
HelroG148423
Helobdella robusta
HelroG148423
I
0.976
HPBE_0002627401
Heligmosomoides bakeri
HPBE_0002627401
N
0.826
Hr83
Drosophila melanogaster
FBgn0037436
D
0.816
HR83
Aedes aegypti
AAEL007350
I
0.864
Hsal_03084--XP_001121181.1_APIME
Harpegnathos saltator
Hsal_03084--XP_001121181.1_APIME
I
0.934
ISCW008659
Ixodes scapularis
ISCW008659
I
0.972
L596_g19535
Steinernema carpocapsae
L596_g19535
N
0.979
L798_08383
Zootermopsis nevadensis
L798_08383
I
0.930
L889_g32531
Steinernema feltiae
L889_g32531
I
0.979
L892_g29081
Steinernema scapterisci
L892_g29081
N
0.979
LCUP007875
Lucilia cuprina
LCUP007875
I
0.751
LLOJ000718
Lutzomyia longipalpis
LLOJ000718
I
0.863
LLOJ001302
Lutzomyia longipalpis
LLOJ001302
I
0.863
LotgiG132791
Lottia gigantea
LotgiG132791
I
0.974
MDOA009347
Musca domestica
MDOA009347
I
0.751
nhr-239
Caenorhabditis elegans
WBGene00021848
I
0.968
NV10871
Nasonia vitripennis
NV10871
I
0.975
Ocbimv22005486m.g
Octopus bimaculoides
Ocbimv22005486m.g
I
0.948
PPAI010314
Phlebotomus papatasi
PPAI010314
I
0.855
PTRK_0000986400
Parastrongyloides trichosuri
PTRK_0000986400
N
0.913
RSKR_0000433000
Rhabditophanes kr3021
RSKR_0000433000
I
0.976
Sakowv30002570m.g
Saccoglossus kowalevskii
Sakowv30002570m.g
I
0.954
SMAR006023
Strigamia maritima
SMAR006023
I
0.976
SMUV_0000977701
Syphacia muris
SMUV_0000977701
N
0.975
SPAL_0001030000
Strongyloides papillosus
SPAL_0001030000
N
0.913
SPU_012586
Strongylocentrotus purpuratus
SPU_012586
I
0.972
SSTP_0000371600
Strongyloides stercoralis
SSTP_0000371600
N
0.913
SVE_0494600
Strongyloides venezuelensis
SVE_0494600
N
0.907
TC010460
Tribolium castaneum
TC010460
I
0.948
tetur01g07700
Tetranychus urticae
tetur01g07700
I
0.973