MhA1_Contig1462.frz3.gene15 (Meloidogyne hapla)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 MhA1_Contig1462.frz3.gene15 T309629_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-84
M02414_2.00 		Caenorhabditis elegans
NRGTCACAAN
NTTGTGACYN		 PBM
Weirauch et al.(2014)
pTH5828 		0.775 0.500
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig1462.frz3.gene15 Nuclear receptor 30 100

Links

Other Nuclear receptor family TFs
Other Meloidogyne hapla TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BXY_0200500 Bursaphelenchus xylophilus BXY_0200500 N 0.912
BXY_1091200 Bursaphelenchus xylophilus BXY_1091200 I 0.748
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.768
CBN01168 Caenorhabditis brenneri CBN01168 I 0.775
CJA03481 Caenorhabditis japonica CJA03481 I 0.763
CRE08690 Caenorhabditis remanei CRE08690 I 0.775
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.777
L892_g8144 Steinernema scapterisci L892_g8144 I 0.759
L898_g21763 Steinernema monticolum L898_g21763 I 0.769
L898_g28806 Steinernema monticolum L898_g28806 I 0.768
Minc14030 Meloidogyne incognita Minc14030 N 0.797
Minc16419 Meloidogyne incognita Minc16419 N 0.961
nhr-84 Caenorhabditis elegans WBGene00003674 D 0.775
SMUV_0000721901 Syphacia muris SMUV_0000721901 I 0.804
SVE_1003800 Strongyloides venezuelensis SVE_1003800 N 0.786