CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0000267601
(
Schistosoma mattheei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SMTD_0000267601
T310381_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0000267601-mRNA-1
Nuclear receptor
15
68
RACLLCGLVKTLNQFQLNGCENCEDFLKMQGDREKVYECSSANFDGLLAMMSPN
Links
Other
Nuclear receptor
family TFs
Other
Schistosoma mattheei
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_09674
Phytophthora parasitica
F443_09674
N
fgenesh_scip_prom.28083.7556
Phytophthora lateralis
fgenesh_scip_prom.28083.7556
N
HpaG807764
Hyaloperonospora arabidopsidis
HpaG807764
N
maker-pag1_scaffold_106-fgenesh-gene-0.12
Pythium aphanidermatum
maker-pag1_scaffold_106-fgenesh-gene-0.12
N
maker-par_contig_313-fgenesh-gene-0.2
Pythium arrhenomanes
maker-par_contig_313-fgenesh-gene-0.2
N
maker-pir_contig_264-snap-gene-0.19
Pythium irregulare
maker-pir_contig_264-snap-gene-0.19
N
maker-piw_contig_1064-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_1064-fgenesh-gene-0.2
N
maker-pve_contig_7-fgenesh-gene-0.20
Pythium vexans
maker-pve_contig_7-fgenesh-gene-0.20
N
Physo134456
Phytophthora sojae
Physo134456
N
PITG_19220
Phytophthora infestans
PITG_19220
N
PYU1_G014859
Pythium ultimum
PYU1_G014859
N
SPRG_07821
Saprolegnia parasitica
SPRG_07821
N