CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10039989.g
(
Linum usitatissimum
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Lus10039989.g
T316098_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10039989
PLATZ
98
169
RRYVYHDVVRLEDLENLVDCTNVQAYTINNSKVVFIKKRPQNRQLKGSGNNCTSCNRGLQEPFIHCSLGCKV
Links
Other
PLATZ
family TFs
Other
Linum usitatissimum
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30090.m000247
Ricinus communis
30090.m000247
N
0.861
AMTR_s00033p00166000
Amborella trichopoda
AMTR_s00033p00166000
N
0.847
Aquca_016_00081
Aquilegia coerulea
Aquca_016_00081
N
0.847
AT2G12646
Arabidopsis thaliana
AT2G12646
N
0.833
BGIOSGA007009
Oryza indica
BGIOSGA007009
N
0.806
Bo3g087070
Brassica oleracea
Bo3g087070
N
0.847
Bo9g022400
Brassica oleracea
Bo9g022400
N
0.819
Bostr.22685s0001
Boechera stricta
Bostr.22685s0001
N
0.833
Bra013149
Brassica rapa
Bra013149
N
0.847
Bra037203
Brassica rapa
Bra037203
N
0.819
BRADI3G06190
Brachypodium distachyon
BRADI3G06190
N
0.792
Cagra.2506s0001
Capsella grandiflora
Cagra.2506s0001
N
0.833
Carubv10015124m.g
Capsella rubella
Carubv10015124m.g
N
0.833
cassava41034.m1
Manihot esculenta
cassava41034.m1
N
0.847
cassava446.valid.m1
Manihot esculenta
cassava446.valid.m1
N
0.861
Ca_06740
Cicer arietinum
Ca_06740
N
0.861
chr6.CM0037.1230.nd
Lotus japonicus
chr6.CM0037.1230.nd
N
0.806
Ciclev10010747m.g
Citrus clementina
Ciclev10010747m.g
N
0.778
Cucsa.132770
Cucumis sativus
Cucsa.132770
N
0.819
Eucgr.C00450
Eucalyptus grandis
Eucgr.C00450
N
0.847
evm.TU.supercontig_46.74
Carica papaya
evm.TU.supercontig_46.74
N
0.833
fgenesh2_kg.3__2996__AT2G12646.1
Arabidopsis lyrata
fgenesh2_kg.3__2996__AT2G12646.1
N
0.833
gene30812-v1.0-hybrid
Fragaria vesca
gene30812-v1.0-hybrid
N
0.861
GLYMA09G12330
Glycine max
GLYMA09G12330
N
0.847
GLYMA13G23360
Glycine max
GLYMA13G23360
N
0.861
GLYMA15G23920
Glycine max
GLYMA15G23920
N
0.819
GLYMA17G11470
Glycine max
GLYMA17G11470
N
0.861
Gorai.004G110400
Gossypium raimondii
Gorai.004G110400
N
0.806
Gorai.009G013500
Gossypium raimondii
Gorai.009G013500
N
0.847
Gorai.010G057300
Gossypium raimondii
Gorai.010G057300
N
0.833
GRMZM2G070295
Zea mays
GRMZM2G070295
N
0.806
GSMUA_Achr1G09990_001
Musa acuminata
GSMUA_Achr1G09990_001
N
0.847
GSMUA_Achr6G30690_001
Musa acuminata
GSMUA_Achr6G30690_001
N
0.750
GSMUA_Achr6G35220_001
Musa acuminata
GSMUA_Achr6G35220_001
N
0.764
GSMUA_Achr9G22490_001
Musa acuminata
GSMUA_Achr9G22490_001
N
0.833
LPERR02G05550
Leersia perrieri
LPERR02G05550
N
0.806
Lus10008031.g
Linum usitatissimum
Lus10008031.g
N
0.819
Lus10008814.g
Linum usitatissimum
Lus10008814.g
N
0.986
Lus10038103.g
Linum usitatissimum
Lus10038103.g
N
0.792
MDP0000639526
Malus domestica
MDP0000639526
N
0.847
mgf020898m
Mimulus guttatus
mgf020898m
N
0.806
MLOC_37403
Hordeum vulgare
MLOC_37403
N
0.792
MTR_4g116300
Medicago truncatula
MTR_4g116300
N
0.861
OB02G15630
Oryza brachyantha
OB02G15630
N
0.806
OPUNC02G05490
Oryza punctata
OPUNC02G05490
N
0.806
orange1.1g042361m.g
Citrus sinensis
orange1.1g042361m.g
N
0.778
ORGLA02G0058300
Oryza glaberrima
ORGLA02G0058300
N
0.806
OS02G0183000
Oryza sativa
OS02G0183000
N
0.806
Pavir.Aa03378
Panicum virgatum
Pavir.Aa03378
N
0.708
Pavir.Ab00641
Panicum virgatum
Pavir.Ab00641
N
0.806
Pavir.J35161
Panicum virgatum
Pavir.J35161
N
0.792
PDK_20s1316692g001
Phoenix dactylifera
PDK_20s1316692g001
N
0.764
PDK_20s1397531g003
Phoenix dactylifera
PDK_20s1397531g003
N
0.806
PGSC0003DMG400007885
Solanum tuberosum
PGSC0003DMG400007885
N
0.789
Pm027672
Prunus mume
Pm027672
N
0.861
POPTR_0006s05950
Populus trichocarpa
POPTR_0006s05950
N
0.833
POPTR_0018s12380
Populus trichocarpa
POPTR_0018s12380
N
0.847
PRUPE_ppa019806mg
Prunus persica
PRUPE_ppa019806mg
N
0.861
SapurV1A.0306s0210
Salix purpurea
SapurV1A.0306s0210
N
0.847
SapurV1A.2696s0020
Salix purpurea
SapurV1A.2696s0020
N
0.861
Sb04g005680
Sorghum bicolor
Sb04g005680
N
0.819
scaffold_303520.1
Arabidopsis lyrata
scaffold_303520.1
N
0.833
Si019544m.g
Setaria italica
Si019544m.g
N
0.806
Solyc07g007320.1
Solanum lycopersicum
Solyc07g007320.1
N
0.861
Solyc12g010470.1
Solanum lycopersicum
Solyc12g010470.1
N
0.789
TCM_038233
Theobroma cacao
TCM_038233
N
0.847
Thhalv10022828m.g
Eutrema salsugineum
Thhalv10022828m.g
N
0.847
Traes_6AS_3CC6C63F9
Triticum aestivum
Traes_6AS_3CC6C63F9
N
0.792
Traes_6BS_A7DE5BFD1
Triticum aestivum
Traes_6BS_A7DE5BFD1
N
0.792
Traes_6DS_9C50DA0DE
Triticum aestivum
Traes_6DS_9C50DA0DE
N
0.792
TRIUR3_16881
Triticum urartu
TRIUR3_16881
N
0.792
VIT_11s0118g00600
Vitis vinifera
VIT_11s0118g00600
N
0.861