CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RFX7
(
Gorilla gorilla
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02257 (RFX_DNA_binding)
IPR003150
ENSGGOG00000002118
T318269_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rfx7
M00823_2.00
Mus musculus
GTYRCYRNSB
VSNYRGYRAC
PBM
Weirauch et al.(2013)
pTH3516
0.693
0.980
Rfx7
M00187_2.00
Mus musculus
BGTHDYYRNN
NNYRRHDACV
PBM
Badis et al.(2009)
Rfxdc2_3516
0.693
0.980
RFX7
M05729_2.00
Homo sapiens
BGTTRCYRY
RYRGYAACV
SELEX
Yin et al.(2017)
RFX7_eDBD_HT-SELEX
0.693
0.980
RFX7
M05730_2.00
Homo sapiens
BGTTGCYRB
VYRGCAACV
SELEX
Yin et al.(2017)
RFX7_eDBD_Methyl-HT-SELEX
0.693
0.980
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000002086
RFX
1
56
RSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYPLPEWYCYSGLRKKA
ENSGGOP00000022048
RFX
1
50
RSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKKA
Links
Other
RFX
family TFs
Other
Gorilla gorilla
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R011989
Calypte anna
Aan_R011989
I
0.688
Afo_R011605
Aptenodytes forsteri
Afo_R011605
I
0.688
Alligator_sinensis_CCG008945.1
Alligator sinensis
Alligator_sinensis_CCG008945.1
I
0.678
Brh_R008414
Buceros rhinoceros
Brh_R008414
I
0.678
ENSAMEG00000018368
Ailuropoda melanoleuca
ENSAMEG00000018368
I
0.693
ENSAMXG00000014807
Astyanax mexicanus
ENSAMXG00000014807
I
0.689
ENSAMXG00000020093
Astyanax mexicanus
ENSAMXG00000020093
I
0.689
ENSAPLG00000005911
Anas platyrhynchos
ENSAPLG00000005911
I
0.693
ENSCPOG00000005366
Cavia porcellus
ENSCPOG00000005366
I
0.693
ENSCSAG00000011819
Chlorocebus sabaeus
ENSCSAG00000011819
I
0.693
ENSDORG00000004908
Dipodomys ordii
ENSDORG00000004908
I
0.693
ENSFALG00000012087
Ficedula albicollis
ENSFALG00000012087
I
0.693
ENSGMOG00000002477
Gadus morhua
ENSGMOG00000002477
I
0.678
ENSGMOG00000004164
Gadus morhua
ENSGMOG00000004164
I
0.685
ENSLACG00000015878
Latimeria chalumnae
ENSLACG00000015878
I
0.693
ENSLOCG00000013505
Lepisosteus oculatus
ENSLOCG00000013505
I
0.689
ENSMMUP00000033587
Macaca fascicularis
ENSMMUP00000033587
I
0.687
ENSMPUG00000002204
Mustela putorius furo
ENSMPUG00000002204
I
0.693
ENSNLEG00000006658
Nomascus leucogenys
ENSNLEG00000006658
I
0.693
ENSOARG00000020885
Ovis aries
ENSOARG00000020885
I
0.690
ENSONIG00000005780
Oreochromis niloticus
ENSONIG00000005780
I
0.672
ENSONIG00000008334
Oreochromis niloticus
ENSONIG00000008334
I
0.685
ENSP00000397644-D1
Bos grunniens
ENSP00000397644-D1
I
0.688
ENSPANG00000017297
Papio anubis
ENSPANG00000017297
I
0.693
ENSPFOG00000002938
Poecilia formosa
ENSPFOG00000002938
I
0.672
ENSPFOG00000003977
Poecilia formosa
ENSPFOG00000003977
I
0.686
ENSPMAG00000005066
Petromyzon marinus
ENSPMAG00000005066
I
0.679
ENSPPYG00000006502
Pongo abelii
ENSPPYG00000006502
I
0.693
ENSPSIG00000014731
Pelodiscus sinensis
ENSPSIG00000014731
I
0.693
ENSSHAG00000003875
Sarcophilus harrisii
ENSSHAG00000003875
I
0.693
ENSSTOG00000027249
Ictidomys tridecemlineatus
ENSSTOG00000027249
I
0.688
ENSTRUG00000000177
Takifugu rubripes
ENSTRUG00000000177
I
0.651
ENSTSYG00000002441
Tarsius syrichta
ENSTSYG00000002441
I
0.693
ENSXMAG00000003651
Xiphophorus maculatus
ENSXMAG00000003651
I
0.676
ENSXMAG00000006676
Xiphophorus maculatus
ENSXMAG00000006676
I
0.685
e_gw.237.152.1
Branchiostoma floridae
e_gw.237.152.1
I
0.657
Gfo_R004305
Geospiza fortis
Gfo_R004305
I
0.688
Myotis_brandtii_RFX7_10006263
Myotis brandtii
Myotis_brandtii_RFX7_10006263
I
0.687
Pvit_17399
Pogona vitticeps
Pvit_17399
I
0.682
rfx5
Tetraodon nigroviridis
ENSTNIG00000005388
I
0.651
RFX7
Takifugu rubripes
ENSTRUG00000008008
I
0.679
RFX7
Callithrix jacchus
ENSCJAG00000002163
I
0.694
RFX7
Tetraodon nigroviridis
ENSTNIG00000013706
I
0.679
rfx7
Tetraodon nigroviridis
ENSTNIG00000009322
I
0.676
rfx7
Danio rerio
ENSDARG00000077237
I
0.684
RFX7
Choloepus hoffmanni
ENSCHOG00000003451
I
0.693
RFX7
Taeniopygia guttata
ENSTGUG00000006356
I
0.688
RFX7
Canis familiaris
ENSCAFG00000016029
I
0.693
RFX7
Bos taurus
ENSBTAG00000000565
I
0.693
rfx7
Takifugu rubripes
ENSTRUG00000017897
I
0.669
RFX7
Pteropus vampyrus
ENSPVAG00000005381
I
0.693
RFX7
Tursiops truncatus
ENSTTRG00000010051
I
0.693
RFX7
Vicugna pacos
ENSVPAG00000012402
I
0.693
RFX7
Sus scrofa
ENSSSCG00000004603
I
0.691
rfx7
Xenopus tropicalis
XB-GENE-1008447
I
0.693
Rfx7
Mus musculus
ENSMUSG00000037674
D
0.693
RFX7
Gasterosteus aculeatus
ENSGACG00000006090
I
0.685
RFX7
Homo sapiens
ENSG00000181827
D
0.693
RFX7
Felis catus
ENSFCAG00000029408
I
0.693
RFX7
Loxodonta africana
ENSLAFG00000018745
I
0.693
RFX7
Echinops telfairi
ENSETEG00000015037
I
0.688
RFX7
Meleagris gallopavo
ENSMGAG00000005745
I
0.693
RFX7
Microcebus murinus
ENSMICG00000000614
I
0.679
RFX7
Myotis lucifugus
ENSMLUG00000028676
I
0.690
RFX7
Macaca mulatta
ENSMMUG00000017801
I
0.687
RFX7
Monodelphis domestica
ENSMODG00000008136
I
0.693
RFX7
Erinaceus europaeus
ENSEEUG00000013718
I
0.678
RFX7
Sorex araneus
ENSSARG00000010801
I
0.687
RFX7
Equus caballus
ENSECAG00000002379
I
0.688
RFX7
Ornithorhynchus anatinus
ENSOANG00000008526
I
0.693
RFX7
Dasypus novemcinctus
ENSDNOG00000044983
I
0.693
RFX7
Oryctolagus cuniculus
ENSOCUG00000013678
I
0.693
RFX7
Otolemur garnettii
ENSOGAG00000031795
I
0.690
RFX7
Danio rerio
ENSDARG00000103691
I
0.689
RFX7
Anolis carolinensis
ENSACAG00000008482
I
0.693
RFX7
Oryzias latipes
ENSORLG00000005342
I
0.685
rfx7
Oryzias latipes
ENSORLG00000008583
I
0.678
RFX7
Procavia capensis
ENSPCAG00000004974
I
0.693
RFX7
Pan troglodytes
ENSPTRG00000007104
I
0.693
rfx7
Gasterosteus aculeatus
ENSGACG00000015838
I
0.681
Rfx7
Rattus norvegicus
ENSRNOG00000060367
I
0.693
SPU_027998
Strongylocentrotus purpuratus
SPU_027998
I
0.656
Tal_R011248
Tyto alba
Tal_R011248
I
0.689