HPODL_00388 (Ogataea parapolymorpha)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 HPODL_00388 T318646_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.679 0.449
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.679 0.449
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.679 0.449
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.679 0.449
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.679 0.449
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESX00974 RFX 220 297

Links

Other RFX family TFs
Other Ogataea parapolymorpha TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.679
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.679
A1O1_08600 Capronia coronata A1O1_08600 I 0.672
A1O3_08026 Capronia epimyces A1O3_08026 I 0.671
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.672
A1O7_03561 Cladophialophora yegresii A1O7_03561 I 0.670
A1O9_03272 Exophiala aquamarina A1O9_03272 I 0.667
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.668
AB07822.1 Alternaria brassicicola AB07822.1 I 0.673
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.660
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.662
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.660
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.668
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.659
AOL_s00215g602 Arthrobotrys oligospora AOL_s00215g602 I 0.672
ARB_07111 Arthroderma benhamiae ARB_07111 I 0.665
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.660
AUEXF2481DRAFT_78728 Aureobasidium subglaciale AUEXF2481DRAFT_78728 I 0.670
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.663
BBA_07182 Beauveria bassiana BBA_07182 I 0.655
Bcin03g02360 Botrytis cinerea Bcin03g02360 I 0.657
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.663
BN7_2967 Wickerhamomyces ciferrii BN7_2967 I 0.701
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.660
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.660
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.660
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.668
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.681
CaO19.11346 Candida albicans CaO19.11346 I 0.687
CaO19.3865 Candida albicans CaO19.3865 I 0.687
CCM_03895 Cordyceps militaris CCM_03895 I 0.654
CD36_31600 Candida dubliniensis CD36_31600 I 0.687
CFIO01_07583 Colletotrichum fioriniae CFIO01_07583 I 0.656
CGGC5_15149 Colletotrichum gloeosporioides CGGC5_15149 I 0.658
CH063_09103 Colletotrichum higginsianum CH063_09103 I 0.656
CIMG_05985 Coccidioides immitis CIMG_05985 I 0.660
CLUG_05348 Candida lusitaniae CLUG_05348 I 0.654
CLUG_05348 Clavispora lusitaniae CLUG_05348 I 0.654
CMQ_5960 Grosmannia clavigera CMQ_5960 I 0.656
Cob_11986 Colletotrichum orbiculare Cob_11986 I 0.656
COCC4DRAFT_162970 Bipolaris maydis COCC4DRAFT_162970 I 0.672
COCCADRAFT_29061 Bipolaris zeicola COCCADRAFT_29061 I 0.672
COCMIDRAFT_23254 Bipolaris oryzae COCMIDRAFT_23254 I 0.672
COCSADRAFT_34318 Bipolaris sorokiniana COCSADRAFT_34318 I 0.672
COCVIDRAFT_40879 Bipolaris victoriae COCVIDRAFT_40879 I 0.672
CORT_0D05100 Candida orthopsilosis CORT_0D05100 I 0.678
CPAG_04140 Candida parapsilosis CPAG_04140 I 0.678
CPC735_025690 Coccidioides posadasii CPC735_025690 I 0.660
CPUR_03868 Claviceps purpurea CPUR_03868 I 0.657
CSUB01_01029 Colletotrichum sublineola CSUB01_01029 I 0.655
CTHT_0028340 Chaetomium thermophilum CTHT_0028340 I 0.657
CTRG_00624 Candida tropicalis CTRG_00624 I 0.683
DEHA2G10868g Debaryomyces hansenii DEHA2G10868g I 0.684
DILT_0001462801 Diphyllobothrium latum DILT_0001462801 I 0.658
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.663
DRE_06212 Drechslerella stenobrocha DRE_06212 I 0.671
EPUS_04947 Endocarpon pusillum EPUS_04947 I 0.672
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.665
estExt_fgenesh2_pg.C_10713 Neurospora discreta estExt_fgenesh2_pg.C_10713 I 0.659
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.674
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.660
EV44_g5273 Erysiphe necator EV44_g5273 I 0.657
e_gw1.6.922.1 Nectria haematococca e_gw1.6.922.1 I 0.656
F503_07504 Ophiostoma piceae uamh F503_07504 I 0.655
FFUJ_02499 Fusarium fujikuroi FFUJ_02499 I 0.654
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.660
fgenesh1_pg.C_scaffold_1001176 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1001176 I 0.661
FGRRES_07420 Fusarium graminearum FGRRES_07420 I 0.655
FOXG_01471 Fusarium oxysporum FOXG_01471 I 0.654
FVEG_07837 Fusarium verticillioides FVEG_07837 I 0.654
G210_0560 Candida maltosa G210_0560 I 0.690
G647_04815 Cladophialophora carrionii G647_04815 I 0.671
GGTG_07952 Gaeumannomyces graminis GGTG_07952 I 0.654
GLRG_03233 Colletotrichum graminicola GLRG_03233 I 0.657
GMDG_00789 Pseudogymnoascus destructans GMDG_00789 I 0.656
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.683
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.683
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.653
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.664
H072_327 Dactylellina haptotyla H072_327 I 0.672
H101_06747 Trichophyton interdigitale H101_06747 I 0.665
H102_04304 Trichophyton rubrum H102_04304 I 0.665
H105_04329 Trichophyton soudanense H105_04329 I 0.665
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.661
HelroG82191 Helobdella robusta HelroG82191 I 0.652
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.672
HMPREF1541_04667 Cyphellophora europaea HMPREF1541_04667 I 0.662
HMPREF1624_04412 Sporothrix schenckii HMPREF1624_04412 I 0.655
KAFR_0H03130 Kazachstania africana KAFR_0H03130 I 0.670
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.689
KLTH0H12144g Lachancea thermotolerans KLTH0H12144g I 0.671
KLTH0H12144g Kluyveromyces thermotolerans KLTH0H12144g I 0.671
KNAG_0I01300 Kazachstania naganishii KNAG_0I01300 I 0.686
Kpol_457p14 Vanderwaltozyma polyspora Kpol_457p14 I 0.669
KUCA_T00003838001 Kuraishia capsulata KUCA_T00003838001 I 0.661
Kwal_214 Kluyveromyces waltii Kwal_214 I 0.671
L798_03671 Zootermopsis nevadensis L798_03671 I 0.652
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.671
LELG_03203 Lodderomyces elongisporus LELG_03203 I 0.688
LEMA_P019700.1 Leptosphaeria maculans LEMA_P019700.1 I 0.667
M437DRAFT_81253 Aureobasidium melanogenum M437DRAFT_81253 I 0.670
M438DRAFT_393589 Aureobasidium pullulans M438DRAFT_393589 I 0.670
MAC_02434 Metarhizium acridum MAC_02434 I 0.658
MAJ_05697 Metarhizium majus MAJ_05697 I 0.657
MAM_06665 Metarhizium album MAM_06665 I 0.658
MANI_023048 Metarhizium anisopliae MANI_023048 I 0.657
MAPG_07750 Magnaporthe poae MAPG_07750 I 0.654
MBM_03129 Marssonina brunnea MBM_03129 I 0.656
MBR_03889 Metarhizium brunneum MBR_03889 I 0.657
MCYG_06867 Microsporum canis MCYG_06867 I 0.665
MCYG_06867 Arthroderma otae MCYG_06867 I 0.665
MGU_07283 Metarhizium guizhouense MGU_07283 I 0.657
MGYG_03742 Microsporum gypseum MGYG_03742 I 0.665
MPH_13091 Macrophomina phaseolina MPH_13091 I 0.674
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.664
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.665
MYCTH_2301302 Myceliophthora thermophila MYCTH_2301302 I 0.656
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.687
NCU06701 Neurospora crassa NCU06701 I 0.655
NDAI_0G04240 Naumovozyma dairenensis NDAI_0G04240 I 0.689
NechaG49316 Fusarium solani NechaG49316 I 0.656
NEUTE1DRAFT_119738 Neurospora tetrasperma NEUTE1DRAFT_119738 I 0.655
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.660
OCS_02678 Ophiocordyceps sinensis OCS_02678 I 0.655
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.664
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.663
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.685
Pc20g01690 Penicillium chrysogenum Pc20g01690 I 0.660
PCH_Pc20g01690 Penicillium rubens PCH_Pc20g01690 I 0.660
PDE_02161 Penicillium oxalicum PDE_02161 I 0.660
PDIP_47410 Penicillium digitatum PDIP_47410 I 0.660
PEX1_087840 Penicillium expansum PEX1_087840 I 0.660
PFICI_07890 Pestalotiopsis fici PFICI_07890 I 0.654
PGUG_04792 Candida guilliermondii PGUG_04792 I 0.666
PGUG_04792 Meyerozyma guilliermondii PGUG_04792 I 0.666
PICST_78645 Scheffersomyces stipitis PICST_78645 I 0.677
PITC_028740 Penicillium italicum PITC_028740 I 0.660
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.661
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.661
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.672
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.672
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.672
PTRG_01267 Pyrenophora triticirepentis PTRG_01267 I 0.671
PTT_09109 Pyrenophora teres PTT_09109 I 0.670
PV04_03763 Capronia semiimmersa PV04_03763 I 0.670
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.672
PV06_00023 Exophiala oligosperma PV06_00023 I 0.672
PV07_06647 Cladophialophora immunda PV07_06647 I 0.671
PV08_04071 Exophiala spinifera PV08_04071 I 0.672
PV09_00065 Verruconis gallopava PV09_00065 I 0.665
PV10_05596 Exophiala mesophila PV10_05596 I 0.669
PV11_01295 Exophiala sideris PV11_01295 I 0.671
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.661
RFX1 Saccharomyces cerevisiae YLR176C D 0.679
S40285_05794 Stachybotrys chlorohalonata S40285_05794 I 0.658
S40288_01173 Stachybotrys chartarum S40288_01173 I 0.658
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.672
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.674
SAPIO_CDS9685 Scedosporium apiospermum SAPIO_CDS9685 I 0.654
SBOR_6602 Sclerotinia borealis SBOR_6602 I 0.657
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.687
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.664
SETTUDRAFT_147537 Setosphaeria turcica SETTUDRAFT_147537 I 0.672
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.668
SNOG_15366 Stagonospora nodorum SNOG_15366 I 0.667
SNOG_15366 Phaeosphaeria nodorum SNOG_15366 I 0.667
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.671
SPAPADRAFT_70246 Spathaspora passalidarum SPAPADRAFT_70246 I 0.675
SPBR_05608 Sporothrix brasiliensis SPBR_05608 I 0.655
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.670
SS1G_00575 Sclerotinia sclerotiorum SS1G_00575 I 0.657
TBLA_0C01490 Tetrapisispora blattae TBLA_0C01490 I 0.676
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.679
TEQG_02965 Trichophyton equinum TEQG_02965 I 0.665
TESG_00180 Trichophyton tonsurans TESG_00180 I 0.665
tetur19g03130 Tetranychus urticae tetur19g03130 I 0.654
THITE_2107553 Thielavia terrestris THITE_2107553 I 0.657
TPHA_0B03750 Tetrapisispora phaffii TPHA_0B03750 I 0.671
TRIATDRAFT_83492 Trichoderma atroviride TRIATDRAFT_83492 I 0.658
TRIREDRAFT_69349 Trichoderma reesei TRIREDRAFT_69349 I 0.655
TRIVIDRAFT_34449 Trichoderma virens TRIVIDRAFT_34449 I 0.655
TRV_04907 Trichophyton verrucosum TRV_04907 I 0.665
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.661
U727_0043066021 Penicillium solitum U727_0043066021 I 0.660
UCRPA7_1505 Togninia minima UCRPA7_1505 I 0.655
UREG_04378 Uncinocarpus reesii UREG_04378 I 0.660
V499_05779 Pseudogymnoascus pannorum V499_05779 I 0.656
VDAG_01397 Verticillium dahliae VDAG_01397 I 0.658
VDBG_04171 Verticillium albo atrum VDBG_04171 I 0.658
VDBG_04171 Verticillium alfalfae VDBG_04171 I 0.658
VHEMI10038 Torrubiella hemipterigena VHEMI10038 I 0.658
W97_05844 Coniosporium apollinis W97_05844 I 0.656
X797_002751 Metarhizium robertsii X797_002751 I 0.657
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.685
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.686
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.672
Z518_01660 Rhinocladiella mackenziei Z518_01660 I 0.670
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.689
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.689
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.696