CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DILT_0001462801
(
Diphyllobothrium latum
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02257 (RFX_DNA_binding)
IPR003150
DILT_0001462801
T319179_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rfx7
M00823_2.00
Mus musculus
GTYRCYRNSB
VSNYRGYRAC
PBM
Weirauch et al.(2013)
pTH3516
0.655
0.241
Rfx7
M00187_2.00
Mus musculus
BGTHDYYRNN
NNYRRHDACV
PBM
Badis et al.(2009)
Rfxdc2_3516
0.655
0.241
RFX7
M05729_2.00
Homo sapiens
BGTTRCYRY
RYRGYAACV
SELEX
Yin et al.(2017)
RFX7_eDBD_HT-SELEX
0.655
0.241
RFX7
M05730_2.00
Homo sapiens
BGTTGCYRB
VYRGCAACV
SELEX
Yin et al.(2017)
RFX7_eDBD_Methyl-HT-SELEX
0.655
0.241
daf-19
M00709_2.00
Caenorhabditis elegans
SGTTRCTADG
CHTAGYAACS
PBM
Narasimhan et al.(2015)
pTH10021
0.651
0.266
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DILT_0001462801-mRNA-1
RFX
433
514
REFAMFWLNKNYQVHPQSSFPRVQIYADYQKAHQQNLIPGSALSAGEFHVVIKSMFPLVDQVKVLVPNGNVEIHYNKLKHVD
Links
Other
RFX
family TFs
Other
Diphyllobothrium latum
TFs
137 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCUD_0002149801
Schistosoma curassoni
SCUD_0002149801
N
0.700
SMTD_0001942901
Schistosoma mattheei
SMTD_0001942901
N
0.700
SROB_0002099101
Schistosoma rodhaini
SROB_0002099101
N
0.700
csin102651
Clonorchis sinensis
csin102651
N
0.693
D915_07634
Fasciola hepatica
D915_07634
N
0.672
PXEA_0002157901
Protopolystoma xenopodis
PXEA_0002157901
N
0.671
RFX7
Myotis lucifugus
ENSMLUG00000028676
I
0.660
ENSOARG00000020885
Ovis aries
ENSOARG00000020885
I
0.658
RFX7
Otolemur garnettii
ENSOGAG00000031795
I
0.658
RFX7
Tetraodon nigroviridis
ENSTNIG00000013706
I
0.658
RFX7
Takifugu rubripes
ENSTRUG00000008008
I
0.658
HPODL_00388
Ogataea parapolymorpha
HPODL_00388
I
0.658
HelroG82191
Helobdella robusta
HelroG82191
I
0.657
SPU_027998
Strongylocentrotus purpuratus
SPU_027998
I
0.657
ZYRO0E04642g
Zygosaccharomyces rouxii
ZYRO0E04642g
I
0.657
e_gw.237.152.1
Branchiostoma floridae
e_gw.237.152.1
I
0.657
BDDG_02784
Blastomyces dermatitidis
BDDG_02784
I
0.656
DACRYDRAFT_45233
Dacryopinax sp
DACRYDRAFT_45233
I
0.656
RFX7
Homo sapiens
ENSG00000181827
D
0.656
RFX7
Gasterosteus aculeatus
ENSGACG00000006090
I
0.656
ENSGMOG00000004164
Gadus morhua
ENSGMOG00000004164
I
0.656
ENSONIG00000008334
Oreochromis niloticus
ENSONIG00000008334
I
0.656
RFX7
Oryzias latipes
ENSORLG00000005342
I
0.656
RFX7
Pteropus vampyrus
ENSPVAG00000005381
I
0.656
ENSXMAG00000006676
Xiphophorus maculatus
ENSXMAG00000006676
I
0.656
ENSP00000397644-D1
Bos grunniens
ENSP00000397644-D1
I
0.656
LDEC011897
Leptinotarsa decemlineata
LDEC011897
I
0.656
CBG00885
Caenorhabditis briggsae
CBG00885
I
0.655
RFX7
Anolis carolinensis
ENSACAG00000008482
I
0.655
ENSAMEG00000018368
Ailuropoda melanoleuca
ENSAMEG00000018368
I
0.655
ENSAMXG00000014807
Astyanax mexicanus
ENSAMXG00000014807
I
0.655
ENSAPLG00000005911
Anas platyrhynchos
ENSAPLG00000005911
I
0.655
RFX7
Bos taurus
ENSBTAG00000000565
I
0.655
RFX7
Canis familiaris
ENSCAFG00000016029
I
0.655
RFX7
Choloepus hoffmanni
ENSCHOG00000003451
I
0.655
ENSCPOG00000005366
Cavia porcellus
ENSCPOG00000005366
I
0.655
ENSCSAG00000011819
Chlorocebus sabaeus
ENSCSAG00000011819
I
0.655
rfx7
Danio rerio
ENSDARG00000077237
I
0.655
RFX7
Danio rerio
ENSDARG00000103691
I
0.655
RFX7
Dasypus novemcinctus
ENSDNOG00000044983
I
0.655
RFX7
Equus caballus
ENSECAG00000002379
I
0.655
ENSFALG00000012087
Ficedula albicollis
ENSFALG00000012087
I
0.655
ENSLACG00000015878
Latimeria chalumnae
ENSLACG00000015878
I
0.655
RFX7
Loxodonta africana
ENSLAFG00000018745
I
0.655
RFX7
Meleagris gallopavo
ENSMGAG00000005745
I
0.655
RFX7
Monodelphis domestica
ENSMODG00000008136
I
0.655
ENSMPUG00000002204
Mustela putorius furo
ENSMPUG00000002204
I
0.655
Rfx7
Mus musculus
ENSMUSG00000037674
D
0.655
ENSNLEG00000006658
Nomascus leucogenys
ENSNLEG00000006658
I
0.655
RFX7
Ornithorhynchus anatinus
ENSOANG00000008526
I
0.655
RFX7
Oryctolagus cuniculus
ENSOCUG00000013678
I
0.655
ENSPANG00000017297
Papio anubis
ENSPANG00000017297
I
0.655
RFX7
Procavia capensis
ENSPCAG00000004974
I
0.655
ENSPPYG00000006502
Pongo abelii
ENSPPYG00000006502
I
0.655
ENSPSIG00000014731
Pelodiscus sinensis
ENSPSIG00000014731
I
0.655
RFX7
Pan troglodytes
ENSPTRG00000007104
I
0.655
Rfx7
Rattus norvegicus
ENSRNOG00000060367
I
0.655
ENSSHAG00000003875
Sarcophilus harrisii
ENSSHAG00000003875
I
0.655
RFX7
Taeniopygia guttata
ENSTGUG00000006356
I
0.655
ENSTSYG00000002441
Tarsius syrichta
ENSTSYG00000002441
I
0.655
RFX7
Vicugna pacos
ENSVPAG00000012402
I
0.655
O9G_004738
Rozella allomycis
O9G_004738
I
0.655
PAS_chr2-2_0153
Komagataella pastoris
PAS_chr2-2_0153
I
0.655
Aan_R011989
Calypte anna
Aan_R011989
I
0.655
Afo_R011605
Aptenodytes forsteri
Afo_R011605
I
0.655
Gfo_R004305
Geospiza fortis
Gfo_R004305
I
0.655
Myotis_brandtii_RFX7_10006263
Myotis brandtii
Myotis_brandtii_RFX7_10006263
I
0.655
rfx7
Xenopus tropicalis
XB-GENE-1008447
I
0.655
XP_002492053.1
Pichia pastoris
XP_002492053.1
I
0.655
MCYG_06867
Microsporum canis
MCYG_06867
I
0.654
ARB_07111
Arthroderma benhamiae
ARB_07111
I
0.654
ENSAMXG00000020093
Astyanax mexicanus
ENSAMXG00000020093
I
0.654
RFX7
Felis catus
ENSFCAG00000029408
I
0.654
ENSLOCG00000013505
Lepisosteus oculatus
ENSLOCG00000013505
I
0.654
H101_06747
Trichophyton interdigitale
H101_06747
I
0.654
H102_04304
Trichophyton rubrum
H102_04304
I
0.654
H105_04329
Trichophyton soudanense
H105_04329
I
0.654
MCYG_06867
Arthroderma otae
MCYG_06867
I
0.654
MGYG_03742
Microsporum gypseum
MGYG_03742
I
0.654
TDEL_0B05980
Torulaspora delbrueckii
TDEL_0B05980
I
0.654
TEQG_02965
Trichophyton equinum
TEQG_02965
I
0.654
TESG_00180
Trichophyton tonsurans
TESG_00180
I
0.654
TRV_04907
Trichophyton verrucosum
TRV_04907
I
0.654
Alligator_sinensis_CCG008945.1
Alligator sinensis
Alligator_sinensis_CCG008945.1
I
0.654
Brh_R008414
Buceros rhinoceros
Brh_R008414
I
0.654
csin102559
Clonorchis sinensis
csin102559
I
0.654
T265_11740
Opisthorchis viverrini
T265_11740
I
0.654
BGIBMGA007758
Bombyx mori
BGIBMGA007758
I
0.653
RFX7
Macaca mulatta
ENSMMUG00000017801
I
0.653
ENSPMAG00000005066
Petromyzon marinus
ENSPMAG00000005066
I
0.653
RFX7
Sorex araneus
ENSSARG00000010801
I
0.653
LELG_03203
Lodderomyces elongisporus
LELG_03203
I
0.653
PAAG_00480
Paracoccidioides sp lutzii
PAAG_00480
I
0.653
PABG_06744
Paracoccidioides brasiliensis
PABG_06744
I
0.653
ENSMMUP00000033587
Macaca fascicularis
ENSMMUP00000033587
I
0.653
Pvit_17399
Pogona vitticeps
Pvit_17399
I
0.653
GPLIN_000191300
Globodera pallida
GPLIN_000191300
I
0.653
CBN23481
Caenorhabditis brenneri
CBN23481
I
0.652
CBN31487
Caenorhabditis brenneri
CBN31487
I
0.652
CRE04304
Caenorhabditis remanei
CRE04304
I
0.652
ENSGMOG00000002477
Gadus morhua
ENSGMOG00000002477
I
0.652
RFX7
Tursiops truncatus
ENSTTRG00000010051
I
0.652
L798_03671
Zootermopsis nevadensis
L798_03671
I
0.652
PVAR5_6603
Byssochlamys spectabilis
PVAR5_6603
I
0.652
TC008959
Tribolium castaneum
TC008959
I
0.652
CIMG_05985
Coccidioides immitis
CIMG_05985
I
0.651
ACLA_009440
Aspergillus clavatus
CADACLAG00001004
I
0.651
CADAFLAG00010851
Aspergillus flavus
CADAFLAG00010851
I
0.651
AFUA_5G06120
Aspergillus fumigatus
CADAFUAG00006202
I
0.651
CADANGAG00013568
Aspergillus niger
CADANGAG00013568
I
0.651
ANIA_02296
Aspergillus nidulans
CADANIAG00008989
I
0.651
CADAORAG00004061
Aspergillus oryzae
CADAORAG00004061
I
0.651
ATEG_09416
Aspergillus terreus
CADATEAG00008983
I
0.651
NFIA_036980
Neosartorya fischeri
CADNFIAG00003299
I
0.651
CPC735_025690
Coccidioides posadasii
CPC735_025690
I
0.651
EURHEDRAFT_516724
Aspergillus ruber
EURHEDRAFT_516724
I
0.651
HCBG_05483
Histoplasma capsulatum
HCBG_05483
I
0.651
KNAG_0I01300
Kazachstania naganishii
KNAG_0I01300
I
0.651
MCINX003210
Melitaea cinxia
MCINX003210
I
0.651
NDAI_0G04240
Naumovozyma dairenensis
NDAI_0G04240
I
0.651
PCH_Pc20g01690
Penicillium rubens
PCH_Pc20g01690
I
0.651
PDE_02161
Penicillium oxalicum
PDE_02161
I
0.651
PDIP_47410
Penicillium digitatum
PDIP_47410
I
0.651
PEX1_087840
Penicillium expansum
PEX1_087840
I
0.651
PITC_028740
Penicillium italicum
PITC_028740
I
0.651
PMAA_084960
Talaromyces marneffei
PMAA_084960
I
0.651
TSTA_119980
Talaromyces stipitatus
TSTA_119980
I
0.651
U727_0043066021
Penicillium solitum
U727_0043066021
I
0.651
UREG_04378
Uncinocarpus reesii
UREG_04378
I
0.651
daf-19
Caenorhabditis elegans
WBGene00000914
D
0.651
SMU15029830
Schmidtea mediterranea
SMU15029830
I
0.651
fgenesh1_pg.00162_#_176
Aspergillus carbonarius
fgenesh1_pg.00162_#_176
I
0.651
Pc20g01690
Penicillium chrysogenum
Pc20g01690
I
0.651
PMAA_084960
Penicillium marneffei
PMAA_084960
I
0.651
HMEL011744
Heliconius melpomene
HMEL011744
I
0.650
KAFR_0I02180
Kazachstania africana
KAFR_0I02180
I
0.650
ECPE_0000690401
Echinostoma caproni
ECPE_0000690401
I
0.650