RUNX3 (Ochotona princeps)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSOPRG00000011273 T319453_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		1.000 1.000
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		1.000 1.000
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		1.000 1.000
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		1.000 1.000
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		1.000 1.000
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		1.000 1.000
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		1.000 1.000
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		1.000 1.000
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		1.000 1.000
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		1.000 1.000
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		1.000 1.000
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		1.000 1.000
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.946 0.946
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.946 0.946
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.946 0.946
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.946 0.946
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.946 0.946
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.946 0.946
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.946 0.946
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.946 0.946
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.946 0.946
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.946 0.946
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.946 0.946
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.946 0.946
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.931 0.931
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.931 0.931
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.931 0.931
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.931 0.931
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.931 0.931
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.931 0.931
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.931 0.931
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.931 0.931
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.931 0.931
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.931 0.931
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.931 0.931
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.931 0.931
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.715 0.715
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.715 0.715
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.715 0.715
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.715 0.715
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000010284 Runt 73 202

Links

Other Runt family TFs
Other Ochotona princeps TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006160 Aedes aegypti AAEL006160 I 0.777
AAEL007036 Aedes aegypti AAEL007036 I 0.000
AALB007753 Anopheles albimanus AALB007753 I 0.000
AARA011332 Anopheles arabiensis AARA011332 I 0.753
AATE002063 Anopheles atroparvus AATE002063 I 0.777
ACEP16391 Atta cephalotes ACEP16391 I 0.000
ACEP16397 Atta cephalotes ACEP16397 I 0.000
ACEP16409 Atta cephalotes ACEP16409 I 0.000
ACUA000036 Anopheles culicifacies ACUA000036 I 0.000
ACUA002933 Anopheles culicifacies ACUA002933 I 0.000
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.731
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.738
ADIR001029 Anopheles dirus ADIR001029 I 0.000
ADIR002675 Anopheles dirus ADIR002675 I 0.000
AEPI011470 Anopheles epiroticus AEPI011470 I 0.000
AFAF001885 Anopheles farauti AFAF001885 N 0.000
AFAF002111 Anopheles farauti AFAF002111 I 0.000
AFUN005474 Anopheles funestus AFUN005474 I 0.000
AFUN010424 Anopheles funestus AFUN010424 I 0.000
AMEC011614 Anopheles melas AMEC011614 I 0.000
AMEM009849 Anopheles merus AMEM009849 N 0.000
AMIN005760 Anopheles minimus AMIN005760 I 0.000
AQUA008686 Anopheles quadriannulatus AQUA008686 I 0.000
ASIS002518 Anopheles sinensis ASIS002518 I 0.000
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.777
BGIBMGA008970 Bombyx mori BGIBMGA008970 I 0.733
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.762
CLEC011116 Cimex lectularius CLEC011116 I 0.000
CLEC011123 Cimex lectularius CLEC011123 I 0.000
CLEC011127 Cimex lectularius CLEC011127 I 0.000
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I 0.938
CPIJ006369 Culex quinquefasciatus CPIJ006369 I 0.000
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.000
CPIJ016826 Culex quinquefasciatus CPIJ016826 I 0.000
CpipJ_CPIJ006369 Culex pipiens CpipJ_CPIJ006369 I 0.000
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.000
CpipJ_CPIJ016826 Culex pipiens CpipJ_CPIJ016826 I 0.000
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I 0.931
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I 0.915
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.892
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.923
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I 0.923
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.992
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.938
ENSSSCG00000025261 Sus scrofa ENSSSCG00000025261 I 0.715
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.908
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.708
GD17495 Drosophila simulans FBgn0189047 I 0.708
GE17890 Drosophila yakuba FBgn0235328 I 0.708
GF15967 Drosophila ananassae FBgn0092990 I 0.708
Gfo_R015914 Geospiza fortis Gfo_R015914 I 0.000
GG19691 Drosophila erecta FBgn0111893 I 0.708
GH17737 Drosophila grimshawi FBgn0125207 I 0.708
GI15484 Drosophila mojavensis FBgn0138233 I 0.000
GJ19245 Drosophila virilis FBgn0206390 I 0.708
GK19810 Drosophila willistoni FBgn0221808 I 0.708
GL15800 Drosophila persimilis FBgn0153404 I 0.708
GM23044 Drosophila sechellia FBgn0177912 I 0.708
HMEL009843 Heliconius melpomene HMEL009843 I 0.779
HMEL014738 Heliconius melpomene HMEL014738 I 0.000
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.738
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.762
ISCW023333 Ixodes scapularis ISCW023333 I 0.000
KGM_02818 Danaus plexippus KGM_02818 I 0.000
LCUP002652 Lucilia cuprina LCUP002652 I 0.000
LCUP002657 Lucilia cuprina LCUP002657 I 0.000
LDEC003023 Leptinotarsa decemlineata LDEC003023 I 0.000
LDEC006650 Leptinotarsa decemlineata LDEC006650 I 0.000
LDEC020505 Leptinotarsa decemlineata LDEC020505 I 0.000
LLOJ002049 Lutzomyia longipalpis LLOJ002049 I 0.737
MCINX000302 Melitaea cinxia MCINX000302 I 0.746
MESCA007079 Megaselia scalaris MESCA007079 I 0.000
Ocbimv22002042m.g Octopus bimaculoides Ocbimv22002042m.g I 0.000
PHUM333310 Pediculus humanus PHUM333310 I 0.000
PPAI005889 Phlebotomus papatasi PPAI005889 I 0.000
PPAI010985 Phlebotomus papatasi PPAI010985 I 0.000
Pvit_01165 Pogona vitticeps Pvit_01165 I 0.938
RPRC000026 Rhodnius prolixus RPRC000026 I 0.000
RPRC005391 Rhodnius prolixus RPRC005391 I 0.762
runx1 Danio rerio ENSDARG00000087646 I 0.000
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.923
RUNX1 Homo sapiens ENSG00000159216 D 0.931
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.938
Runx1 Mus musculus ENSMUSG00000022952 D 0.931
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.938
runx1 Takifugu rubripes ENSTRUG00000012611 I 0.869
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.908
RUNX2 Anolis carolinensis ENSACAG00000013003 I 0.938
RUNX2 Homo sapiens ENSG00000124813 D 0.946
Runx2 Mus musculus ENSMUSG00000039153 D 0.946
RUNX2 Pteropus vampyrus ENSPVAG00000001720 I 0.000
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I 0.938
runx2 Takifugu rubripes ENSTRUG00000003501 I 0.931
runx2a Danio rerio ENSDARG00000040261 I 0.954
runx2b Danio rerio ENSDARG00000059233 I 0.931
runx2b Gasterosteus aculeatus ENSGACG00000012322 I 0.923
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.977
RunxB Drosophila melanogaster FBgn0259162 I 0.708
SBAD_0000678401 Soboliphyme baturini SBAD_0000678401 N 0.000
SINV13317 Solenopsis invicta SINV13317 I 0.762
SINV13345 Solenopsis invicta SINV13345 I 0.000
SMAR009403 Strigamia maritima SMAR009403 I 0.000
TC006536 Tribolium castaneum TC006536 I 0.769
TC006542 Tribolium castaneum TC006542 I 0.723
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.738
XP_002939386 Xenopus tropicalis XP_002939386 I 0.923
XP_002939387 Xenopus tropicalis XP_002939387 I 0.923
YQE_12216 Dendroctonus ponderosae YQE_12216 I 0.700