GK19815 (Drosophila willistoni)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 FBgn0221813 T319560_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		1.000 1.000
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.723 0.723
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.723 0.723
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.723 0.723
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0248958 Runt 135 264

Links

Other Runt family TFs
Other Drosophila willistoni TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28779.m000140 Ricinus communis 28779.m000140 I 0.000
AT1G19490 Arabidopsis thaliana AT1G19490 D 0.000
BGIOSGA034827 Oryza indica BGIOSGA034827 N 0.000
Bo5g027510 Brassica oleracea Bo5g027510 I 0.000
Bostr.7128s0552 Boechera stricta Bostr.7128s0552 I 0.000
Bra025743 Brassica rapa Bra025743 I 0.000
Cagra.1961s0053 Capsella grandiflora Cagra.1961s0053 I 0.000
Carubv10011417m.g Capsella rubella Carubv10011417m.g I 0.000
cassava31755.valid.m1 Manihot esculenta cassava31755.valid.m1 I 0.000
Ca_00780 Cicer arietinum Ca_00780 I 0.000
Ciclev10013541m.g Citrus clementina Ciclev10013541m.g I 0.000
Cla017983 Citrullus lanatus Cla017983 I 0.000
Cucsa.240980 Cucumis sativus Cucsa.240980 I 0.000
evm.TU.supercontig_5.51 Carica papaya evm.TU.supercontig_5.51 I 0.000
gene30252-v1.0-hybrid Fragaria vesca gene30252-v1.0-hybrid I 0.000
GLYMA03G35101 Glycine max GLYMA03G35101 I 0.000
GLYMA19G37801 Glycine max GLYMA19G37801 I 0.000
Gorai.009G405400 Gossypium raimondii Gorai.009G405400 I 0.000
GSMUA_Achr5G17460_001 Musa acuminata GSMUA_Achr5G17460_001 N 0.000
LPERR11G02970 Leersia perrieri LPERR11G02970 N 0.000
Lus10003255.g Linum usitatissimum Lus10003255.g I 0.000
Lus10035597.g Linum usitatissimum Lus10035597.g I 0.000
MDP0000203904 Malus domestica MDP0000203904 I 0.000
MDP0000374836 Malus domestica MDP0000374836 N 0.000
MTR_7g104190 Medicago truncatula MTR_7g104190 I 0.000
OB11G12850 Oryza brachyantha OB11G12850 N 0.000
OGLUM11G03180 Oryza glumaepatula OGLUM11G03180 N 0.000
OLONG_000717 Oryza longistaminata OLONG_000717 N 0.000
orange1.1g011345m.g Citrus sinensis orange1.1g011345m.g I 0.000
OS11G0154900 Oryza sativa OS11G0154900 N 0.000
Pavir.Ca00162 Panicum virgatum Pavir.Ca00162 N 0.000
Pavir.Cb02058 Panicum virgatum Pavir.Cb02058 N 0.000
POPTR_0006s11550 Populus trichocarpa POPTR_0006s11550 I 0.000
PRUPE_ppa003901mg Prunus persica PRUPE_ppa003901mg I 0.000
SapurV1A.0208s0130 Salix purpurea SapurV1A.0208s0130 I 0.000
Sb08g003500 Sorghum bicolor Sb08g003500 N 0.000
Si012481m.g Setaria italica Si012481m.g N 0.000
TCM_022516 Theobroma cacao TCM_022516 I 0.000
Thhalv10009681m.g Eutrema salsugineum Thhalv10009681m.g I 0.000
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I 0.000