GLYMA13G42160 (Glycine max)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 GLYMA13G42160 T320090_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.837 0.837
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G42160.2 RWP-RK 599 647
GLYMA13G42160.3 RWP-RK 556 604

Links

Other RWP-RK family TFs
Other Glycine max TFs

417 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29844.m003312 Ricinus communis 29844.m003312 N 0.000
30169.m006534 Ricinus communis 30169.m006534 N 0.000
AMTR_s00015p00239460 Amborella trichopoda AMTR_s00015p00239460 N 0.000
Aquca_135_00008 Aquilegia coerulea Aquca_135_00008 N 0.000
BGIOSGA006748 Oryza indica BGIOSGA006748 N 0.000
BGIOSGA023024 Oryza indica BGIOSGA023024 N 0.000
BGIOSGA026779 Oryza indica BGIOSGA026779 N 0.000
Bo1g150080 Brassica oleracea Bo1g150080 N 0.000
Bo2g046020 Brassica oleracea Bo2g046020 N 0.000
Bo3g022850 Brassica oleracea Bo3g022850 N 0.000
Bo5g144750 Brassica oleracea Bo5g144750 N 0.000
Bo9g110960 Brassica oleracea Bo9g110960 N 0.000
Bostr.2570s0048 Boechera stricta Bostr.2570s0048 N 0.000
Bostr.26833s0957 Boechera stricta Bostr.26833s0957 N 0.000
Bra003073 Brassica rapa Bra003073 N 0.000
Bra020775 Brassica rapa Bra020775 N 0.000
Bra022638 Brassica rapa Bra022638 N 0.000
Bra029088 Brassica rapa Bra029088 N 0.000
Bra040234 Brassica rapa Bra040234 N 0.000
BRADI1G38650 Brachypodium distachyon BRADI1G38650 N 0.000
BRADI3G09670 Brachypodium distachyon BRADI3G09670 N 0.000
Cagra.0084s0068 Capsella grandiflora Cagra.0084s0068 N 0.000
Carubv10026630m.g Capsella rubella Carubv10026630m.g N 0.000
cassava11522.m1 Manihot esculenta cassava11522.m1 N 0.000
cassava32469.m1 Manihot esculenta cassava32469.m1 N 0.000
cassava3377.m1 Manihot esculenta cassava3377.m1 N 0.000
cassava7222.valid.m1 Manihot esculenta cassava7222.valid.m1 N 0.000
Ca_03951 Cicer arietinum Ca_03951 N 0.000
Ca_13080 Cicer arietinum Ca_13080 N 0.000
chr6.CM0139.250.nd Lotus japonicus chr6.CM0139.250.nd N 0.000
Ciclev10005947m.g Citrus clementina Ciclev10005947m.g N 0.000
Ciclev10007150m.g Citrus clementina Ciclev10007150m.g N 0.000
Eucgr.A02667 Eucalyptus grandis Eucgr.A02667 N 0.000
gene06093-v1.0-hybrid Fragaria vesca gene06093-v1.0-hybrid N 0.000
GLYMA04G41710 Glycine max GLYMA04G41710 N 0.000
GLYMA06G13081 Glycine max GLYMA06G13081 N 0.000
GLYMA13G08740 Glycine max GLYMA13G08740 N 0.000
GLYMA13G27880 Glycine max GLYMA13G27880 N 0.000
GLYMA15G11130 Glycine max GLYMA15G11130 N 0.000
Gorai.008G270700 Gossypium raimondii Gorai.008G270700 N 0.000
GRMZM2G064638 Zea mays GRMZM2G064638 N 0.000
GRMZM2G085751 Zea mays GRMZM2G085751 N 0.000
GSMUA_Achr10G01060_001 Musa acuminata GSMUA_Achr10G01060_001 N 0.000
GSMUA_Achr8G19870_001 Musa acuminata GSMUA_Achr8G19870_001 N 0.000
LPERR02G09400 Leersia perrieri LPERR02G09400 N 0.000
LPERR06G13950 Leersia perrieri LPERR06G13950 N 0.000
LPERR08G15350 Leersia perrieri LPERR08G15350 N 0.000
MDP0000205030 Malus domestica MDP0000205030 N 0.000
MDP0000318772 Malus domestica MDP0000318772 N 0.000
mgf011108m Mimulus guttatus mgf011108m N 0.000
mgf014552m Mimulus guttatus mgf014552m N 0.000
MLOC_54435 Hordeum vulgare MLOC_54435 N 0.000
MTR_1g028470 Medicago truncatula MTR_1g028470 N 0.000
MTR_2g022280 Medicago truncatula MTR_2g022280 N 0.000
MTR_3g090850 Medicago truncatula MTR_3g090850 N 0.000
MUTE Vitis vinifera VIT_05s0020g02700 N 0.000
OB02G19900 Oryza brachyantha OB02G19900 N 0.000
OB08G25610 Oryza brachyantha OB08G25610 N 0.000
OBART02G11110 Oryza barthii OBART02G11110 N 0.000
OBART06G16920 Oryza barthii OBART06G16920 N 0.000
OBART08G18480 Oryza barthii OBART08G18480 N 0.000
OGLUM02G11060 Oryza glumaepatula OGLUM02G11060 N 0.000
OGLUM06G17990 Oryza glumaepatula OGLUM06G17990 N 0.000
OGLUM08G19420 Oryza glumaepatula OGLUM08G19420 N 0.000
OLONG_015104 Oryza longistaminata OLONG_015104 N 0.000
OMERI02G11850 Oryza meridionalis OMERI02G11850 N 0.000
OMERI06G17780 Oryza meridionalis OMERI06G17780 N 0.000
OMERI08G14480 Oryza meridionalis OMERI08G14480 N 0.000
ONIVA02G12460 Oryza nivara ONIVA02G12460 N 0.000
ONIVA06G19730 Oryza nivara ONIVA06G19730 N 0.000
ONIVA08G20580 Oryza nivara ONIVA08G20580 N 0.000
OPUNC02G09860 Oryza punctata OPUNC02G09860 N 0.000
OPUNC06G15310 Oryza punctata OPUNC06G15310 N 0.000
OPUNC08G16410 Oryza punctata OPUNC08G16410 N 0.000
orange1.1g042904m.g Citrus sinensis orange1.1g042904m.g N 0.000
ORGLA02G0100500 Oryza glaberrima ORGLA02G0100500 N 0.000
ORGLA06G0140300 Oryza glaberrima ORGLA06G0140300 N 0.000
ORGLA08G0160400 Oryza glaberrima ORGLA08G0160400 N 0.000
ORUFI02G11080 Oryza rufipogon ORUFI02G11080 N 0.000
ORUFI06G17910 Oryza rufipogon ORUFI06G17910 N 0.000
ORUFI08G20670 Oryza rufipogon ORUFI08G20670 N 0.000
OS02G0257500 Oryza sativa OS02G0257500 N 0.000
OS06G0526100 Oryza sativa OS06G0526100 N 0.000
OS08G0483900 Oryza sativa OS08G0483900 N 0.000
Pavir.Aa02723 Panicum virgatum Pavir.Aa02723 N 0.000
Pavir.Ab01030 Panicum virgatum Pavir.Ab01030 N 0.000
Pavir.Da00918 Panicum virgatum Pavir.Da00918 N 0.000
Pavir.Db01402 Panicum virgatum Pavir.Db01402 N 0.000
Pavir.Fb01787 Panicum virgatum Pavir.Fb01787 N 0.000
PDK_20s1314901g001 Phoenix dactylifera PDK_20s1314901g001 N 0.000
PK01904.1 Cannabis sativa PK01904.1 N 0.000
Pm008014 Prunus mume Pm008014 N 0.000
POPTR_0008s20720 Populus trichocarpa POPTR_0008s20720 N 0.000
POPTR_0012s01370 Populus trichocarpa POPTR_0012s01370 N 0.000
POPTR_0015s06160 Populus trichocarpa POPTR_0015s06160 N 0.000
PRUPE_ppa019299mg Prunus persica PRUPE_ppa019299mg N 0.000
SapurV1A.0022s0230 Salix purpurea SapurV1A.0022s0230 N 0.000
SapurV1A.1227s0030 Salix purpurea SapurV1A.1227s0030 N 0.000
Sb04g009390 Sorghum bicolor Sb04g009390 N 0.000
Sb10g020490 Sorghum bicolor Sb10g020490 N 0.000
Si006640m.g Setaria italica Si006640m.g N 0.000
Si017482m.g Setaria italica Si017482m.g N 0.000
Solyc01g080050.2 Solanum lycopersicum Solyc01g080050.2 N 0.000
Solyc03g007410.2 Solanum lycopersicum Solyc03g007410.2 N 0.000
SPCH Arabidopsis lyrata Al_scaffold_0008_1712 N 0.000
SPCH Arabidopsis thaliana AT5G53210 N 0.000
SPCH Vitis vinifera VIT_16s0050g02500 N 0.000
TCM_015345 Theobroma cacao TCM_015345 N 0.000
TCM_020520 Theobroma cacao TCM_020520 N 0.000
Thhalv10013877m.g Eutrema salsugineum Thhalv10013877m.g N 0.000
Traes_7DL_1717A9083 Triticum aestivum Traes_7DL_1717A9083 N 0.000