Traes_2DL_EE2EDAB78 (Triticum aestivum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Traes_2DL_EE2EDAB78 T320862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.816 0.816
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_2DL_EE2EDAB78.1 RWP-RK 565 613

Links

Other RWP-RK family TFs
Other Triticum aestivum TFs

411 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA035814 Oryza indica BGIOSGA035814 N
GRMZM2G157470 Zea mays GRMZM2G157470 N
LPERR12G16300 Leersia perrieri LPERR12G16300 N
OB12G26010 Oryza brachyantha OB12G26010 N
OBART12G19140 Oryza barthii OBART12G19140 N
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N
OMERI12G13490 Oryza meridionalis OMERI12G13490 N
ONIVA02G25900 Oryza nivara ONIVA02G25900 N
OPUNC12G17310 Oryza punctata OPUNC12G17310 N
ORGLA12G0164400 Oryza glaberrima ORGLA12G0164400 N
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N
OS12G0620400 Oryza sativa OS12G0620400 N
Pavir.Ia01134 Panicum virgatum Pavir.Ia01134 N
Pavir.Ib04134 Panicum virgatum Pavir.Ib04134 N
Si035862m.g Setaria italica Si035862m.g N