Bostr.18351s0175 (Boechera stricta)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Bostr.18351s0175 T321059_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.898 0.898
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.18351s0175.1.p RWP-RK 624 672

Links

Other RWP-RK family TFs
Other Boechera stricta TFs

413 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006598 Calypte anna Aan_R006598 I
Afo_R014608 Aptenodytes forsteri Afo_R014608 I
Alligator_sinensis_CCG000787.1 Alligator sinensis Alligator_sinensis_CCG000787.1 I
ARNTL Gorilla gorilla ENSGGOG00000013211 I
ARNTL Gallus gallus ENSGALG00000005378 I
ARNTL Loxodonta africana ENSLAFG00000026673 I
ARNTL Meleagris gallopavo ENSMGAG00000005349 I
ARNTL Tupaia belangeri ENSTBEG00000017387 I
ARNTL Myotis lucifugus ENSMLUG00000008503 I
ARNTL Macaca mulatta ENSMMUG00000009690 I
ARNTL Monodelphis domestica ENSMODG00000008708 I
ARNTL Sus scrofa ENSSSCG00000013397 I
Arntl Mus musculus ENSMUSG00000055116 D
Arntl Rattus norvegicus ENSRNOG00000014448 D
ARNTL Pteropus vampyrus ENSPVAG00000006712 I
ARNTL Pan troglodytes ENSPTRG00000003376 I
ARNTL Oryctolagus cuniculus ENSOCUG00000005940 I
ARNTL Otolemur garnettii ENSOGAG00000000736 I
ARNTL Anolis carolinensis ENSACAG00000004497 I
ARNTL Ochotona princeps ENSOPRG00000004853 I
arntl Xenopus tropicalis XB-GENE-495455 I
ARNTL Tursiops truncatus ENSTTRG00000013925 I
ARNTL Homo sapiens ENSG00000133794 D
ARNTL Felis catus ENSFCAG00000010983 I
ARNTL Vicugna pacos ENSVPAG00000005926 I
ARNTL Equus caballus ENSECAG00000012118 I
Arntl Dipodomys ordii ENSDORG00000015539 I
ARNTL Dasypus novemcinctus ENSDNOG00000003841 I
ARNTL Cavia porcellus ENSCPOG00000008795 I
ARNTL Callithrix jacchus ENSCJAG00000010162 I
ARNTL Choloepus hoffmanni ENSCHOG00000000376 I
ARNTL Canis familiaris ENSCAFG00000008095 I
ARNTL Bos taurus ENSBTAG00000013029 I
arntl.L Xenopus laevis XB-GENE-17342306 I
arntl.S Xenopus laevis XB-GENE-495459 I
arntl1a Tetraodon nigroviridis ENSTNIG00000005490 I
arntl1a Takifugu rubripes ENSTRUG00000008391 I
arntl1a Oryzias latipes ENSORLG00000019370 I
arntl1a Danio rerio ENSDARG00000006791 I
arntl1a Gasterosteus aculeatus ENSGACG00000002445 I
arntl1b Danio rerio ENSDARG00000035732 I
Brh_R010633 Buceros rhinoceros Brh_R010633 I
Cmyd_10009262 Chelonia mydas Cmyd_10009262 I
ENSAMEG00000002309 Ailuropoda melanoleuca ENSAMEG00000002309 I
ENSAMXG00000011758 Astyanax mexicanus ENSAMXG00000011758 I
ENSAPLG00000003885 Anas platyrhynchos ENSAPLG00000003885 I
ENSBTAP00000017323-D1 Bos grunniens ENSBTAP00000017323-D1 I
ENSCSAG00000004681 Chlorocebus sabaeus ENSCSAG00000004681 I
ENSFALG00000010646 Ficedula albicollis ENSFALG00000010646 I
ENSGMOG00000008906 Gadus morhua ENSGMOG00000008906 I
ENSLOCG00000003999 Lepisosteus oculatus ENSLOCG00000003999 I
ENSMICG00000001229 Microcebus murinus ENSMICG00000001229 I
ENSMPUG00000013135 Mustela putorius furo ENSMPUG00000013135 I
ENSNLEG00000017674 Nomascus leucogenys ENSNLEG00000017674 I
ENSOANG00000000503 Ornithorhynchus anatinus ENSOANG00000000503 I
ENSOARG00000007809 Ovis aries ENSOARG00000007809 I
ENSONIG00000010970 Oreochromis niloticus ENSONIG00000010970 I
ENSP00000384517 Macaca fascicularis ENSP00000384517 I
ENSPFOG00000008027 Poecilia formosa ENSPFOG00000008027 I
ENSPPYG00000003473 Pongo abelii ENSPPYG00000003473 I
ENSPSIG00000013131 Pelodiscus sinensis ENSPSIG00000013131 I
ENSSHAG00000017357 Sarcophilus harrisii ENSSHAG00000017357 I
ENSSTOG00000022144 Ictidomys tridecemlineatus ENSSTOG00000022144 I
ENSTGUG00000014839 Taeniopygia guttata ENSTGUG00000014839 I
ENSTGUG00000015954 Taeniopygia guttata ENSTGUG00000015954 I
ENSTSYG00000000577 Tarsius syrichta ENSTSYG00000000577 I
ENSXMAG00000015619 Xiphophorus maculatus ENSXMAG00000015619 I
fgenesh2_pg.scaffold_279000045 Branchiostoma floridae fgenesh2_pg.scaffold_279000045 I
fgenesh2_pg.scaffold_792000016 Branchiostoma floridae fgenesh2_pg.scaffold_792000016 I
Gfo_R013617 Geospiza fortis Gfo_R013617 I
Myotis_brandtii_Arntl_10004678 Myotis brandtii Myotis_brandtii_Arntl_10004678 I
NEMVEDRAFT_v1g132249 Nematostella vectensis NEMVEDRAFT_v1g132249 I
NEMVEDRAFT_v1g224692 Nematostella vectensis NEMVEDRAFT_v1g224692 I
Ocbimv22023737m.g Octopus bimaculoides Ocbimv22023737m.g I
Ogr18318 Ophisaurus gracilis Ogr18318 I
Pvit_10294 Pogona vitticeps Pvit_10294 I
Tal_R003521 Tyto alba Tal_R003521 I