CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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S1FA3
(
Arabidopsis thaliana
)
S1FA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04689 (S1FA)
IPR006779
AT3G09735
T321340_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
S1FA3
M07252_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
AT3G09735_col_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G09735.1
S1FA
8
73
KIESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGVQVPGE
Links
Other
S1FA
family TFs
Other
Arabidopsis thaliana
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
4123_Multiple
Saccharomyces mikatae
4123_Multiple
I
0.000
4515_Multiple
Saccharomyces bayanus
4515_Multiple
I
0.000
4533_YDR213W
Saccharomyces paradoxus
4533_YDR213W
I
0.000
AGOS_AGL091W
Ashbya gossypii
AGOS_AGL091W
I
0.000
Ecym_4144
Eremothecium cymbalariae
Ecym_4144
I
0.000
KLLA0_A04169g
Kluyveromyces lactis
KLLA0_A04169g
N
0.000
KNAG_0A02550
Kazachstania naganishii
KNAG_0A02550
I
0.000
Kwal_3122
Kluyveromyces waltii
Kwal_3122
I
0.000
LALA0_S12e02300g
Lachancea lanzarotensis
LALA0_S12e02300g
N
0.000
NCAS_0C02730
Naumovozyma castellii
NCAS_0C02730
I
0.000
NDAI_0E03460
Naumovozyma dairenensis
NDAI_0E03460
I
0.000
SAKL0H13024g
Lachancea kluyveri
SAKL0H13024g
I
0.000
Scas_Contig679.26
Saccharomyces castellii
Scas_Contig679.26
I
0.000
SU7_2615
Saccharomyces arboricola
SU7_2615
I
0.000
TDEL_0F05470
Torulaspora delbrueckii
TDEL_0F05470
N
0.000
UPC2
Saccharomyces cerevisiae
YDR213W
D
0.000