CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSTRUG00000014439 *(Takifugu rubripes)* SAND
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF01342 (SAND)	IPR000770	ENSTRUG00000014439	T321937_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
GMEB1 M02461_2.00	Meleagris gallopavo	NNACGYNNN	NNNRCGTNN	PBM Weirauch et al.(2014) pTH8318	0.978	0.867
ENSMODG00000010947 M02463_2.00	Monodelphis domestica	NNRCGYN	NRCGYNN	PBM Weirauch et al.(2014) pTH8671	0.978	0.853
Gmeb1 M00190_2.00	Mus musculus	NNRCGYNNN	NNNRCGYNN	PBM Badis et al.(2009) Gmeb1_1745	0.978	0.853
GMEB1 M02460_2.00	Homo sapiens	NNVCGYNNN	NNNRCGBNN	PBM Weirauch et al.(2014) pTH9026	0.978	0.840
GMEB1 M02465_2.00	Pteropus vampyrus	NBACGYHN	NDRCGTVN	PBM Weirauch et al.(2014) pTH9282	0.978	0.840
GMEB1 M05737_2.00	Homo sapiens	KKACGTAMNKTACGTAM	KTACGTAMNKTACGTMM	SELEX Yin et al.(2017) GMEB1_FL_HT-SELEX	0.978	0.840
GMEB1 M05738_2.00	Homo sapiens	KNRCGTVRBBVCGYHN	NDRCGBVVYBACGYNM	SELEX Yin et al.(2017) GMEB1_FL_Methyl-HT-SELEX	0.978	0.840
gmeb1.S M02469_2.00	Xenopus laevis	NKACGTVY	RBACGTMN	PBM Weirauch et al.(2014) pTH9298	0.975	0.853
gmeb1 M02468_2.00	Xenopus tropicalis	NNRCGYNNN	NNNRCGYNN	PBM Weirauch et al.(2014) pTH8745	0.975	0.840
Gmeb2 M00824_2.00	Mus musculus	NNACGYNN	NNRCGTNN	PBM Weirauch et al.(2013) pTH3084	0.961	0.707
GMEB2 M03471_2.00	Homo sapiens	YBACGYAM	KTRCGTVR	SELEX Jolma et al.(2013) GMEB2_1	0.961	0.707
GMEB2 M03472_2.00	Homo sapiens	WACGTGSTYACGYW	WRCGTRASCACGTW	SELEX Jolma et al.(2013) GMEB2_2	0.961	0.707
GMEB2 M03473_2.00	Homo sapiens	YACGTAACBBACGYA	TRCGTVVGTTACGTR	SELEX Jolma et al.(2013) GMEB2_3	0.961	0.707
GMEB2 M03474_2.00	Homo sapiens	BKACGTAM	KTACGTMV	SELEX Jolma et al.(2013) GMEB2_4	0.961	0.707
GMEB2 M05735_2.00	Homo sapiens	BYACGTAVSBTACGTRV	BYACGTAVSBTACGTRV	SELEX Yin et al.(2017) GMEB2_eDBD_HT-SELEX	0.961	0.707
GMEB2 M05736_2.00	Homo sapiens	BBACGYAMVBNACGYVV	BBRCGTNVBKTRCGTVV	SELEX Yin et al.(2017) GMEB2_eDBD_Methyl-HT-SELEX	0.961	0.707
GMEB2 M02462_2.00	Meleagris gallopavo	BBACGYH	DRCGTVV	PBM Weirauch et al.(2014) pTH9211	0.960	0.707
GMEB2 M02458_2.00	Anolis carolinensis	NNACGYANN	NNTRCGTNN	PBM Weirauch et al.(2014) pTH9219	0.959	0.707
ENSCING00000003435 M02459_2.00	Ciona intestinalis	NKACGTMVNN	NNBKACGTMN	PBM Weirauch et al.(2014) pTH9356	0.899	0.573
For this family, TFs with SR scores > 0.843* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSTRUP00000036926	SAND	2	77	EIEYGYPITCGDSRAVLLFKKFVCPGINVRCVKFNDQLISPKQFVHLAGKATLKDWKRAIRLGGVMLRKMMDSGQI

Links
Other SAND family TFs
Other *Takifugu rubripes* TFs

138 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
BGIOSGA020460	Oryza indica	BGIOSGA020460	N	0.000
BRADI2G14790	Brachypodium distachyon	BRADI2G14790	N	0.000
cassava7220.valid.m1	Manihot esculenta	cassava7220.valid.m1	N	0.000
Ca_03953	Cicer arietinum	Ca_03953	N	0.000
Cla004302	Citrullus lanatus	Cla004302	N	0.000
Cucsa.012950	Cucumis sativus	Cucsa.012950	N	0.000
F775_08366	Aegilops tauschii	F775_08366	N	0.000
GLYMA04G41691	Glycine max	GLYMA04G41691	N	0.000
GLYMA13G08390	Glycine max	GLYMA13G08390	N	0.000
GSMUA_Achr7G24590_001	Musa acuminata	GSMUA_Achr7G24590_001	N	0.000
LPERR05G23180	Leersia perrieri	LPERR05G23180	N	0.000
Lus10014934.g	Linum usitatissimum	Lus10014934.g	N	0.000
mgf001401m	Mimulus guttatus	mgf001401m	N	0.000
mgf006107m	Mimulus guttatus	mgf006107m	N	0.000
MLOC_61094	Hordeum vulgare	MLOC_61094	N	0.000
OB05G35020	Oryza brachyantha	OB05G35020	N	0.000
OBART05G27520	Oryza barthii	OBART05G27520	N	0.000
OGLUM05G29030	Oryza glumaepatula	OGLUM05G29030	N	0.000
OLONG_028119	Oryza longistaminata	OLONG_028119	N	0.000
OMERI05G23510	Oryza meridionalis	OMERI05G23510	N	0.000
ONIVA05G29570	Oryza nivara	ONIVA05G29570	N	0.000
OPUNC05G25110	Oryza punctata	OPUNC05G25110	N	0.000
ORGLA05G0239100	Oryza glaberrima	ORGLA05G0239100	N	0.000
ORUFI05G29480	Oryza rufipogon	ORUFI05G29480	N	0.000
Pavir.J13718	Panicum virgatum	Pavir.J13718	N	0.000
POPTR_0015s02320	Populus trichocarpa	POPTR_0015s02320	N	0.000
PRUPE_ppa004259mg	Prunus persica	PRUPE_ppa004259mg	N	0.000
Sb09g030110	Sorghum bicolor	Sb09g030110	N	0.000
Si021904m.g	Setaria italica	Si021904m.g	N	0.000
SIGE	Vitis vinifera	VIT_16s0050g02520	N	0.000
TCM_015349	Theobroma cacao	TCM_015349	N	0.000
Traes_1AL_0C41C44B1	Triticum aestivum	Traes_1AL_0C41C44B1	N	0.000
TRIUR3_33378	Triticum urartu	TRIUR3_33378	N	0.000

ENSTRUG00000014439 (Takifugu rubripes) SAND

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

138 Related TFs

ENSTRUG00000014439 **(Takifugu rubripes)
SAND**