fgenesh2_pg.scaffold_489000019 (Branchiostoma floridae)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 fgenesh2_pg.scaffold_489000019 T322200_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q4RVQ8_TETNG
M02466_2.00 		Tetraodon nigroviridis
NNNNDCGRNN
NNYCGHNNNN		 PBM
Weirauch et al.(2014)
pTH6271 		0.989 0.855
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_489000019 SAND 164 239

Links

Other SAND family TFs
Other Branchiostoma floridae TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG07781 Caenorhabditis briggsae CBG07781 I
CJA15946 Caenorhabditis japonica CJA15946 I
CRE19205 Caenorhabditis remanei CRE19205 I
mxl-3 Caenorhabditis elegans WBGene00003511 D
TCNE_0000925601 Toxocara canis TCNE_0000925601 I