estExt_fgenesh1_pg.C_60156 (Micromonas pusilla)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 estExt_fgenesh1_pg.C_60156 T324111_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_60156 Sigma 70 337 407

Links

Other Sigma 70 family TFs
Other Micromonas pusilla TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABW97889.1 Hemiselmis andersenii ABW97889.1 N 0.732
AFP65672.1 Chroomonas mesostigmatica AFP65672.1 N 0.732
CMK044C Cyanidioschyzon merolae CMK044C N 0.704
estExt_fgenesh1_pg.C_280046 Physcomitrella patens estExt_fgenesh1_pg.C_280046 N 0.704
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.746
e_gw1.06.00.250.1 Ostreococcus tauri e_gw1.06.00.250.1 N 0.944
e_gw1.6.1215.1 Ostreococcus RCC809 e_gw1.6.1215.1 N 0.944
fgenesh2_pg.C_Chr_04000345 Micromonas sp RCC299 fgenesh2_pg.C_Chr_04000345 N 1.000
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.704
OSTLU_41331 Ostreococcus lucimarinus OSTLU_41331 N 0.944
POPTR_0019s06100 Populus trichocarpa POPTR_0019s06100 N 0.704
SapurV1A.1189s0050 Salix purpurea SapurV1A.1189s0050 N 0.704
SapurV1A.1953s0020 Salix purpurea SapurV1A.1953s0020 N 0.704