estExt_fgenesh1_pg.C_60156 (Micromonas pusilla)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 estExt_fgenesh1_pg.C_60156 T324111_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_60156 Sigma 70 337 407

Links

Other Sigma 70 family TFs
Other Micromonas pusilla TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_pg.C_Chr_04000345 Micromonas sp RCC299 fgenesh2_pg.C_Chr_04000345 N 1.000
OSTLU_41331 Ostreococcus lucimarinus OSTLU_41331 N 0.944
e_gw1.6.1215.1 Ostreococcus RCC809 e_gw1.6.1215.1 N 0.944
e_gw1.06.00.250.1 Ostreococcus tauri e_gw1.06.00.250.1 N 0.944
estExt_Genewise1.C_340313 Physcomitrella patens estExt_Genewise1.C_340313 N 0.746
ABW97889.1 Hemiselmis andersenii ABW97889.1 N 0.732
AFP65672.1 Chroomonas mesostigmatica AFP65672.1 N 0.732
CMK044C Cyanidioschyzon merolae CMK044C N 0.704
POPTR_0019s06100 Populus trichocarpa POPTR_0019s06100 N 0.704
estExt_fgenesh1_pg.C_280046 Physcomitrella patens estExt_fgenesh1_pg.C_280046 N 0.704
Gorai.007G347300 Gossypium raimondii Gorai.007G347300 N 0.704
SapurV1A.1189s0050 Salix purpurea SapurV1A.1189s0050 N 0.704
SapurV1A.1953s0020 Salix purpurea SapurV1A.1953s0020 N 0.704