smad1.S (Xenopus laevis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 XB-GENE-6253892 T325437_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.990 0.990
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.990 0.990
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.941 0.941
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.941 0.941
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.941 0.941
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.941 0.941
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.941 0.941
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.912 0.912
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.912 0.912
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.912 0.912
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.912 0.912
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAB39330 SMAD 30 131
AAB39738 SMAD 30 131
AAH89146 SMAD 30 131

Links

Other SMAD family TFs
Other Xenopus laevis TFs

429 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA000736 Oryza indica BGIOSGA000736 N
BRADI2G51310 Brachypodium distachyon BRADI2G51310 N
GRMZM2G025758 Zea mays GRMZM2G025758 N
GSMUA_Achr9G10530_001 Musa acuminata GSMUA_Achr9G10530_001 I
LPERR01G28060 Leersia perrieri LPERR01G28060 N
OBART01G32570 Oryza barthii OBART01G32570 N
OGLUM01G36730 Oryza glumaepatula OGLUM01G36730 N
OLONG_001985 Oryza longistaminata OLONG_001985 I
OMERI01G29510 Oryza meridionalis OMERI01G29510 N
ONIVA01G36850 Oryza nivara ONIVA01G36850 N
OPUNC01G31580 Oryza punctata OPUNC01G31580 N
ORUFI01G35770 Oryza rufipogon ORUFI01G35770 N
OS01G0772100 Oryza sativa OS01G0772100 N
Pavir.J15413 Panicum virgatum Pavir.J15413 N
Pavir.J25219 Panicum virgatum Pavir.J25219 N
Sb03g035920 Sorghum bicolor Sb03g035920 N
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I
Si004290m.g Setaria italica Si004290m.g N
TRAES3BF074100010CFD_g Triticum aestivum TRAES3BF074100010CFD_g N