ENSAMXG00000025656 (Astyanax mexicanus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSAMXG00000025656 T327586_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SoxN
M03976_2.00 		Drosophila melanogaster
VYGHACARTNN
NNAYTGTDCRB		 SELEX
Nitta et al.(2015)
SoxN_1 		0.712 0.913
SoxN
M03977_2.00 		Drosophila melanogaster
NCAATNVCATTGN
NCAATGBNATTGN		 SELEX
Nitta et al.(2015)
SoxN_2 		0.712 0.913
SOX21
M03497_2.00 		Homo sapiens
AACAATKKYAKTGTT
AACAMTRMMATTGTT		 SELEX
Jolma et al.(2013)
SOX21_1 		0.703 0.913
SOX21
M03498_2.00 		Homo sapiens
AACAATRKDYAKTGTT
AACAMTRHMYATTGTT		 SELEX
Jolma et al.(2013)
SOX21_2 		0.703 0.913
SOX21
M03499_2.00 		Homo sapiens
TCAATGDYAKTGA
TCAMTRHCATTGA		 SELEX
Jolma et al.(2013)
SOX21_3 		0.703 0.913
SOX21
M03500_2.00 		Homo sapiens
TGAATGKYAKTCA
TGAMTRMCATTCA		 SELEX
Jolma et al.(2013)
SOX21_4 		0.703 0.913
Sox3
M00827_2.00 		Mus musculus
WDTVHNNN
NNNDBAHW		 PBM
Weirauch et al.(2013)
pTH3087 		0.692 0.899
Sox3
M03538_2.00 		Mus musculus
RAACAATRNYATTGTTK
MAACAATRNYATTGTTY		 SELEX
Jolma et al.(2013)
Sox3_1 		0.692 0.899
Sox3
M03539_2.00 		Mus musculus
BATCAATGBYATTGATD
HATCAATRVCATTGATV		 SELEX
Jolma et al.(2013)
Sox3_2 		0.692 0.899
Sox3
M03540_2.00 		Mus musculus
DATGAATKNYATTCATR
YATGAATRNMATTCATH		 SELEX
Jolma et al.(2013)
Sox3_3 		0.692 0.899
SOX3
M05769_2.00 		Homo sapiens
VYATTKTNVS
SBNAMAATRB		 SELEX
Yin et al.(2017)
SOX3_FL_HT-SELEX 		0.692 0.899
Sox3
M08168_2.00 		Mus musculus
CCTTTGTYYB
VRRACAAAGG		 ChIP-seq
Mathelier et al.(2014)
MA0514.1 		0.692 0.899
SOX3
M09391_2.00 		Homo sapiens
BYCWTTGTBYB
VRVACAAWGRV		 Misc
Kulakovskiy et al.(2013)
SOX3_HUMAN.H11MO.0.B 		0.692 0.899
Sox3
M09405_2.00 		Mus musculus
VRVACAAWGGV
BCCWTTGTBYB		 Misc
Kulakovskiy et al.(2013)
SOX3_MOUSE.H11MO.0.C 		0.692 0.899
Sox3
M09639_2.00 		Mus musculus
VACAAWRG
CYWTTGTB		 Misc
Heinz et al.(2010)
NPC-Sox3_GSE33059 		0.692 0.899
SOX3
M05770_2.00 		Homo sapiens
BYATTGTBNN
NNVACAATRV		 SELEX
Yin et al.(2017)
SOX3_FL_Methyl-HT-SELEX 		0.692 0.899
SOX15
M03508_2.00 		Homo sapiens
AACAATAMCATTGTT
AACAATGKTATTGTT		 SELEX
Jolma et al.(2013)
SOX15_1 		0.683 0.768
SOX15
M03509_2.00 		Homo sapiens
ATCAATAMCATTGAT
ATCAATGKTATTGAT		 SELEX
Jolma et al.(2013)
SOX15_2 		0.683 0.768
SOX15
M03510_2.00 		Homo sapiens
ATGAATAACATTCAT
ATGAATGTTATTCAT		 SELEX
Jolma et al.(2013)
SOX15_3 		0.683 0.768
SOX15
M05893_2.00 		Homo sapiens
YYWTTGTNHN
NDNACAAWRR		 SMiLE-seq
Isakova et al.(2017)
SOX15 		0.683 0.768
SOX15
M11308_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX15_Q3 		0.683 0.768
SOX2
M03519_2.00 		Homo sapiens
DAACAATGKYAKTGTTN
NAACAMTRMCATTGTTH		 SELEX
Jolma et al.(2013)
SOX2_1 		0.681 0.899
SOX2
M03520_2.00 		Homo sapiens
VTGAATGDYATTCAN
NTGAATRHCATTCAB		 SELEX
Jolma et al.(2013)
SOX2_2 		0.681 0.899
SOX2
M03521_2.00 		Homo sapiens
NATCAATGNYATTGAWD
HWTCAATRNCATTGATN		 SELEX
Jolma et al.(2013)
SOX2_3 		0.681 0.899
SOX2
M03522_2.00 		Homo sapiens
NAACAATANCATTGTTH
DAACAATGNTATTGTTN		 SELEX
Jolma et al.(2013)
SOX2_4 		0.681 0.899
SOX2
M03523_2.00 		Homo sapiens
HATCAATANCATTGATH
DATCAATGNTATTGATD		 SELEX
Jolma et al.(2013)
SOX2_5 		0.681 0.899
SOX2
M03524_2.00 		Homo sapiens
DTGAATWNCATTCAH
DTGAATGNWATTCAH		 SELEX
Jolma et al.(2013)
SOX2_6 		0.681 0.899
SOX2
M05897_2.00 		Homo sapiens
NACAAWRRNN
NNYYWTTGTN		 SMiLE-seq
Isakova et al.(2017)
SOX2 		0.681 0.899
Sox2
M08170_2.00 		Mus musculus
CCWTTGTB
VACAAWGG		 ChIP-seq
Mathelier et al.(2014)
MA0143.3 		0.681 0.899
Sox2
M08041_2.00 		Mus musculus
WHWRMADNACAAWRR
YYWTTGTNHTKYWDW		 ChIP-seq
Chen et al.(2011)
SRP000217_Sox2 		0.681 0.899
Sox2
M08042_2.00 		Mus musculus
TTWRCATNWSAAWRV
BYWTTSWNATGYWAA		 ChIP-seq
Chen et al.(2011)
SRP000712_Sox2 		0.681 0.899
SOX2
M09397_2.00 		Homo sapiens
BBYYWTTGTBYBB
VVRVACAAWRRVV		 Misc
Kulakovskiy et al.(2013)
SOX2_HUMAN.H11MO.0.A 		0.681 0.899
Sox2
M09409_2.00 		Mus musculus
THWRCATNACAAWRRV
BYYWTTGTNATGYWDA		 Misc
Kulakovskiy et al.(2013)
SOX2_MOUSE.H11MO.0.A 		0.681 0.899
SOX2
M11327_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q3_01 		0.681 0.899
SOX2
M11328_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q3 		0.681 0.899
SOX2
M11329_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q4 		0.681 0.899
SOX2
M11330_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX2_Q6 		0.681 0.899
Sox1
M00214_2.00 		Mus musculus
NNNNNWBAAW
WTTVWNNNNN		 PBM
Badis et al.(2009)
Sox1_2631 		0.681 0.870
Sox1
M03542_2.00 		Mus musculus
VACAATWNCATTGTT
AACAATGNWATTGTB		 SELEX
Jolma et al.(2013)
Sox1_1 		0.681 0.870
Sox1
M03543_2.00 		Mus musculus
NTGAATWNCATTCAN
NTGAATGNWATTCAN		 SELEX
Jolma et al.(2013)
Sox1_2 		0.681 0.870
Sox1
M03544_2.00 		Mus musculus
TCAATWNCATTGA
TCAATGNWATTGA		 SELEX
Jolma et al.(2013)
Sox1_3 		0.681 0.870
Sox1
M03545_2.00 		Mus musculus
TGAATDDNHATTCA
TGAATDNHHATTCA		 SELEX
Jolma et al.(2013)
Sox1_4 		0.681 0.870
Sox14
M00829_2.00 		Mus musculus
NAACAATD
HATTGTTN		 PBM
Weirauch et al.(2013)
pTH2677 		0.680 0.870
Sox14
M00206_2.00 		Mus musculus
NNNABAAW
WTTVTNNN		 PBM
Badis et al.(2009)
Sox14_2677 		0.680 0.870
SOX14
M03513_2.00 		Homo sapiens
ACAMTAMCATTG
CAATGKTAKTGT		 SELEX
Jolma et al.(2013)
SOX14_1 		0.680 0.870
SOX14
M03514_2.00 		Homo sapiens
NTGAATANCATTCAN
NTGAATGNTATTCAN		 SELEX
Jolma et al.(2013)
SOX14_2 		0.680 0.870
SOX14
M03515_2.00 		Homo sapiens
TCAATWVCATTGA
TCAATGBWATTGA		 SELEX
Jolma et al.(2013)
SOX14_3 		0.680 0.870
SOX14
M05783_2.00 		Homo sapiens
NYATTGWNNN
NNNWCAATRN		 SELEX
Yin et al.(2017)
SOX14_eDBD_HT-SELEX 		0.680 0.870
SOX14
M05785_2.00 		Homo sapiens
NCGAACAATK
MATTGTTCGN		 SELEX
Yin et al.(2017)
SOX14_FL_HT-SELEX 		0.680 0.870
SOX14
M05784_2.00 		Homo sapiens
NYATTGTNNN
NNNACAATRN		 SELEX
Yin et al.(2017)
SOX14_eDBD_Methyl-HT-SELEX 		0.680 0.870
SOX14
M05786_2.00 		Homo sapiens
NATTGTTYGB
VCRAACAATN		 SELEX
Yin et al.(2017)
SOX14_FL_Methyl-HT-SELEX 		0.680 0.870
Sox21a
M03978_2.00 		Drosophila melanogaster
NMACAMTAVCATTGTKN
NMACAATGBTAKTGTKN		 SELEX
Nitta et al.(2015)
Sox21a_1 		0.678 0.870
Sox21a
M03979_2.00 		Drosophila melanogaster
NNACAMTANCATTGTYH
DRACAATGNTAKTGTNN		 SELEX
Nitta et al.(2015)
Sox21a_2 		0.678 0.870
Sox21
M00208_2.00 		Mus musculus
WTTVWNNNN
NNNNWBAAW		 PBM
Badis et al.(2009)
Sox21_3417 		0.674 0.899
D
M03969_2.00 		Drosophila melanogaster
AMVGAACAAT
ATTGTTCBKT		 SELEX
Nitta et al.(2015)
D_1 		0.667 0.870
D
M03970_2.00 		Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN		 SELEX
Nitta et al.(2015)
D_2 		0.667 0.870
Sox21b
M03983_2.00 		Drosophila melanogaster
NAACAMTWNCAKTGTTB
VAACAMTGNWAKTGTTN		 SELEX
Nitta et al.(2015)
Sox21b_1 		0.667 0.870
D
M06559_2.00 		Drosophila melanogaster
BCYWTTGTTNT
ANAACAAWRGV		 B1H
Mathelier et al.(2014)
MA0445.1 		0.667 0.870
D
M06448_2.00 		Drosophila melanogaster
BCYATTGTYNW
WNRACAATRGV		 B1H
Zhu et al.(2011)
D_NAR_FBgn0000411 		0.667 0.870
D
M09694_2.00 		Drosophila melanogaster
RACAAWRGVH
DBCYWTTGTY		 Misc
Kulakovskiy et al.(2009)
D 		0.667 0.870
Sox15
M00202_2.00 		Mus musculus
WTTVWNNNN
NNNNWBAAW		 PBM
Badis et al.(2009)
Sox15_3457 		0.654 0.768
Sox8
M00197_2.00 		Mus musculus
NNNWBAAT
ATTVWNNN		 PBM
Badis et al.(2009)
Sox8_1733 		0.626 0.667
SOX8
M03483_2.00 		Homo sapiens
AACAATRTGCAGTGTT
AACACTGCAYATTGTT		 SELEX
Jolma et al.(2013)
SOX8_1 		0.626 0.667
SOX8
M03484_2.00 		Homo sapiens
ATGAATTKCAGTC
GACTGMAATTCAT		 SELEX
Jolma et al.(2013)
SOX8_2 		0.626 0.667
SOX8
M03485_2.00 		Homo sapiens
RAACAATTKCAGTGTTN
NAACACTGMAATTGTTY		 SELEX
Jolma et al.(2013)
SOX8_3 		0.626 0.667
SOX8
M03486_2.00 		Homo sapiens
HATCAATTKCAGTGATN
NATCACTGMAATTGATD		 SELEX
Jolma et al.(2013)
SOX8_4 		0.626 0.667
SOX8
M03487_2.00 		Homo sapiens
TGAATRTKCAGTCA
TGACTGMAYATTCA		 SELEX
Jolma et al.(2013)
SOX8_5 		0.626 0.667
SOX8
M03488_2.00 		Homo sapiens
AACAATTDCAGTGTT
AACACTGHAATTGTT		 SELEX
Jolma et al.(2013)
SOX8_6 		0.626 0.667
SOX8
M03489_2.00 		Homo sapiens
ATGAATTKCAGTC
GACTGMAATTCAT		 SELEX
Jolma et al.(2013)
SOX8_7 		0.626 0.667
SOX8
M03490_2.00 		Homo sapiens
MATCAATTGCAGTGATK
MATCACTGCAATTGATK		 SELEX
Jolma et al.(2013)
SOX8_8 		0.626 0.667
SOX8
M05749_2.00 		Homo sapiens
NDAACAATRV
BYATTGTTHN		 SELEX
Yin et al.(2017)
SOX8_eDBD_HT-SELEX 		0.626 0.667
SOX8
M05751_2.00 		Homo sapiens
ACAATRVNNBYATTGT
ACAATRVNNBYATTGT		 SELEX
Yin et al.(2017)
SOX8_FL_HT-SELEX 		0.626 0.667
SOX8
M05750_2.00 		Homo sapiens
BYATTGTTNN
NNAACAATRV		 SELEX
Yin et al.(2017)
SOX8_eDBD_Methyl-HT-SELEX 		0.626 0.667
SOX8
M05752_2.00 		Homo sapiens
ACAATRVNNBYATTGT
ACAATRVNNBYATTGT		 SELEX
Yin et al.(2017)
SOX8_FL_Methyl-HT-SELEX 		0.626 0.667
Sox10
M00826_2.00 		Mus musculus
NNNNWBAAT
ATTVWNNNN		 PBM
Weirauch et al.(2013)
pTH1729 		0.619 0.652
SOX10
M03491_2.00 		Homo sapiens
AACAATTKCAGTGTT
AACACTGMAATTGTT		 SELEX
Jolma et al.(2013)
SOX10_1 		0.619 0.652
SOX10
M03492_2.00 		Homo sapiens
AACAATRTKCAGTGTT
AACACTGMAYATTGTT		 SELEX
Jolma et al.(2013)
SOX10_2 		0.619 0.652
SOX10
M03493_2.00 		Homo sapiens
ATCAATTKCAGTGAT
ATCACTGMAATTGAT		 SELEX
Jolma et al.(2013)
SOX10_3 		0.619 0.652
SOX10
M03494_2.00 		Homo sapiens
ATGAATTKCAGTCAT
ATGACTGMAATTCAT		 SELEX
Jolma et al.(2013)
SOX10_4 		0.619 0.652
SOX10
M03495_2.00 		Homo sapiens
TGAATGTKCAGTCA
TGACTGMACATTCA		 SELEX
Jolma et al.(2013)
SOX10_5 		0.619 0.652
SOX9
M03501_2.00 		Homo sapiens
DDACAATRV
BYATTGTHH		 SELEX
Jolma et al.(2013)
SOX9_1 		0.619 0.652
SOX9
M03502_2.00 		Homo sapiens
AACAATRTGCAGTGTT
AACACTGCAYATTGTT		 SELEX
Jolma et al.(2013)
SOX9_2 		0.619 0.652
SOX9
M03503_2.00 		Homo sapiens
ATCAATRTKCAGTGAT
ATCACTGMAYATTGAT		 SELEX
Jolma et al.(2013)
SOX9_3 		0.619 0.652
SOX9
M03504_2.00 		Homo sapiens
ATGAATRTKCAGTCAT
ATGACTGMAYATTCAT		 SELEX
Jolma et al.(2013)
SOX9_4 		0.619 0.652
SOX9
M03505_2.00 		Homo sapiens
RAACAATTKCAGTGTTH
DAACACTGMAATTGTTY		 SELEX
Jolma et al.(2013)
SOX9_5 		0.619 0.652
SOX9
M03506_2.00 		Homo sapiens
NATCAATKKYAGTGATN
NATCACTRMMATTGATN		 SELEX
Jolma et al.(2013)
SOX9_6 		0.619 0.652
SOX9
M03507_2.00 		Homo sapiens
NATGAATTKCAGTCATN
NATGACTGMAATTCATN		 SELEX
Jolma et al.(2013)
SOX9_7 		0.619 0.652
Sox10
M03535_2.00 		Mus musculus
AACAATTKCAGTGTT
AACACTGMAATTGTT		 SELEX
Jolma et al.(2013)
Sox10_1 		0.619 0.652
Sox10
M03536_2.00 		Mus musculus
ATCAATTKCAGTGAT
ATCACTGMAATTGAT		 SELEX
Jolma et al.(2013)
Sox10_2 		0.619 0.652
Sox10
M03537_2.00 		Mus musculus
ATGAATTDCAGTCAT
ATGACTGHAATTCAT		 SELEX
Jolma et al.(2013)
Sox10_3 		0.619 0.652
SOX10
M05759_2.00 		Homo sapiens
AACAATRNNNYATTGTT
AACAATRNNNYATTGTT		 SELEX
Yin et al.(2017)
SOX10_eDBD_HT-SELEX 		0.619 0.652
SOX10
M05761_2.00 		Homo sapiens
NACAATRVNNBYATTGTN
NACAATRVNNBYATTGTN		 SELEX
Yin et al.(2017)
SOX10_FL_HT-SELEX 		0.619 0.652
SOX9
M05767_2.00 		Homo sapiens
HDAACAATRV
BYATTGTTHD		 SELEX
Yin et al.(2017)
SOX9_eDBD_HT-SELEX 		0.619 0.652
SOX10
M05891_2.00 		Homo sapiens
BBCWWTGTTH
DAACAWWGVV		 SMiLE-seq
Isakova et al.(2017)
SOX10 		0.619 0.652
SOX9
M02716_2.00 		Homo sapiens
DAACAATRG
CYATTGTTH		 SELEX
Mathelier et al.(2014)
MA0077.1 		0.619 0.652
SOX10
M08165_2.00 		Homo sapiens
NNVACAAAGVN
NBCTTTGTBNN		 ChIP-seq
Mathelier et al.(2014)
MA0442.2 		0.619 0.652
SOX10
M09387_2.00 		Homo sapiens
VAADRVVNBCWTTGTN
NACAAWGVNBBYHTTB		 Misc
Kulakovskiy et al.(2013)
SOX10_HUMAN.H11MO.0.B 		0.619 0.652
SOX9
M09389_2.00 		Homo sapiens
RMACAAWGVNNBYHTT
AADRVNNBCWTTGTKY		 Misc
Kulakovskiy et al.(2013)
SOX9_HUMAN.H11MO.0.B 		0.619 0.652
Sox10
M09403_2.00 		Mus musculus
VAADRVVNBCWTTGTN
NACAAWGVNBBYHTTB		 Misc
Kulakovskiy et al.(2013)
SOX10_MOUSE.H11MO.0.B 		0.619 0.652
Sox9
M09399_2.00 		Mus musculus
RMACAAWGVNNBYHTT
AADRVNNBCWTTGTKY		 Misc
Kulakovskiy et al.(2013)
SOX9_MOUSE.H11MO.0.A 		0.619 0.652
SOX10
M11296_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX10_Q3 		0.619 0.652
SOX10
M11297_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX10_Q6_01 		0.619 0.652
SOX10
M11298_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX10_Q6 		0.619 0.652
SOX9
M11304_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX9_09 		0.619 0.652
SOX9
M11305_2.00 		Homo sapiens
NNNDAACAATRRNN
NNYYATTGTTHNNN		 Transfac
Matys et al.(2006)
V$SOX9_B1 		0.619 0.652
SOX9
M11306_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX9_Q4 		0.619 0.652
SOX9
M11307_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX9_Q5 		0.619 0.652
SOX10
M05760_2.00 		Homo sapiens
AACAATRSNSYATTGTT
AACAATRSNSYATTGTT		 SELEX
Yin et al.(2017)
SOX10_eDBD_Methyl-HT-SELEX 		0.619 0.652
SOX10
M05762_2.00 		Homo sapiens
NACAATRVNNBYATTGTN
NACAATRVNNBYATTGTN		 SELEX
Yin et al.(2017)
SOX10_FL_Methyl-HT-SELEX 		0.619 0.652
SOX9
M05768_2.00 		Homo sapiens
NNNACAATRS
SYATTGTNNN		 SELEX
Yin et al.(2017)
SOX9_eDBD_Methyl-HT-SELEX 		0.619 0.652
SRY
M03525_2.00 		Homo sapiens
AACAATANCATTGTT
AACAATGNTATTGTT		 SELEX
Jolma et al.(2013)
SRY_1 		0.613 0.652
SRY
M03526_2.00 		Homo sapiens
AACAATHHNCATTGTT
AACAATGNDDATTGTT		 SELEX
Jolma et al.(2013)
SRY_2 		0.613 0.652
SRY
M03527_2.00 		Homo sapiens
TCAATAMCATTGA
TCAATGKTATTGA		 SELEX
Jolma et al.(2013)
SRY_3 		0.613 0.652
SRY
M03528_2.00 		Homo sapiens
TGAATANCATTCA
TGAATGNTATTCA		 SELEX
Jolma et al.(2013)
SRY_4 		0.613 0.652
SRY
M05898_2.00 		Homo sapiens
NACAATNV
BNATTGTN		 SMiLE-seq
Isakova et al.(2017)
SRY 		0.613 0.652
SRY
M02717_2.00 		Homo sapiens
NDWAACAAW
WTTGTWWHN		 SELEX
Mathelier et al.(2014)
MA0084.1 		0.613 0.652
SRY
M09398_2.00 		Homo sapiens
BWTTGTTWH
DWAACAAWV		 Misc
Kulakovskiy et al.(2013)
SRY_HUMAN.H11MO.0.B 		0.613 0.652
SRY
M11331_2.00 		Homo sapiens
AAWSWMM
KKWSWTT		 Transfac
Matys et al.(2006)
V$SRY_01 		0.613 0.652
SRY
M11332_2.00 		Homo sapiens
HBHWTTGTTWDN
NHWAACAAWDVD		 Transfac
Matys et al.(2006)
V$SRY_02 		0.613 0.652
SRY
M11333_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRY_Q6 		0.613 0.652
Sox17
M00199_2.00 		Mus musculus
NNNNWSAAT
ATTSWNNNN		 PBM
Badis et al.(2009)
Sox17_2837 		0.611 0.565
Sox17
M03533_2.00 		Mus musculus
AACAATWDCATTGTT
AACAATGHWATTGTT		 SELEX
Jolma et al.(2013)
Sox17_1 		0.611 0.565
Sox17
M03534_2.00 		Mus musculus
ATGAATWNCATTCAT
ATGAATGNWATTCAT		 SELEX
Jolma et al.(2013)
Sox17_2 		0.611 0.565
SOX17
M05896_2.00 		Homo sapiens
DRACAATRVN
NBYATTGTYH		 SMiLE-seq
Isakova et al.(2017)
SOX17 		0.611 0.565
Sox17
M02718_2.00 		Mus musculus
SACAATRNN
NNYATTGTS		 SELEX
Mathelier et al.(2014)
MA0078.1 		0.611 0.565
Sox17
M08040_2.00 		Mus musculus
RVACAAWRRVN
NBYYWTTGTBY		 ChIP-seq
Chen et al.(2011)
GSE19026_Sox17_XENcells 		0.611 0.565
SOX17
M09396_2.00 		Homo sapiens
BCCATTKTNBN
NVNAMAATGGV		 Misc
Kulakovskiy et al.(2013)
SOX17_HUMAN.H11MO.0.C 		0.611 0.565
SOX17
M11323_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX17_01 		0.611 0.565
SOX17
M11324_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX17_Q2 		0.611 0.565
Sox18
M00204_2.00 		Mus musculus
NNNWBAAT
ATTVWNNN		 PBM
Badis et al.(2009)
Sox18_3506 		0.611 0.536
SOX18
M03529_2.00 		Homo sapiens
AACAATDNCATTGTT
AACAATGNHATTGTT		 SELEX
Jolma et al.(2013)
SOX18_1 		0.611 0.536
SOX18
M03530_2.00 		Homo sapiens
ATCAATWDCATTGAT
ATCAATGHWATTGAT		 SELEX
Jolma et al.(2013)
SOX18_2 		0.611 0.536
SOX18
M03531_2.00 		Homo sapiens
ATGAATWYCATTCAT
ATGAATGRWATTCAT		 SELEX
Jolma et al.(2013)
SOX18_3 		0.611 0.536
SOX18
M05791_2.00 		Homo sapiens
VACRAYGV
BCRTYGTB		 SELEX
Yin et al.(2017)
SOX18_eDBD_HT-SELEX 		0.611 0.536
SOX18
M11334_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX18_Q5_01 		0.611 0.536
SOX18
M11335_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX18_Q5 		0.611 0.536
SOX18
M05792_2.00 		Homo sapiens
BYATTGTN
NACAATRV		 SELEX
Yin et al.(2017)
SOX18_eDBD_Methyl-HT-SELEX 		0.611 0.536
Sox7
M00209_2.00 		Mus musculus
NNNWBAAT
ATTVWNNN		 PBM
Badis et al.(2009)
Sox7_3460 		0.601 0.551
SOX7
M03516_2.00 		Homo sapiens
AACAATRDNHAKTGTT
AACAMTDNHYATTGTT		 SELEX
Jolma et al.(2013)
SOX7_1 		0.601 0.551
SOX7
M03517_2.00 		Homo sapiens
DAACAATKDYAKTGTTN
NAACAMTRHMATTGTTH		 SELEX
Jolma et al.(2013)
SOX7_2 		0.601 0.551
SOX7
M03518_2.00 		Homo sapiens
NATGAATKDCAKTCATN
NATGAMTGHMATTCATN		 SELEX
Jolma et al.(2013)
SOX7_3 		0.601 0.551
SOX7
M05787_2.00 		Homo sapiens
ACAATDNHATTGT
ACAATDNHATTGT		 SELEX
Yin et al.(2017)
SOX7_eDBD_HT-SELEX 		0.601 0.551
SOX7
M11325_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX7_Q2 		0.601 0.551
SOX7
M05788_2.00 		Homo sapiens
ACAATDNHATTGT
ACAATDNHATTGT		 SELEX
Yin et al.(2017)
SOX7_eDBD_Methyl-HT-SELEX 		0.601 0.551
Sry
M00211_2.00 		Mus musculus
ATTRTNNNNN
NNNNNAYAAT		 PBM
Badis et al.(2009)
Sry_2833 		0.586 0.609
Sry
M09408_2.00 		Mus musculus
BWTTGTTWH
DWAACAAWV		 Misc
Kulakovskiy et al.(2013)
SRY_MOUSE.H11MO.0.B 		0.586 0.609
Sox6
M00828_2.00 		Mus musculus
WTTGTNNNN
NNNNACAAW		 PBM
Weirauch et al.(2013)
pTH3862 		0.585 0.522
SOX6
M05892_2.00 		Homo sapiens
DRACAATRVN
NBYATTGTYH		 SMiLE-seq
Isakova et al.(2017)
SOX6 		0.585 0.522
Sox6
M08169_2.00 		Mus musculus
BCWTTGTYYY
RRRACAAWGV		 ChIP-seq
Mathelier et al.(2014)
MA0515.1 		0.585 0.522
Sox6
M09640_2.00 		Mus musculus
BHWTTGTBNN
NNVACAAWDV		 Misc
Heinz et al.(2010)
Myotubes-Sox6_GSE32627 		0.585 0.522
SOX6
M11300_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX6_Q5 		0.585 0.522
Sox5
M00203_2.00 		Mus musculus
ATTGTBNN
NNVACAAT		 PBM
Badis et al.(2009)
Sox5_3459 		0.578 0.522
Sox13
M00212_2.00 		Mus musculus
RAACAATW
WATTGTTY		 PBM
Badis et al.(2009)
Sox13_1718 		0.578 0.522
SOX5
M05894_2.00 		Homo sapiens
DVACAATRVN
NBYATTGTBH		 SMiLE-seq
Isakova et al.(2017)
SOX5 		0.578 0.522
Sox5
M02719_2.00 		Mus musculus
NAACAAT
ATTGTTN		 SELEX
Mathelier et al.(2014)
MA0087.1 		0.578 0.522
SOX13
M08166_2.00 		Homo sapiens
NNACAATGVNN
NNBCATTGTNN		 ChIP-seq
Mathelier et al.(2014)
MA1120.1 		0.578 0.522
SOX5
M09390_2.00 		Homo sapiens
NAACAATN
NATTGTTN		 Misc
Kulakovskiy et al.(2013)
SOX5_HUMAN.H11MO.0.C 		0.578 0.522
Sox5
M09404_2.00 		Mus musculus
NAACAATN
NATTGTTN		 Misc
Kulakovskiy et al.(2013)
SOX5_MOUSE.H11MO.0.C 		0.578 0.522
SOX5
M11309_2.00 		Homo sapiens
NNAACAATNN
NNATTGTTNN		 Transfac
Matys et al.(2006)
V$SOX5_01 		0.578 0.522
SOX5
M11310_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX5_Q5 		0.578 0.522
Sox14
M03971_2.00 		Drosophila melanogaster
BTGTWCGGTR
YACCGWACAV		 SELEX
Nitta et al.(2015)
Sox14_1 		0.574 0.580
Sox14
M03972_2.00 		Drosophila melanogaster
VACAATDNCATTGTB
VACAATGNHATTGTB		 SELEX
Nitta et al.(2015)
Sox14_2 		0.574 0.580
Sox14
M06449_2.00 		Drosophila melanogaster
VYYCTTTGTYC
GRACAAAGRRB		 B1H
Zhu et al.(2011)
Sox14_SANGER_10_FBgn0005612 		0.574 0.580
Sox15
M03973_2.00 		Drosophila melanogaster
WYTGTTCGGTD
HACCGAACARW		 SELEX
Nitta et al.(2015)
Sox15_1 		0.573 0.522
Sox15
M03974_2.00 		Drosophila melanogaster
VACAATDNCATTGTN
NACAATGNHATTGTB		 SELEX
Nitta et al.(2015)
Sox15_2 		0.573 0.522
Sox15
M06450_2.00 		Drosophila melanogaster
RWACAATR
YATTGTWY		 B1H
Zhu et al.(2011)
Sox15_SANGER_5_FBgn0005613 		0.573 0.522
SOX4
M01026_2.00 		Homo sapiens
AACAAWGR
YCWTTGTT		 PBM
Scharer et al.(2009)
Sox4 		0.568 0.667
Sox11
M00210_2.00 		Mus musculus
WTTGTBNNN
NNNVACAAW		 PBM
Badis et al.(2009)
Sox11_2266 		0.568 0.667
Sox4
M00213_2.00 		Mus musculus
NNVACAAWD
HWTTGTBNN		 PBM
Badis et al.(2009)
Sox4_2941 		0.568 0.667
SOX4
M03496_2.00 		Homo sapiens
NAACAATTKCAGTGTT
AACACTGMAATTGTTN		 SELEX
Jolma et al.(2013)
SOX4_1 		0.568 0.667
Sox11
M03541_2.00 		Mus musculus
AACAATTKCAGTGTT
AACACTGMAATTGTT		 SELEX
Jolma et al.(2013)
Sox11_1 		0.568 0.667
SOX4
M05765_2.00 		Homo sapiens
NRACAAWGVV
BBCWTTGTYN		 SELEX
Yin et al.(2017)
SOX4_eDBD_HT-SELEX 		0.568 0.667
SOX4
M09388_2.00 		Homo sapiens
BYCTTTGTYYBB
VVRRACAAAGRV		 Misc
Kulakovskiy et al.(2013)
SOX4_HUMAN.H11MO.0.B 		0.568 0.667
Sox4
M09410_2.00 		Mus musculus
BYCTTTGTYYBB
VVRRACAAAGRV		 Misc
Kulakovskiy et al.(2013)
SOX4_MOUSE.H11MO.0.A 		0.568 0.667
Sox4
M09641_2.00 		Mus musculus
BCWTTGTYCN
NGRACAAWGV		 Misc
Heinz et al.(2010)
proB-Sox4_GSE50066 		0.568 0.667
SOX11
M11326_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX11_Q6 		0.568 0.667
SOX4
M11301_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q3 		0.568 0.667
SOX4
M11302_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q5_02 		0.568 0.667
SOX4
M11303_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX4_Q5 		0.568 0.667
SOX4
M05766_2.00 		Homo sapiens
NRACAAWGVV
BBCWTTGTYN		 SELEX
Yin et al.(2017)
SOX4_eDBD_Methyl-HT-SELEX 		0.568 0.667
sem-2
M02488_2.00 		Caenorhabditis elegans
NNNHVNNNNN
NNNNNBDNNN		 PBM
Weirauch et al.(2014)
pTH9043 		0.568 0.623
Sox12
M00205_2.00 		Mus musculus
HWTTGTBNNN
NNNVACAAWD		 PBM
Badis et al.(2009)
Sox12_3957 		0.565 0.652
SOX12
M05789_2.00 		Homo sapiens
NATTGTTCGGK
MCCGAACAATN		 SELEX
Yin et al.(2017)
SOX12_eDBD_HT-SELEX 		0.565 0.652
SOX12
M05790_2.00 		Homo sapiens
YATTGTTCBKT
AMVGAACAATR		 SELEX
Yin et al.(2017)
SOX12_eDBD_Methyl-HT-SELEX 		0.565 0.652
egl-13
M00710_2.00 		Caenorhabditis elegans
NNAACAATWN
NWATTGTTNN		 PBM
Narasimhan et al.(2015)
pTH9125 		0.561 0.580
Sox102F
M03981_2.00 		Drosophila melanogaster
ATTGTTCGGTGKN
NMCACCGAACAAT		 SELEX
Nitta et al.(2015)
Sox102F_1 		0.561 0.536
Sox102F
M03982_2.00 		Drosophila melanogaster
NAACAATDDCATTGTTN
NAACAATGHHATTGTTN		 SELEX
Nitta et al.(2015)
Sox102F_2 		0.561 0.536
Sox30
M00201_2.00 		Mus musculus
ATTRTBNNNN
NNNNVAYAAT		 PBM
Badis et al.(2009)
Sox30_2781 		0.528 0.493
SOX30
M05753_2.00 		Homo sapiens
NRACAATN
NATTGTYN		 SELEX
Yin et al.(2017)
SOX30_eDBD_HT-SELEX 		0.528 0.493
SOX30
M05754_2.00 		Homo sapiens
BATTGTYN
NRACAATV		 SELEX
Yin et al.(2017)
SOX30_eDBD_Methyl-HT-SELEX 		0.528 0.493
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.484 0.319
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.484 0.319
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.484 0.319
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.484 0.319
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.484 0.319
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.432 0.290
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.432 0.290
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000026361 Sox 8 76

Links

Other Sox family TFs
Other Astyanax mexicanus TFs

2170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_020880 Acremonium chrysogenum ACRE_020880 N 0.000
BATDEDRAFT_7482 Batrachochytrium dendrobatidis BATDEDRAFT_7482 I 0.000
CERSUDRAFT_123639 Ceriporiopsis subvermispora CERSUDRAFT_123639 N 0.000
CHGG_06584 Chaetomium globosum CHGG_06584 N 0.000
CTHT_0011880 Chaetomium thermophilum CTHT_0011880 N 0.000
CY34DRAFT_56447 Suillus luteus CY34DRAFT_56447 N 0.000
DICSQDRAFT_67430 Dichomitus squalens DICSQDRAFT_67430 I 0.000
E5Q_02264 Mixia osmundae E5Q_02264 N 0.000
FGRRES_08890 Fusarium graminearum FGRRES_08890 N 0.000
FIBRA_04764 Fibroporia radiculosa FIBRA_04764 I 0.000
FOMPIDRAFT_1081834 Fomitopsis pinicola FOMPIDRAFT_1081834 I 0.000
FOMPIDRAFT_140591 Fomitopsis pinicola FOMPIDRAFT_140591 I 0.000
FOXG_17746 Fusarium oxysporum FOXG_17746 N 0.000
FPSE_08224 Fusarium pseudograminearum FPSE_08224 N 0.000
FVEG_02489 Fusarium verticillioides FVEG_02489 N 0.000
GALMADRAFT_33159 Galerina marginata GALMADRAFT_33159 I 0.000
Genemark.3077_g Heterobasidion annosum Genemark.3077_g N 0.000
GLOINDRAFT_12270 Rhizophagus irregularis GLOINDRAFT_12270 I 0.000
GLOINDRAFT_349274 Rhizophagus irregularis GLOINDRAFT_349274 N 0.000
GLOINDRAFT_45684 Rhizophagus irregularis GLOINDRAFT_45684 I 0.000
GLOINDRAFT_49399 Rhizophagus irregularis GLOINDRAFT_49399 I 0.000
GLOINDRAFT_51431 Rhizophagus irregularis GLOINDRAFT_51431 I 0.437
HETIRDRAFT_476671 Heterobasidion irregulare HETIRDRAFT_476671 N 0.000
J056_002766 Wallemia ichthyophaga J056_002766 N 0.000
M404DRAFT_69579 Pisolithus tinctorius M404DRAFT_69579 I 0.000
M422DRAFT_121750 Sphaerobolus stellatus M422DRAFT_121750 N 0.000
M422DRAFT_126587 Sphaerobolus stellatus M422DRAFT_126587 N 0.000
MAC_04576 Metarhizium acridum MAC_04576 I 0.000
MAJ_03732 Metarhizium majus MAJ_03732 N 0.000
MAJ_04611 Metarhizium majus MAJ_04611 I 0.000
MAM_03716 Metarhizium album MAM_03716 I 0.000
MANI_013732 Metarhizium anisopliae MANI_013732 I 0.000
MANI_028883 Metarhizium anisopliae MANI_028883 I 0.000
MBR_05977 Metarhizium brunneum MBR_05977 I 0.000
MELLADRAFT_94219 Melampsora laricipopulina MELLADRAFT_94219 N 0.000
MGG_02979 Magnaporthe oryzae MGG_02979 N 0.000
MGU_06500 Metarhizium guizhouense MGU_06500 I 0.000
Moror_9029 Moniliophthora roreri Moror_9029 N 0.000
MVLG_04343 Microbotryum violaceum MVLG_04343 N 0.000
MYCTH_2115740 Myceliophthora thermophila MYCTH_2115740 N 0.000
NCU03481 Neurospora crassa NCU03481 I 0.443
NEUTE1DRAFT_123419 Neurospora tetrasperma NEUTE1DRAFT_123419 I 0.443
OCS_06644 Ophiocordyceps sinensis OCS_06644 N 0.000
PaG_05617 Pseudozyma aphidis PaG_05617 N 0.000
PAN0_018c5621 Pseudozyma antarctica PAN0_018c5621 N 0.000
PAXRUDRAFT_47613 Paxillus rubicundulus PAXRUDRAFT_47613 I 0.000
PAXRUDRAFT_55546 Paxillus rubicundulus PAXRUDRAFT_55546 N 0.000
PAXRUDRAFT_95391 Paxillus rubicundulus PAXRUDRAFT_95391 I 0.000
PGTG_16202 Puccinia graminis PGTG_16202 I 0.000
PHSY_001785 Pseudozyma hubeiensis PHSY_001785 N 0.000
PILCRDRAFT_57544 Piloderma croceum PILCRDRAFT_57544 N 0.000
PISMIDRAFT_39129 Pisolithus microcarpus PISMIDRAFT_39129 I 0.000
PLICRDRAFT_82773 Plicaturopsis crispa PLICRDRAFT_82773 N 0.000
PNEG_02134 Pneumocystis murina PNEG_02134 I 0.000
POSPLDRAFT_104707 Postia placenta POSPLDRAFT_104707 I 0.000
POSPLDRAFT_43059 Postia placenta POSPLDRAFT_43059 I 0.000
PredSwiss_ASS2010_4380.1 Pneumocystis carinii PredSwiss_ASS2010_4380.1 I 0.000
PredSwiss_CON587.2 Pneumocystis carinii PredSwiss_CON587.2 I 0.000
PredSwiss_EST856.1 Pneumocystis carinii PredSwiss_EST856.1 I 0.000
PSEUBRA_SCAF20g03099 Pseudozyma brasiliensis PSEUBRA_SCAF20g03099 N 0.000
PTRG_07337 Pyrenophora triticirepentis PTRG_07337 N 0.000
S40285_04294 Stachybotrys chlorohalonata S40285_04294 N 0.000
SBOR_9074 Sclerotinia borealis SBOR_9074 I 0.000
SERLA73DRAFT_18452 Serpula lacrymans SERLA73DRAFT_18452 I 0.000
SERLA73DRAFT_71121 Serpula lacrymans SERLA73DRAFT_71121 I 0.000
SMAC_07212 Sordaria macrospora SMAC_07212 I 0.470
SOCG_02523 Schizosaccharomyces octosporus SOCG_02523 I 0.462
SPPG_07085 Spizellomyces punctatus SPPG_07085 I 0.000
SS1G_04006 Sclerotinia sclerotiorum SS1G_04006 I 0.000
TDEL_0H02760 Torulaspora delbrueckii TDEL_0H02760 I 0.429
THITE_2111506 Thielavia terrestris THITE_2111506 N 0.000
TRIATDRAFT_28325 Trichoderma atroviride TRIATDRAFT_28325 I 0.000
UM06025 Ustilago maydis UM06025 N 0.000
UV8b_6489 Ustilaginoidea virens UV8b_6489 I 0.000
VDBG_01986 Verticillium alfalfae VDBG_01986 N 0.000
VDBG_01986 Verticillium albo atrum VDBG_01986 N 0.000
X797_003479 Metarhizium robertsii X797_003479 N 0.000
X797_005729 Metarhizium robertsii X797_005729 I 0.000