CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

sox9a *(Tetraodon nigroviridis)* Sox
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00505 (HMG_box)	IPR000910	ENSTNIG00000007413	T329256_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SOX9 M03501_2.00	Homo sapiens	DDACAATRV	BYATTGTHH	SELEX Jolma et al.(2013) SOX9_1	0.741	0.986
SOX9 M03502_2.00	Homo sapiens	AACAATRTGCAGTGTT	AACACTGCAYATTGTT	SELEX Jolma et al.(2013) SOX9_2	0.741	0.986
SOX9 M03503_2.00	Homo sapiens	ATCAATRTKCAGTGAT	ATCACTGMAYATTGAT	SELEX Jolma et al.(2013) SOX9_3	0.741	0.986
SOX9 M03504_2.00	Homo sapiens	ATGAATRTKCAGTCAT	ATGACTGMAYATTCAT	SELEX Jolma et al.(2013) SOX9_4	0.741	0.986
SOX9 M03505_2.00	Homo sapiens	RAACAATTKCAGTGTTH	DAACACTGMAATTGTTY	SELEX Jolma et al.(2013) SOX9_5	0.741	0.986
SOX9 M03506_2.00	Homo sapiens	NATCAATKKYAGTGATN	NATCACTRMMATTGATN	SELEX Jolma et al.(2013) SOX9_6	0.741	0.986
SOX9 M03507_2.00	Homo sapiens	NATGAATTKCAGTCATN	NATGACTGMAATTCATN	SELEX Jolma et al.(2013) SOX9_7	0.741	0.986
SOX9 M05767_2.00	Homo sapiens	HDAACAATRV	BYATTGTTHD	SELEX Yin et al.(2017) SOX9_eDBD_HT-SELEX	0.741	0.986
SOX9 M02716_2.00	Homo sapiens	DAACAATRG	CYATTGTTH	SELEX Mathelier et al.(2014) MA0077.1	0.741	0.986
SOX9 M09389_2.00	Homo sapiens	RMACAAWGVNNBYHTT	AADRVNNBCWTTGTKY	Misc Kulakovskiy et al.(2013) SOX9_HUMAN.H11MO.0.B	0.741	0.986
Sox9 M09399_2.00	Mus musculus	RMACAAWGVNNBYHTT	AADRVNNBCWTTGTKY	Misc Kulakovskiy et al.(2013) SOX9_MOUSE.H11MO.0.A	0.741	0.986
SOX9 M11304_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX9_09	0.741	0.986
SOX9 M11305_2.00	Homo sapiens	NNNDAACAATRRNN	NNYYATTGTTHNNN	Transfac Matys et al.(2006) V$SOX9_B1	0.741	0.986
SOX9 M11306_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX9_Q4	0.741	0.986
SOX9 M11307_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX9_Q5	0.741	0.986
SOX9 M05768_2.00	Homo sapiens	NNNACAATRS	SYATTGTNNN	SELEX Yin et al.(2017) SOX9_eDBD_Methyl-HT-SELEX	0.741	0.986
Sox10 M00826_2.00	Mus musculus	NNNNWBAAT	ATTVWNNNN	PBM Weirauch et al.(2013) pTH1729	0.741	0.942
SOX10 M03491_2.00	Homo sapiens	AACAATTKCAGTGTT	AACACTGMAATTGTT	SELEX Jolma et al.(2013) SOX10_1	0.741	0.942
SOX10 M03492_2.00	Homo sapiens	AACAATRTKCAGTGTT	AACACTGMAYATTGTT	SELEX Jolma et al.(2013) SOX10_2	0.741	0.942
SOX10 M03493_2.00	Homo sapiens	ATCAATTKCAGTGAT	ATCACTGMAATTGAT	SELEX Jolma et al.(2013) SOX10_3	0.741	0.942
SOX10 M03494_2.00	Homo sapiens	ATGAATTKCAGTCAT	ATGACTGMAATTCAT	SELEX Jolma et al.(2013) SOX10_4	0.741	0.942
SOX10 M03495_2.00	Homo sapiens	TGAATGTKCAGTCA	TGACTGMACATTCA	SELEX Jolma et al.(2013) SOX10_5	0.741	0.942
Sox10 M03535_2.00	Mus musculus	AACAATTKCAGTGTT	AACACTGMAATTGTT	SELEX Jolma et al.(2013) Sox10_1	0.741	0.942
Sox10 M03536_2.00	Mus musculus	ATCAATTKCAGTGAT	ATCACTGMAATTGAT	SELEX Jolma et al.(2013) Sox10_2	0.741	0.942
Sox10 M03537_2.00	Mus musculus	ATGAATTDCAGTCAT	ATGACTGHAATTCAT	SELEX Jolma et al.(2013) Sox10_3	0.741	0.942
SOX10 M05759_2.00	Homo sapiens	AACAATRNNNYATTGTT	AACAATRNNNYATTGTT	SELEX Yin et al.(2017) SOX10_eDBD_HT-SELEX	0.741	0.942
SOX10 M05761_2.00	Homo sapiens	NACAATRVNNBYATTGTN	NACAATRVNNBYATTGTN	SELEX Yin et al.(2017) SOX10_FL_HT-SELEX	0.741	0.942
SOX10 M05891_2.00	Homo sapiens	BBCWWTGTTH	DAACAWWGVV	SMiLE-seq Isakova et al.(2017) SOX10	0.741	0.942
SOX10 M08165_2.00	Homo sapiens	NNVACAAAGVN	NBCTTTGTBNN	ChIP-seq Mathelier et al.(2014) MA0442.2	0.741	0.942
SOX10 M09387_2.00	Homo sapiens	VAADRVVNBCWTTGTN	NACAAWGVNBBYHTTB	Misc Kulakovskiy et al.(2013) SOX10_HUMAN.H11MO.0.B	0.741	0.942
Sox10 M09403_2.00	Mus musculus	VAADRVVNBCWTTGTN	NACAAWGVNBBYHTTB	Misc Kulakovskiy et al.(2013) SOX10_MOUSE.H11MO.0.B	0.741	0.942
SOX10 M11296_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX10_Q3	0.741	0.942
SOX10 M11297_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX10_Q6_01	0.741	0.942
SOX10 M11298_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX10_Q6	0.741	0.942
SOX10 M05760_2.00	Homo sapiens	AACAATRSNSYATTGTT	AACAATRSNSYATTGTT	SELEX Yin et al.(2017) SOX10_eDBD_Methyl-HT-SELEX	0.741	0.942
SOX10 M05762_2.00	Homo sapiens	NACAATRVNNBYATTGTN	NACAATRVNNBYATTGTN	SELEX Yin et al.(2017) SOX10_FL_Methyl-HT-SELEX	0.741	0.942
Sox8 M00197_2.00	Mus musculus	NNNWBAAT	ATTVWNNN	PBM Badis et al.(2009) Sox8_1733	0.735	0.971
SOX8 M03483_2.00	Homo sapiens	AACAATRTGCAGTGTT	AACACTGCAYATTGTT	SELEX Jolma et al.(2013) SOX8_1	0.735	0.971
SOX8 M03484_2.00	Homo sapiens	ATGAATTKCAGTC	GACTGMAATTCAT	SELEX Jolma et al.(2013) SOX8_2	0.735	0.971
SOX8 M03485_2.00	Homo sapiens	RAACAATTKCAGTGTTN	NAACACTGMAATTGTTY	SELEX Jolma et al.(2013) SOX8_3	0.735	0.971
SOX8 M03486_2.00	Homo sapiens	HATCAATTKCAGTGATN	NATCACTGMAATTGATD	SELEX Jolma et al.(2013) SOX8_4	0.735	0.971
SOX8 M03487_2.00	Homo sapiens	TGAATRTKCAGTCA	TGACTGMAYATTCA	SELEX Jolma et al.(2013) SOX8_5	0.735	0.971
SOX8 M03488_2.00	Homo sapiens	AACAATTDCAGTGTT	AACACTGHAATTGTT	SELEX Jolma et al.(2013) SOX8_6	0.735	0.971
SOX8 M03489_2.00	Homo sapiens	ATGAATTKCAGTC	GACTGMAATTCAT	SELEX Jolma et al.(2013) SOX8_7	0.735	0.971
SOX8 M03490_2.00	Homo sapiens	MATCAATTGCAGTGATK	MATCACTGCAATTGATK	SELEX Jolma et al.(2013) SOX8_8	0.735	0.971
SOX8 M05749_2.00	Homo sapiens	NDAACAATRV	BYATTGTTHN	SELEX Yin et al.(2017) SOX8_eDBD_HT-SELEX	0.735	0.971
SOX8 M05751_2.00	Homo sapiens	ACAATRVNNBYATTGT	ACAATRVNNBYATTGT	SELEX Yin et al.(2017) SOX8_FL_HT-SELEX	0.735	0.971
SOX8 M05750_2.00	Homo sapiens	BYATTGTTNN	NNAACAATRV	SELEX Yin et al.(2017) SOX8_eDBD_Methyl-HT-SELEX	0.735	0.971
SOX8 M05752_2.00	Homo sapiens	ACAATRVNNBYATTGT	ACAATRVNNBYATTGT	SELEX Yin et al.(2017) SOX8_FL_Methyl-HT-SELEX	0.735	0.971
Sox18 M00204_2.00	Mus musculus	NNNWBAAT	ATTVWNNN	PBM Badis et al.(2009) Sox18_3506	0.663	0.710
SOX18 M03529_2.00	Homo sapiens	AACAATDNCATTGTT	AACAATGNHATTGTT	SELEX Jolma et al.(2013) SOX18_1	0.663	0.710
SOX18 M03530_2.00	Homo sapiens	ATCAATWDCATTGAT	ATCAATGHWATTGAT	SELEX Jolma et al.(2013) SOX18_2	0.663	0.710
SOX18 M03531_2.00	Homo sapiens	ATGAATWYCATTCAT	ATGAATGRWATTCAT	SELEX Jolma et al.(2013) SOX18_3	0.663	0.710
SOX18 M05791_2.00	Homo sapiens	VACRAYGV	BCRTYGTB	SELEX Yin et al.(2017) SOX18_eDBD_HT-SELEX	0.663	0.710
SOX18 M11334_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX18_Q5_01	0.663	0.710
SOX18 M11335_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX18_Q5	0.663	0.710
SOX18 M05792_2.00	Homo sapiens	BYATTGTN	NACAATRV	SELEX Yin et al.(2017) SOX18_eDBD_Methyl-HT-SELEX	0.663	0.710
Sox17 M00199_2.00	Mus musculus	NNNNWSAAT	ATTSWNNNN	PBM Badis et al.(2009) Sox17_2837	0.656	0.710
Sox17 M03533_2.00	Mus musculus	AACAATWDCATTGTT	AACAATGHWATTGTT	SELEX Jolma et al.(2013) Sox17_1	0.656	0.710
Sox17 M03534_2.00	Mus musculus	ATGAATWNCATTCAT	ATGAATGNWATTCAT	SELEX Jolma et al.(2013) Sox17_2	0.656	0.710
SOX17 M05896_2.00	Homo sapiens	DRACAATRVN	NBYATTGTYH	SMiLE-seq Isakova et al.(2017) SOX17	0.656	0.710
Sox17 M02718_2.00	Mus musculus	SACAATRNN	NNYATTGTS	SELEX Mathelier et al.(2014) MA0078.1	0.656	0.710
Sox17 M08040_2.00	Mus musculus	RVACAAWRRVN	NBYYWTTGTBY	ChIP-seq Chen et al.(2011) GSE19026_Sox17_XENcells	0.656	0.710
SOX17 M09396_2.00	Homo sapiens	BCCATTKTNBN	NVNAMAATGGV	Misc Kulakovskiy et al.(2013) SOX17_HUMAN.H11MO.0.C	0.656	0.710
SOX17 M11323_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX17_01	0.656	0.710
SOX17 M11324_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX17_Q2	0.656	0.710
Sox7 M00209_2.00	Mus musculus	NNNWBAAT	ATTVWNNN	PBM Badis et al.(2009) Sox7_3460	0.647	0.638
SOX7 M03516_2.00	Homo sapiens	AACAATRDNHAKTGTT	AACAMTDNHYATTGTT	SELEX Jolma et al.(2013) SOX7_1	0.647	0.638
SOX7 M03517_2.00	Homo sapiens	DAACAATKDYAKTGTTN	NAACAMTRHMATTGTTH	SELEX Jolma et al.(2013) SOX7_2	0.647	0.638
SOX7 M03518_2.00	Homo sapiens	NATGAATKDCAKTCATN	NATGAMTGHMATTCATN	SELEX Jolma et al.(2013) SOX7_3	0.647	0.638
SOX7 M05787_2.00	Homo sapiens	ACAATDNHATTGT	ACAATDNHATTGT	SELEX Yin et al.(2017) SOX7_eDBD_HT-SELEX	0.647	0.638
SOX7 M11325_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX7_Q2	0.647	0.638
SOX7 M05788_2.00	Homo sapiens	ACAATDNHATTGT	ACAATDNHATTGT	SELEX Yin et al.(2017) SOX7_eDBD_Methyl-HT-SELEX	0.647	0.638
SOX21 M03497_2.00	Homo sapiens	AACAATKKYAKTGTT	AACAMTRMMATTGTT	SELEX Jolma et al.(2013) SOX21_1	0.619	0.652
SOX21 M03498_2.00	Homo sapiens	AACAATRKDYAKTGTT	AACAMTRHMYATTGTT	SELEX Jolma et al.(2013) SOX21_2	0.619	0.652
SOX21 M03499_2.00	Homo sapiens	TCAATGDYAKTGA	TCAMTRHCATTGA	SELEX Jolma et al.(2013) SOX21_3	0.619	0.652
SOX21 M03500_2.00	Homo sapiens	TGAATGKYAKTCA	TGAMTRMCATTCA	SELEX Jolma et al.(2013) SOX21_4	0.619	0.652
Sox14 M00829_2.00	Mus musculus	NAACAATD	HATTGTTN	PBM Weirauch et al.(2013) pTH2677	0.617	0.623
Sox14 M00206_2.00	Mus musculus	NNNABAAW	WTTVTNNN	PBM Badis et al.(2009) Sox14_2677	0.617	0.623
SOX14 M03513_2.00	Homo sapiens	ACAMTAMCATTG	CAATGKTAKTGT	SELEX Jolma et al.(2013) SOX14_1	0.617	0.623
SOX14 M03514_2.00	Homo sapiens	NTGAATANCATTCAN	NTGAATGNTATTCAN	SELEX Jolma et al.(2013) SOX14_2	0.617	0.623
SOX14 M03515_2.00	Homo sapiens	TCAATWVCATTGA	TCAATGBWATTGA	SELEX Jolma et al.(2013) SOX14_3	0.617	0.623
SOX14 M05783_2.00	Homo sapiens	NYATTGWNNN	NNNWCAATRN	SELEX Yin et al.(2017) SOX14_eDBD_HT-SELEX	0.617	0.623
SOX14 M05785_2.00	Homo sapiens	NCGAACAATK	MATTGTTCGN	SELEX Yin et al.(2017) SOX14_FL_HT-SELEX	0.617	0.623
SOX14 M05784_2.00	Homo sapiens	NYATTGTNNN	NNNACAATRN	SELEX Yin et al.(2017) SOX14_eDBD_Methyl-HT-SELEX	0.617	0.623
SOX14 M05786_2.00	Homo sapiens	NATTGTTYGB	VCRAACAATN	SELEX Yin et al.(2017) SOX14_FL_Methyl-HT-SELEX	0.617	0.623
SOX15 M03508_2.00	Homo sapiens	AACAATAMCATTGTT	AACAATGKTATTGTT	SELEX Jolma et al.(2013) SOX15_1	0.608	0.667
SOX15 M03509_2.00	Homo sapiens	ATCAATAMCATTGAT	ATCAATGKTATTGAT	SELEX Jolma et al.(2013) SOX15_2	0.608	0.667
SOX15 M03510_2.00	Homo sapiens	ATGAATAACATTCAT	ATGAATGTTATTCAT	SELEX Jolma et al.(2013) SOX15_3	0.608	0.667
SOX15 M05893_2.00	Homo sapiens	YYWTTGTNHN	NDNACAAWRR	SMiLE-seq Isakova et al.(2017) SOX15	0.608	0.667
SOX15 M11308_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX15_Q3	0.608	0.667
Sox21 M00208_2.00	Mus musculus	WTTVWNNNN	NNNNWBAAW	PBM Badis et al.(2009) Sox21_3417	0.591	0.638
SOX2 M03519_2.00	Homo sapiens	DAACAATGKYAKTGTTN	NAACAMTRMCATTGTTH	SELEX Jolma et al.(2013) SOX2_1	0.591	0.638
SOX2 M03520_2.00	Homo sapiens	VTGAATGDYATTCAN	NTGAATRHCATTCAB	SELEX Jolma et al.(2013) SOX2_2	0.591	0.638
SOX2 M03521_2.00	Homo sapiens	NATCAATGNYATTGAWD	HWTCAATRNCATTGATN	SELEX Jolma et al.(2013) SOX2_3	0.591	0.638
SOX2 M03522_2.00	Homo sapiens	NAACAATANCATTGTTH	DAACAATGNTATTGTTN	SELEX Jolma et al.(2013) SOX2_4	0.591	0.638
SOX2 M03523_2.00	Homo sapiens	HATCAATANCATTGATH	DATCAATGNTATTGATD	SELEX Jolma et al.(2013) SOX2_5	0.591	0.638
SOX2 M03524_2.00	Homo sapiens	DTGAATWNCATTCAH	DTGAATGNWATTCAH	SELEX Jolma et al.(2013) SOX2_6	0.591	0.638
SOX2 M05897_2.00	Homo sapiens	NACAAWRRNN	NNYYWTTGTN	SMiLE-seq Isakova et al.(2017) SOX2	0.591	0.638
Sox2 M08170_2.00	Mus musculus	CCWTTGTB	VACAAWGG	ChIP-seq Mathelier et al.(2014) MA0143.3	0.591	0.638
Sox2 M08041_2.00	Mus musculus	WHWRMADNACAAWRR	YYWTTGTNHTKYWDW	ChIP-seq Chen et al.(2011) SRP000217_Sox2	0.591	0.638
Sox2 M08042_2.00	Mus musculus	TTWRCATNWSAAWRV	BYWTTSWNATGYWAA	ChIP-seq Chen et al.(2011) SRP000712_Sox2	0.591	0.638
SOX2 M09397_2.00	Homo sapiens	BBYYWTTGTBYBB	VVRVACAAWRRVV	Misc Kulakovskiy et al.(2013) SOX2_HUMAN.H11MO.0.A	0.591	0.638
Sox2 M09409_2.00	Mus musculus	THWRCATNACAAWRRV	BYYWTTGTNATGYWDA	Misc Kulakovskiy et al.(2013) SOX2_MOUSE.H11MO.0.A	0.591	0.638
SOX2 M11327_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q3_01	0.591	0.638
SOX2 M11328_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q3	0.591	0.638
SOX2 M11329_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q4	0.591	0.638
SOX2 M11330_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX2_Q6	0.591	0.638
SoxN M03976_2.00	Drosophila melanogaster	VYGHACARTNN	NNAYTGTDCRB	SELEX Nitta et al.(2015) SoxN_1	0.591	0.623
SoxN M03977_2.00	Drosophila melanogaster	NCAATNVCATTGN	NCAATGBNATTGN	SELEX Nitta et al.(2015) SoxN_2	0.591	0.623
Sox1 M00214_2.00	Mus musculus	NNNNNWBAAW	WTTVWNNNNN	PBM Badis et al.(2009) Sox1_2631	0.591	0.609
Sox1 M03542_2.00	Mus musculus	VACAATWNCATTGTT	AACAATGNWATTGTB	SELEX Jolma et al.(2013) Sox1_1	0.591	0.609
Sox1 M03543_2.00	Mus musculus	NTGAATWNCATTCAN	NTGAATGNWATTCAN	SELEX Jolma et al.(2013) Sox1_2	0.591	0.609
Sox1 M03544_2.00	Mus musculus	TCAATWNCATTGA	TCAATGNWATTGA	SELEX Jolma et al.(2013) Sox1_3	0.591	0.609
Sox1 M03545_2.00	Mus musculus	TGAATDDNHATTCA	TGAATDNHHATTCA	SELEX Jolma et al.(2013) Sox1_4	0.591	0.609
Sox21b M03983_2.00	Drosophila melanogaster	NAACAMTWNCAKTGTTB	VAACAMTGNWAKTGTTN	SELEX Nitta et al.(2015) Sox21b_1	0.590	0.623
D M03969_2.00	Drosophila melanogaster	AMVGAACAAT	ATTGTTCBKT	SELEX Nitta et al.(2015) D_1	0.590	0.609
D M03970_2.00	Drosophila melanogaster	NAACAATDNCATTGTTN	NAACAATGNHATTGTTN	SELEX Nitta et al.(2015) D_2	0.590	0.609
Sox21a M03978_2.00	Drosophila melanogaster	NMACAMTAVCATTGTKN	NMACAATGBTAKTGTKN	SELEX Nitta et al.(2015) Sox21a_1	0.590	0.609
Sox21a M03979_2.00	Drosophila melanogaster	NNACAMTANCATTGTYH	DRACAATGNTAKTGTNN	SELEX Nitta et al.(2015) Sox21a_2	0.590	0.609
D M06559_2.00	Drosophila melanogaster	BCYWTTGTTNT	ANAACAAWRGV	B1H Mathelier et al.(2014) MA0445.1	0.590	0.609
D M06448_2.00	Drosophila melanogaster	BCYATTGTYNW	WNRACAATRGV	B1H Zhu et al.(2011) D_NAR_FBgn0000411	0.590	0.609
D M09694_2.00	Drosophila melanogaster	RACAAWRGVH	DBCYWTTGTY	Misc Kulakovskiy et al.(2009) D	0.590	0.609
Sox15 M03973_2.00	Drosophila melanogaster	WYTGTTCGGTD	HACCGAACARW	SELEX Nitta et al.(2015) Sox15_1	0.587	0.652
Sox15 M03974_2.00	Drosophila melanogaster	VACAATDNCATTGTN	NACAATGNHATTGTB	SELEX Nitta et al.(2015) Sox15_2	0.587	0.652
Sox15 M06450_2.00	Drosophila melanogaster	RWACAATR	YATTGTWY	B1H Zhu et al.(2011) Sox15_SANGER_5_FBgn0005613	0.587	0.652
Sox3 M00827_2.00	Mus musculus	WDTVHNNN	NNNDBAHW	PBM Weirauch et al.(2013) pTH3087	0.581	0.609
Sox3 M03538_2.00	Mus musculus	RAACAATRNYATTGTTK	MAACAATRNYATTGTTY	SELEX Jolma et al.(2013) Sox3_1	0.581	0.609
Sox3 M03539_2.00	Mus musculus	BATCAATGBYATTGATD	HATCAATRVCATTGATV	SELEX Jolma et al.(2013) Sox3_2	0.581	0.609
Sox3 M03540_2.00	Mus musculus	DATGAATKNYATTCATR	YATGAATRNMATTCATH	SELEX Jolma et al.(2013) Sox3_3	0.581	0.609
SOX3 M05769_2.00	Homo sapiens	VYATTKTNVS	SBNAMAATRB	SELEX Yin et al.(2017) SOX3_FL_HT-SELEX	0.581	0.609
Sox3 M08168_2.00	Mus musculus	CCTTTGTYYB	VRRACAAAGG	ChIP-seq Mathelier et al.(2014) MA0514.1	0.581	0.609
SOX3 M09391_2.00	Homo sapiens	BYCWTTGTBYB	VRVACAAWGRV	Misc Kulakovskiy et al.(2013) SOX3_HUMAN.H11MO.0.B	0.581	0.609
Sox3 M09405_2.00	Mus musculus	VRVACAAWGGV	BCCWTTGTBYB	Misc Kulakovskiy et al.(2013) SOX3_MOUSE.H11MO.0.C	0.581	0.609
Sox3 M09639_2.00	Mus musculus	VACAAWRG	CYWTTGTB	Misc Heinz et al.(2010) NPC-Sox3_GSE33059	0.581	0.609
SOX3 M05770_2.00	Homo sapiens	BYATTGTBNN	NNVACAATRV	SELEX Yin et al.(2017) SOX3_FL_Methyl-HT-SELEX	0.581	0.609
Sox15 M00202_2.00	Mus musculus	WTTVWNNNN	NNNNWBAAW	PBM Badis et al.(2009) Sox15_3457	0.580	0.638
Sox5 M00203_2.00	Mus musculus	ATTGTBNN	NNVACAAT	PBM Badis et al.(2009) Sox5_3459	0.574	0.507
Sox13 M00212_2.00	Mus musculus	RAACAATW	WATTGTTY	PBM Badis et al.(2009) Sox13_1718	0.574	0.507
SOX5 M05894_2.00	Homo sapiens	DVACAATRVN	NBYATTGTBH	SMiLE-seq Isakova et al.(2017) SOX5	0.574	0.507
Sox5 M02719_2.00	Mus musculus	NAACAAT	ATTGTTN	SELEX Mathelier et al.(2014) MA0087.1	0.574	0.507
SOX13 M08166_2.00	Homo sapiens	NNACAATGVNN	NNBCATTGTNN	ChIP-seq Mathelier et al.(2014) MA1120.1	0.574	0.507
SOX5 M09390_2.00	Homo sapiens	NAACAATN	NATTGTTN	Misc Kulakovskiy et al.(2013) SOX5_HUMAN.H11MO.0.C	0.574	0.507
Sox5 M09404_2.00	Mus musculus	NAACAATN	NATTGTTN	Misc Kulakovskiy et al.(2013) SOX5_MOUSE.H11MO.0.C	0.574	0.507
SOX5 M11309_2.00	Homo sapiens	NNAACAATNN	NNATTGTTNN	Transfac Matys et al.(2006) V$SOX5_01	0.574	0.507
SOX5 M11310_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX5_Q5	0.574	0.507
Sox12 M00205_2.00	Mus musculus	HWTTGTBNNN	NNNVACAAWD	PBM Badis et al.(2009) Sox12_3957	0.571	0.652
SOX12 M05789_2.00	Homo sapiens	NATTGTTCGGK	MCCGAACAATN	SELEX Yin et al.(2017) SOX12_eDBD_HT-SELEX	0.571	0.652
SOX12 M05790_2.00	Homo sapiens	YATTGTTCBKT	AMVGAACAATR	SELEX Yin et al.(2017) SOX12_eDBD_Methyl-HT-SELEX	0.571	0.652
SOX4 M01026_2.00	Homo sapiens	AACAAWGR	YCWTTGTT	PBM Scharer et al.(2009) Sox4	0.571	0.623
Sox4 M00213_2.00	Mus musculus	NNVACAAWD	HWTTGTBNN	PBM Badis et al.(2009) Sox4_2941	0.571	0.623
SOX4 M03496_2.00	Homo sapiens	NAACAATTKCAGTGTT	AACACTGMAATTGTTN	SELEX Jolma et al.(2013) SOX4_1	0.571	0.623
SOX4 M05765_2.00	Homo sapiens	NRACAAWGVV	BBCWTTGTYN	SELEX Yin et al.(2017) SOX4_eDBD_HT-SELEX	0.571	0.623
SOX4 M09388_2.00	Homo sapiens	BYCTTTGTYYBB	VVRRACAAAGRV	Misc Kulakovskiy et al.(2013) SOX4_HUMAN.H11MO.0.B	0.571	0.623
Sox4 M09410_2.00	Mus musculus	BYCTTTGTYYBB	VVRRACAAAGRV	Misc Kulakovskiy et al.(2013) SOX4_MOUSE.H11MO.0.A	0.571	0.623
Sox4 M09641_2.00	Mus musculus	BCWTTGTYCN	NGRACAAWGV	Misc Heinz et al.(2010) proB-Sox4_GSE50066	0.571	0.623
SOX4 M11301_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX4_Q3	0.571	0.623
SOX4 M11302_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX4_Q5_02	0.571	0.623
SOX4 M11303_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX4_Q5	0.571	0.623
SOX4 M05766_2.00	Homo sapiens	NRACAAWGVV	BBCWTTGTYN	SELEX Yin et al.(2017) SOX4_eDBD_Methyl-HT-SELEX	0.571	0.623
Sox11 M00210_2.00	Mus musculus	WTTGTBNNN	NNNVACAAW	PBM Badis et al.(2009) Sox11_2266	0.571	0.609
Sox11 M03541_2.00	Mus musculus	AACAATTKCAGTGTT	AACACTGMAATTGTT	SELEX Jolma et al.(2013) Sox11_1	0.571	0.609
SOX11 M11326_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX11_Q6	0.571	0.609
sem-2 M02488_2.00	Caenorhabditis elegans	NNNHVNNNNN	NNNNNBDNNN	PBM Weirauch et al.(2014) pTH9043	0.566	0.623
Sox14 M03971_2.00	Drosophila melanogaster	BTGTWCGGTR	YACCGWACAV	SELEX Nitta et al.(2015) Sox14_1	0.564	0.551
Sox14 M03972_2.00	Drosophila melanogaster	VACAATDNCATTGTB	VACAATGNHATTGTB	SELEX Nitta et al.(2015) Sox14_2	0.564	0.551
Sox14 M06449_2.00	Drosophila melanogaster	VYYCTTTGTYC	GRACAAAGRRB	B1H Zhu et al.(2011) Sox14_SANGER_10_FBgn0005612	0.564	0.551
egl-13 M00710_2.00	Caenorhabditis elegans	NNAACAATWN	NWATTGTTNN	PBM Narasimhan et al.(2015) pTH9125	0.555	0.507
Sry M00211_2.00	Mus musculus	ATTRTNNNNN	NNNNNAYAAT	PBM Badis et al.(2009) Sry_2833	0.548	0.565
Sry M09408_2.00	Mus musculus	BWTTGTTWH	DWAACAAWV	Misc Kulakovskiy et al.(2013) SRY_MOUSE.H11MO.0.B	0.548	0.565
Sox6 M00828_2.00	Mus musculus	WTTGTNNNN	NNNNACAAW	PBM Weirauch et al.(2013) pTH3862	0.547	0.478
SOX6 M05892_2.00	Homo sapiens	DRACAATRVN	NBYATTGTYH	SMiLE-seq Isakova et al.(2017) SOX6	0.547	0.478
Sox6 M08169_2.00	Mus musculus	BCWTTGTYYY	RRRACAAWGV	ChIP-seq Mathelier et al.(2014) MA0515.1	0.547	0.478
Sox6 M09640_2.00	Mus musculus	BHWTTGTBNN	NNVACAAWDV	Misc Heinz et al.(2010) Myotubes-Sox6_GSE32627	0.547	0.478
SOX6 M11300_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SOX6_Q5	0.547	0.478
SRY M03525_2.00	Homo sapiens	AACAATANCATTGTT	AACAATGNTATTGTT	SELEX Jolma et al.(2013) SRY_1	0.538	0.507
SRY M03526_2.00	Homo sapiens	AACAATHHNCATTGTT	AACAATGNDDATTGTT	SELEX Jolma et al.(2013) SRY_2	0.538	0.507
SRY M03527_2.00	Homo sapiens	TCAATAMCATTGA	TCAATGKTATTGA	SELEX Jolma et al.(2013) SRY_3	0.538	0.507
SRY M03528_2.00	Homo sapiens	TGAATANCATTCA	TGAATGNTATTCA	SELEX Jolma et al.(2013) SRY_4	0.538	0.507
SRY M05898_2.00	Homo sapiens	NACAATNV	BNATTGTN	SMiLE-seq Isakova et al.(2017) SRY	0.538	0.507
SRY M02717_2.00	Homo sapiens	NDWAACAAW	WTTGTWWHN	SELEX Mathelier et al.(2014) MA0084.1	0.538	0.507
SRY M09398_2.00	Homo sapiens	BWTTGTTWH	DWAACAAWV	Misc Kulakovskiy et al.(2013) SRY_HUMAN.H11MO.0.B	0.538	0.507
SRY M11331_2.00	Homo sapiens	AAWSWMM	KKWSWTT	Transfac Matys et al.(2006) V$SRY_01	0.538	0.507
SRY M11332_2.00	Homo sapiens	HBHWTTGTTWDN	NHWAACAAWDVD	Transfac Matys et al.(2006) V$SRY_02	0.538	0.507
SRY M11333_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SRY_Q6	0.538	0.507
Sox102F M03981_2.00	Drosophila melanogaster	ATTGTTCGGTGKN	NMCACCGAACAAT	SELEX Nitta et al.(2015) Sox102F_1	0.523	0.478
Sox102F M03982_2.00	Drosophila melanogaster	NAACAATDDCATTGTTN	NAACAATGHHATTGTTN	SELEX Nitta et al.(2015) Sox102F_2	0.523	0.478
Sox30 M00201_2.00	Mus musculus	ATTRTBNNNN	NNNNVAYAAT	PBM Badis et al.(2009) Sox30_2781	0.489	0.449
SOX30 M05753_2.00	Homo sapiens	NRACAATN	NATTGTYN	SELEX Yin et al.(2017) SOX30_eDBD_HT-SELEX	0.489	0.449
SOX30 M05754_2.00	Homo sapiens	BATTGTYN	NRACAATV	SELEX Yin et al.(2017) SOX30_eDBD_Methyl-HT-SELEX	0.489	0.449
ROX1 M00070_2.00	Saccharomyces cerevisiae	NRAACAATWNN	NNWATTGTTYN	PBM Badis et al.(2008) ROX1_2099	0.470	0.333
ROX1 M07498_2.00	Saccharomyces cerevisiae	YYHATTGTTYTS	SARAACAATDRR	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0371.1	0.470	0.333
ROX1 M08607_2.00	Saccharomyces cerevisiae	BYATTGTN	NACAATRV	Misc DeBoer et al.(2011) YPR065W_1396	0.470	0.333
ROX1 M11346_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$ROX1_Q6_01	0.470	0.333
ROX1 M11347_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$ROX1_Q6	0.470	0.333
gei-3 M00711_2.00	Caenorhabditis elegans	NWNWMWDN	NHWKWNWN	PBM Narasimhan et al.(2015) pTH10038	0.437	0.391
mat1-Mc M11340_2.00	Schizosaccharomyces pombe	NRMNNAACAAAGAVRYMW	AKRYBTCTTTGTTNNKYN	Transfac Matys et al.(2006) F$MAT1MC_01	0.430	0.290
mat1-Mc M11341_2.00	Schizosaccharomyces pombe	YYHATTGTYD	HRACAATDRR	Transfac Matys et al.(2006) F$MAT1MC_02	0.430	0.290
For this family, TFs with SR scores > 0.415* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSTNIP00000010219	Sox	112	180	VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEVEKRPFVEEAERLRVQHKKDHPDYK

Links
Other Sox family TFs
Other *Tetraodon nigroviridis* TFs

2083 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
27965.m000108	Ricinus communis	27965.m000108	I	0.000
29863.m001066	Ricinus communis	29863.m001066	I	0.000
30131.m006971	Ricinus communis	30131.m006971	I	0.000
30147.m014403	Ricinus communis	30147.m014403	I	0.000
ABR1	Arabidopsis thaliana	AT5G64750	D	0.000
ABR1	Arabidopsis lyrata	fgenesh2_kg.8__2506__AT5G64750.1	I	0.000
ABR1	Vitis vinifera	VIT_07s0031g01980	I	0.000
AMTR_s00017p00232330	Amborella trichopoda	AMTR_s00017p00232330	I	0.000
Aquca_013_00161	Aquilegia coerulea	Aquca_013_00161	I	0.000
Aquca_023_00168	Aquilegia coerulea	Aquca_023_00168	I	0.000
Aquca_043_00039	Aquilegia coerulea	Aquca_043_00039	I	0.000
ATERF2	Arabidopsis lyrata	fgenesh2_kg.8__70__AT5G47220.1	I	0.000
BGIOSGA000428	Oryza indica	BGIOSGA000428	I	0.000
BGIOSGA006362	Oryza indica	BGIOSGA006362	I	0.000
BGIOSGA019928	Oryza indica	BGIOSGA019928	I	0.000
BGIOSGA034432	Oryza indica	BGIOSGA034432	I	0.000
Bo2g008570	Brassica oleracea	Bo2g008570	I	0.000
Bo2g161710	Brassica oleracea	Bo2g161710	I	0.000
Bo2g166380	Brassica oleracea	Bo2g166380	I	0.000
Bo3g004290	Brassica oleracea	Bo3g004290	I	0.000
Bo3g100930	Brassica oleracea	Bo3g100930	I	0.000
Bo3g109240	Brassica oleracea	Bo3g109240	I	0.000
Bo9g175390	Brassica oleracea	Bo9g175390	I	0.000
Bostr.0568s0320	Boechera stricta	Bostr.0568s0320	I	0.000
Bostr.12302s0024	Boechera stricta	Bostr.12302s0024	I	0.000
Bostr.13129s0235	Boechera stricta	Bostr.13129s0235	I	0.000
Bostr.15774s0146	Boechera stricta	Bostr.15774s0146	I	0.000
Bostr.26833s0047	Boechera stricta	Bostr.26833s0047	I	0.000
Bostr.7200s0089	Boechera stricta	Bostr.7200s0089	I	0.000
Bra005932	Brassica rapa	Bra005932	I	0.000
Bra009272	Brassica rapa	Bra009272	I	0.000
Bra019622	Brassica rapa	Bra019622	I	0.000
Bra024325	Brassica rapa	Bra024325	I	0.000
Bra028703	Brassica rapa	Bra028703	I	0.000
Bra029302	Brassica rapa	Bra029302	I	0.000
Bra031903	Brassica rapa	Bra031903	I	0.000
Bra037794	Brassica rapa	Bra037794	I	0.000
BRADI2G24170	Brachypodium distachyon	BRADI2G24170	I	0.000
BRADI2G56140	Brachypodium distachyon	BRADI2G56140	I	0.000
Cagra.14503s0008	Capsella grandiflora	Cagra.14503s0008	I	0.000
Cagra.2438s0028	Capsella grandiflora	Cagra.2438s0028	I	0.000
Cagra.2662s0009	Capsella grandiflora	Cagra.2662s0009	I	0.000
Cagra.3842s0001	Capsella grandiflora	Cagra.3842s0001	I	0.000
Cagra.4553s0019	Capsella grandiflora	Cagra.4553s0019	I	0.000
Carubv10002723m.g	Capsella rubella	Carubv10002723m.g	I	0.000
Carubv10010478m.g	Capsella rubella	Carubv10010478m.g	I	0.000
Carubv10026540m.g	Capsella rubella	Carubv10026540m.g	I	0.000
Carubv10027012m.g	Capsella rubella	Carubv10027012m.g	I	0.000
Carubv10028647m.g	Capsella rubella	Carubv10028647m.g	I	0.000
cassava10717.m1	Manihot esculenta	cassava10717.m1	I	0.000
cassava12737.valid.m1	Manihot esculenta	cassava12737.valid.m1	I	0.000
cassava14079.valid.m1	Manihot esculenta	cassava14079.valid.m1	I	0.000
cassava19042.valid.m1	Manihot esculenta	cassava19042.valid.m1	I	0.000
cassava19043.valid.m1	Manihot esculenta	cassava19043.valid.m1	I	0.000
cassava19959.m1	Manihot esculenta	cassava19959.m1	I	0.000
cassava21882.m1	Manihot esculenta	cassava21882.m1	I	0.000
cassava40570.m1	Manihot esculenta	cassava40570.m1	I	0.000
cassava45576.m1	Manihot esculenta	cassava45576.m1	I	0.000
cassava8409.m1	Manihot esculenta	cassava8409.m1	I	0.000
Ca_01387	Cicer arietinum	Ca_01387	I	0.000
Ca_04147	Cicer arietinum	Ca_04147	I	0.000
Ca_04370	Cicer arietinum	Ca_04370	I	0.000
Ca_09638	Cicer arietinum	Ca_09638	I	0.000
Ca_18387	Cicer arietinum	Ca_18387	I	0.000
Ca_19135	Cicer arietinum	Ca_19135	I	0.000
Ca_21773	Cicer arietinum	Ca_21773	I	0.000
chr1.CM0032.40.nd	Lotus japonicus	chr1.CM0032.40.nd	I	0.000
chr1.CM0094.670.nd	Lotus japonicus	chr1.CM0094.670.nd	I	0.000
chr1.CM1880.220.nd	Lotus japonicus	chr1.CM1880.220.nd	I	0.000
chr2.LjT11L13.40.nc	Lotus japonicus	chr2.LjT11L13.40.nc	I	0.000
chr4.CM0175.50.nd	Lotus japonicus	chr4.CM0175.50.nd	I	0.000
chr5.CM0052.240.nd	Lotus japonicus	chr5.CM0052.240.nd	I	0.000
Ciclev10001138m.g	Citrus clementina	Ciclev10001138m.g	I	0.000
Ciclev10003903m.g	Citrus clementina	Ciclev10003903m.g	I	0.000
Ciclev10018158m.g	Citrus clementina	Ciclev10018158m.g	I	0.000
Ciclev10026032m.g	Citrus clementina	Ciclev10026032m.g	I	0.000
Ciclev10026052m.g	Citrus clementina	Ciclev10026052m.g	I	0.000
Ciclev10032575m.g	Citrus clementina	Ciclev10032575m.g	I	0.000
Cla003851	Citrullus lanatus	Cla003851	I	0.000
Cla007205	Citrullus lanatus	Cla007205	I	0.000
Cla007885	Citrullus lanatus	Cla007885	I	0.000
Cla008608	Citrullus lanatus	Cla008608	I	0.000
Cla014021	Citrullus lanatus	Cla014021	I	0.000
Cla019618	Citrullus lanatus	Cla019618	I	0.000
Cucsa.101370	Cucumis sativus	Cucsa.101370	I	0.000
Cucsa.156890	Cucumis sativus	Cucsa.156890	I	0.000
Cucsa.250290	Cucumis sativus	Cucsa.250290	I	0.000
Cucsa.349200	Cucumis sativus	Cucsa.349200	I	0.000
Cucsa.363830	Cucumis sativus	Cucsa.363830	I	0.000
Cucsa.365850	Cucumis sativus	Cucsa.365850	I	0.000
ERF11	Arabidopsis lyrata	fgenesh2_kg.1__3005__AT1G28370.1	I	0.000
ERF110	Arabidopsis thaliana	AT5G50080	I	0.000
ERF110	Arabidopsis lyrata	fgenesh2_kg.8__881__AT5G50080.1	I	0.000
ERF110	Vitis vinifera	VIT_18s0072g00260	I	0.000
ERF114	Arabidopsis thaliana	AT5G61890	I	0.000
ERF115	Arabidopsis thaliana	AT5G07310	D	0.000
Eucgr.F02691	Eucalyptus grandis	Eucgr.F02691	I	0.000
Eucgr.F04203	Eucalyptus grandis	Eucgr.F04203	I	0.000
Eucgr.G01970	Eucalyptus grandis	Eucgr.G01970	I	0.000
Eucgr.H04892	Eucalyptus grandis	Eucgr.H04892	I	0.000
Eucgr.I00292	Eucalyptus grandis	Eucgr.I00292	I	0.000
Eucgr.K02193	Eucalyptus grandis	Eucgr.K02193	I	0.000
Eucgr.K02780	Eucalyptus grandis	Eucgr.K02780	I	0.000
evm.TU.supercontig_13.175	Carica papaya	evm.TU.supercontig_13.175	I	0.000
evm.TU.supercontig_49.94	Carica papaya	evm.TU.supercontig_49.94	I	0.000
evm.TU.supercontig_72.47	Carica papaya	evm.TU.supercontig_72.47	I	0.000
fgenesh2_kg.6__690__AT5G07310.1	Arabidopsis lyrata	fgenesh2_kg.6__690__AT5G07310.1	I	0.000
gene06406-v1.0-hybrid	Fragaria vesca	gene06406-v1.0-hybrid	I	0.000
gene06407-v1.0-hybrid	Fragaria vesca	gene06407-v1.0-hybrid	I	0.000
gene21091-v1.0-hybrid	Fragaria vesca	gene21091-v1.0-hybrid	I	0.000
gene27604-v1.0-hybrid	Fragaria vesca	gene27604-v1.0-hybrid	I	0.000
GLYMA02G07310	Glycine max	GLYMA02G07310	I	0.000
GLYMA02G08835	Glycine max	GLYMA02G08835	I	0.000
GLYMA04G39510	Glycine max	GLYMA04G39510	I	0.000
GLYMA05G32040	Glycine max	GLYMA05G32040	I	0.000
GLYMA05G33440	Glycine max	GLYMA05G33440	I	0.000
GLYMA06G15341	Glycine max	GLYMA06G15341	I	0.000
GLYMA06G17180	Glycine max	GLYMA06G17180	I	0.000
GLYMA10G36760	Glycine max	GLYMA10G36760	I	0.000
GLYMA16G05190	Glycine max	GLYMA16G05190	I	0.000
GLYMA16G26320	Glycine max	GLYMA16G26320	I	0.000
GLYMA16G27950	Glycine max	GLYMA16G27950	I	0.000
GLYMA19G27790	Glycine max	GLYMA19G27790	I	0.000
GLYMA20G30835	Glycine max	GLYMA20G30835	I	0.000
Gorai.003G048800	Gossypium raimondii	Gorai.003G048800	I	0.000
Gorai.005G078100	Gossypium raimondii	Gorai.005G078100	I	0.000
Gorai.007G045100	Gossypium raimondii	Gorai.007G045100	I	0.000
Gorai.008G075600	Gossypium raimondii	Gorai.008G075600	I	0.000
Gorai.008G100500	Gossypium raimondii	Gorai.008G100500	I	0.000
Gorai.008G210600	Gossypium raimondii	Gorai.008G210600	I	0.000
Gorai.009G255400	Gossypium raimondii	Gorai.009G255400	I	0.000
Gorai.010G131500	Gossypium raimondii	Gorai.010G131500	I	0.000
Gorai.011G114900	Gossypium raimondii	Gorai.011G114900	I	0.000
GRMZM2G016434	Zea mays	GRMZM2G016434	I	0.000
GRMZM2G076896	Zea mays	GRMZM2G076896	I	0.000
GRMZM2G100727	Zea mays	GRMZM2G100727	I	0.000
GRMZM2G149756	Zea mays	GRMZM2G149756	I	0.000
GRMZM2G457562	Zea mays	GRMZM2G457562	I	0.000
GRMZM2G544539	Zea mays	GRMZM2G544539	I	0.000
GSMUA_Achr10G09560_001	Musa acuminata	GSMUA_Achr10G09560_001	I	0.000
GSMUA_Achr10G19950_001	Musa acuminata	GSMUA_Achr10G19950_001	I	0.000
GSMUA_Achr2G17810_001	Musa acuminata	GSMUA_Achr2G17810_001	I	0.000
GSMUA_Achr6G02310_001	Musa acuminata	GSMUA_Achr6G02310_001	I	0.000
GSMUA_Achr6G18020_001	Musa acuminata	GSMUA_Achr6G18020_001	I	0.000
GSMUA_Achr6G25680_001	Musa acuminata	GSMUA_Achr6G25680_001	I	0.000
GSMUA_Achr8G08000_001	Musa acuminata	GSMUA_Achr8G08000_001	I	0.000
LjT03L06.60.nd	Lotus japonicus	LjT03L06.60.nd	I	0.000
LPERR01G33110	Leersia perrieri	LPERR01G33110	I	0.000
LPERR02G14620	Leersia perrieri	LPERR02G14620	I	0.000
LPERR05G14130	Leersia perrieri	LPERR05G14130	I	0.000
LPERR11G03740	Leersia perrieri	LPERR11G03740	I	0.000
LPERR12G03800	Leersia perrieri	LPERR12G03800	I	0.000
Lus10005805.g	Linum usitatissimum	Lus10005805.g	I	0.000
Lus10006796.g	Linum usitatissimum	Lus10006796.g	I	0.000
Lus10022426.g	Linum usitatissimum	Lus10022426.g	I	0.000
Lus10028679.g	Linum usitatissimum	Lus10028679.g	I	0.000
MDP0000186131	Malus domestica	MDP0000186131	I	0.000
MDP0000226099	Malus domestica	MDP0000226099	I	0.000
MDP0000229036	Malus domestica	MDP0000229036	I	0.000
MDP0000235028	Malus domestica	MDP0000235028	I	0.000
MDP0000242979	Malus domestica	MDP0000242979	I	0.000
MDP0000254227	Malus domestica	MDP0000254227	I	0.000
MDP0000668122	Malus domestica	MDP0000668122	I	0.000
MDP0000894895	Malus domestica	MDP0000894895	I	0.000
mgf000075m	Mimulus guttatus	mgf000075m	I	0.000
mgf019280m	Mimulus guttatus	mgf019280m	I	0.000
mgf021642m	Mimulus guttatus	mgf021642m	I	0.000
MLOC_68290	Hordeum vulgare	MLOC_68290	I	0.000
MLOC_7891	Hordeum vulgare	MLOC_7891	I	0.000
MTR_1g098460	Medicago truncatula	MTR_1g098460	I	0.000
MTR_3g098580	Medicago truncatula	MTR_3g098580	I	0.000
MTR_6g033255	Medicago truncatula	MTR_6g033255	I	0.000
MTR_6g037610	Medicago truncatula	MTR_6g037610	I	0.000
MTR_8g092460	Medicago truncatula	MTR_8g092460	I	0.000
OBART02G18470	Oryza barthii	OBART02G18470	I	0.000
OGLUM01G42800	Oryza glumaepatula	OGLUM01G42800	I	0.000
OGLUM11G04050	Oryza glumaepatula	OGLUM11G04050	I	0.000
OMERI01G35460	Oryza meridionalis	OMERI01G35460	I	0.000
ONIVA01G43260	Oryza nivara	ONIVA01G43260	I	0.000
ONIVA02G20490	Oryza nivara	ONIVA02G20490	I	0.000
ONIVA05G18720	Oryza nivara	ONIVA05G18720	I	0.000
ONIVA11G04340	Oryza nivara	ONIVA11G04340	I	0.000
OPUNC02G16450	Oryza punctata	OPUNC02G16450	I	0.000
OPUNC05G15760	Oryza punctata	OPUNC05G15760	I	0.000
OPUNC11G03940	Oryza punctata	OPUNC11G03940	I	0.000
orange1.1g005229m.g	Citrus sinensis	orange1.1g005229m.g	I	0.000
orange1.1g013225m.g	Citrus sinensis	orange1.1g013225m.g	I	0.000
orange1.1g020801m.g	Citrus sinensis	orange1.1g020801m.g	I	0.000
orange1.1g036963m.g	Citrus sinensis	orange1.1g036963m.g	I	0.000
orange1.1g039390m.g	Citrus sinensis	orange1.1g039390m.g	I	0.000
ORGLA01G0324200	Oryza glaberrima	ORGLA01G0324200	I	0.000
ORGLA05G0154400	Oryza glaberrima	ORGLA05G0154400	I	0.000
ORGLA11G0040400	Oryza glaberrima	ORGLA11G0040400	I	0.000
ORUFI01G41960	Oryza rufipogon	ORUFI01G41960	I	0.000
ORUFI02G19470	Oryza rufipogon	ORUFI02G19470	I	0.000
ORUFI05G19030	Oryza rufipogon	ORUFI05G19030	I	0.000
ORUFI11G04200	Oryza rufipogon	ORUFI11G04200	I	0.000
OS01G0868000	Oryza sativa	OS01G0868000	I	0.000
OS05G0437100	Oryza sativa	OS05G0437100	I	0.000
OS11G0168500	Oryza sativa	OS11G0168500	I	0.000
Pavir.Aa02595	Panicum virgatum	Pavir.Aa02595	I	0.000
Pavir.Cb02005	Panicum virgatum	Pavir.Cb02005	I	0.000
Pavir.Ea03713	Panicum virgatum	Pavir.Ea03713	I	0.000
Pavir.Ha01720	Panicum virgatum	Pavir.Ha01720	I	0.000
Pavir.Hb01784	Panicum virgatum	Pavir.Hb01784	I	0.000
Pavir.J02402	Panicum virgatum	Pavir.J02402	I	0.000
Pavir.J03755	Panicum virgatum	Pavir.J03755	I	0.000
Pavir.J04335	Panicum virgatum	Pavir.J04335	I	0.000
Pavir.J17038	Panicum virgatum	Pavir.J17038	I	0.000
PDK_20s1354201g001	Phoenix dactylifera	PDK_20s1354201g001	I	0.000
PGSC0003DMG400006369	Solanum tuberosum	PGSC0003DMG400006369	I	0.000
PGSC0003DMG400014240	Solanum tuberosum	PGSC0003DMG400014240	I	0.000
PGSC0003DMG400018803	Solanum tuberosum	PGSC0003DMG400018803	I	0.000
PGSC0003DMG400019693	Solanum tuberosum	PGSC0003DMG400019693	I	0.000
PGSC0003DMG400023593	Solanum tuberosum	PGSC0003DMG400023593	I	0.000
Pm022509	Prunus mume	Pm022509	I	0.000
Pm024604	Prunus mume	Pm024604	I	0.000
Pm026408	Prunus mume	Pm026408	I	0.000
Pm028829	Prunus mume	Pm028829	I	0.000
POPTR_0002s06620	Populus trichocarpa	POPTR_0002s06620	I	0.000
POPTR_0005s08940	Populus trichocarpa	POPTR_0005s08940	I	0.000
POPTR_0005s21690	Populus trichocarpa	POPTR_0005s21690	I	0.000
POPTR_0007s07090	Populus trichocarpa	POPTR_0007s07090	I	0.000
POPTR_0012s11030	Populus trichocarpa	POPTR_0012s11030	I	0.000
PRUPE_ppa006595mg	Prunus persica	PRUPE_ppa006595mg	I	0.000
PRUPE_ppa008772mg	Prunus persica	PRUPE_ppa008772mg	I	0.000
PRUPE_ppa017002mg	Prunus persica	PRUPE_ppa017002mg	I	0.000
RAP2-6	Arabidopsis thaliana	AT1G43160	D	0.000
Rap2.6L	Vitis vinifera	VIT_17s0000g00200	I	0.000
RRTF1	Vitis vinifera	VIT_03s0063g00460	I	0.000
SapurV1A.0134s0150	Salix purpurea	SapurV1A.0134s0150	I	0.000
SapurV1A.0327s0220	Salix purpurea	SapurV1A.0327s0220	I	0.000
SapurV1A.0471s0080	Salix purpurea	SapurV1A.0471s0080	I	0.000
SapurV1A.0517s0130	Salix purpurea	SapurV1A.0517s0130	I	0.000
SapurV1A.0627s0010	Salix purpurea	SapurV1A.0627s0010	I	0.000
SapurV1A.0787s0040	Salix purpurea	SapurV1A.0787s0040	I	0.000
SapurV1A.0826s0010	Salix purpurea	SapurV1A.0826s0010	I	0.000
SapurV1A.3099s0010	Salix purpurea	SapurV1A.3099s0010	I	0.000
Sb04g021160	Sorghum bicolor	Sb04g021160	I	0.000
Sb05g004170	Sorghum bicolor	Sb05g004170	I	0.000
scaffold_802838.1	Arabidopsis lyrata	scaffold_802838.1	I	0.000
Si002010m.g	Setaria italica	Si002010m.g	I	0.000
Si013986m.g	Setaria italica	Si013986m.g	I	0.000
Si018024m.g	Setaria italica	Si018024m.g	I	0.000
Si026709m.g	Setaria italica	Si026709m.g	I	0.000
Solyc03g118190.2	Solanum lycopersicum	Solyc03g118190.2	I	0.000
Solyc04g012050.2	Solanum lycopersicum	Solyc04g012050.2	I	0.000
Solyc04g051360.2	Solanum lycopersicum	Solyc04g051360.2	I	0.000
Solyc04g071770.2	Solanum lycopersicum	Solyc04g071770.2	I	0.000
Solyc12g042210.1	Solanum lycopersicum	Solyc12g042210.1	I	0.000
Solyc12g056590.1	Solanum lycopersicum	Solyc12g056590.1	I	0.000
TCM_001301	Theobroma cacao	TCM_001301	I	0.000
TCM_014762	Theobroma cacao	TCM_014762	I	0.000
TCM_017352	Theobroma cacao	TCM_017352	I	0.000
TCM_035671	Theobroma cacao	TCM_035671	I	0.000
Thhalv10004333m.g	Eutrema salsugineum	Thhalv10004333m.g	I	0.000
Thhalv10005416m.g	Eutrema salsugineum	Thhalv10005416m.g	I	0.000
Thhalv10014579m.g	Eutrema salsugineum	Thhalv10014579m.g	I	0.000
Thhalv10015583m.g	Eutrema salsugineum	Thhalv10015583m.g	I	0.000
Traes_5BL_60FC12DA6	Triticum aestivum	Traes_5BL_60FC12DA6	I	0.000
Traes_5BS_80C46D9C4	Triticum aestivum	Traes_5BS_80C46D9C4	I	0.000
VIT_07s0031g00710	Vitis vinifera	VIT_07s0031g00710	I	0.000
VIT_14s0068g01040	Vitis vinifera	VIT_14s0068g01040	I	0.000

sox9a (Tetraodon nigroviridis) Sox

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

2083 Related TFs

sox9a **(Tetraodon nigroviridis)
Sox**