NCAS_0A04790 (Naumovozyma castellii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 NCAS_0A04790 T331433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.706 0.897
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.706 0.897
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC67037 Sox 343 411
CCC67037 Sox 416 482

Links

Other Sox family TFs
Other Naumovozyma castellii TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtMYB47 Arabidopsis thaliana AT1G18710 N
AtMYB47 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001691 N
Bo2g081100 Brassica oleracea Bo2g081100 N
Bo5g025730 Brassica oleracea Bo5g025730 N
Bo6g087030 Brassica oleracea Bo6g087030 N
Bo6g118710 Brassica oleracea Bo6g118710 N
Bo6g118730 Brassica oleracea Bo6g118730 N
Bostr.7128s0480 Boechera stricta Bostr.7128s0480 N
Bostr.7128s0481 Boechera stricta Bostr.7128s0481 N
Bra003801 Brassica rapa Bra003801 N
Bra008149 Brassica rapa Bra008149 N
Bra015911 Brassica rapa Bra015911 N
Bra015912 Brassica rapa Bra015912 N
Bra016546 Brassica rapa Bra016546 N
Bra025678 Brassica rapa Bra025678 N
Cagra.4153s0008 Capsella grandiflora Cagra.4153s0008 N
Carubv10010045m.g Capsella rubella Carubv10010045m.g N
Carubv10010086m.g Capsella rubella Carubv10010086m.g N
Carubv10011014m.g Capsella rubella Carubv10011014m.g N
fgenesh1_pg.C_scaffold_1001692 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001692 N
MYB95 Arabidopsis thaliana AT1G74430 N
Thhalv10008528m.g Eutrema salsugineum Thhalv10008528m.g N
Thhalv10018987m.g Eutrema salsugineum Thhalv10018987m.g N