Carubv10010086m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10010086m.g T286299_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10010086m Myb 14 61
Carubv10010086m Myb 67 112

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.4153s0008 Capsella grandiflora Cagra.4153s0008 N 0.906
Bostr.7128s0481 Boechera stricta Bostr.7128s0481 N 0.868
fgenesh1_pg.C_scaffold_1001692 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001692 N 0.800
AtMYB47 Arabidopsis thaliana AT1G18710 N 0.779
Bo8g091100 Brassica oleracea Bo8g091100 N 0.758
AtMYB47 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001691 N 0.747
Bostr.7128s0480 Boechera stricta Bostr.7128s0480 N 0.747
Carubv10010045m.g Capsella rubella Carubv10010045m.g N 0.746
Bo5g025730 Brassica oleracea Bo5g025730 N 0.741
Bra025678 Brassica rapa Bra025678 N 0.741
Bo8g091080 Brassica oleracea Bo8g091080 N 0.730
Thhalv10008528m.g Eutrema salsugineum Thhalv10008528m.g N 0.726
Bo8g068030 Brassica oleracea Bo8g068030 N 0.722
Bo2g081100 Brassica oleracea Bo2g081100 N 0.711
Bo5g025790 Brassica oleracea Bo5g025790 N 0.708
Bra008149 Brassica rapa Bra008149 N 0.708
Bra016546 Brassica rapa Bra016546 N 0.704
Bo6g118710 Brassica oleracea Bo6g118710 N 0.690
Bra015912 Brassica rapa Bra015912 N 0.690
Bo6g118730 Brassica oleracea Bo6g118730 N 0.689
Bra015911 Brassica rapa Bra015911 N 0.689
Thhalv10018987m.g Eutrema salsugineum Thhalv10018987m.g N 0.689
Bo6g087030 Brassica oleracea Bo6g087030 N 0.680
Bra003801 Brassica rapa Bra003801 N 0.680