Cagra.4153s0008 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.4153s0008 T286140_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.4153s0008.1.p Myb 14 61
Cagra.4153s0008.1.p Myb 67 112

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10010086m.g Capsella rubella Carubv10010086m.g N 0.906
Bostr.7128s0481 Boechera stricta Bostr.7128s0481 N 0.865
fgenesh1_pg.C_scaffold_1001692 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001692 N 0.797
AtMYB47 Arabidopsis thaliana AT1G18710 N 0.776
Bo8g091100 Brassica oleracea Bo8g091100 N 0.755
AtMYB47 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001691 N 0.744
Bostr.7128s0480 Boechera stricta Bostr.7128s0480 N 0.744
Carubv10010045m.g Capsella rubella Carubv10010045m.g N 0.743
Bo5g025730 Brassica oleracea Bo5g025730 N 0.738
Bra025678 Brassica rapa Bra025678 N 0.738
Bo8g091080 Brassica oleracea Bo8g091080 N 0.730
Thhalv10008528m.g Eutrema salsugineum Thhalv10008528m.g N 0.723
Bo8g068030 Brassica oleracea Bo8g068030 N 0.719
Bo2g081100 Brassica oleracea Bo2g081100 N 0.708
Bo5g025790 Brassica oleracea Bo5g025790 N 0.705
Bra008149 Brassica rapa Bra008149 N 0.705
Bra016546 Brassica rapa Bra016546 N 0.701
Bo6g118710 Brassica oleracea Bo6g118710 N 0.687
Bra015912 Brassica rapa Bra015912 N 0.687
Bo6g118730 Brassica oleracea Bo6g118730 N 0.686
Bra015911 Brassica rapa Bra015911 N 0.686
Thhalv10018987m.g Eutrema salsugineum Thhalv10018987m.g N 0.686
Bo6g087030 Brassica oleracea Bo6g087030 N 0.677
Bra003801 Brassica rapa Bra003801 N 0.677