cassava14282.m1 (Manihot esculenta)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 cassava14282.m1 T333920_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14282.m1 Sox 294 334

Links

Other Sox family TFs
Other Manihot esculenta TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB21580 Xenopus laevis AAB21580 I
AAB22139 Xenopus laevis AAB22139 I
AAEL014322 Aedes aegypti AAEL014322 I
AAL11024 Xenopus tropicalis AAL11024 I
AALB008334 Anopheles albimanus AALB008334 I
Aan_R003723 Calypte anna Aan_R003723 I
Aan_R006542 Calypte anna Aan_R006542 I
AARA002094 Anopheles arabiensis AARA002094 I
AATE018889 Anopheles atroparvus AATE018889 I
ACHR010174 Anopheles christyi ACHR010174 I
ACOM034431 Anopheles coluzzii ACOM034431 I
ACUA006973 Anopheles culicifacies ACUA006973 I
ADAC002492 Anopheles darlingi ADAC002492 I
ADIR010448 Anopheles dirus ADIR010448 I
AEPI006062 Anopheles epiroticus AEPI006062 I
AFAF001067 Anopheles farauti AFAF001067 I
Afo_R014556 Aptenodytes forsteri Afo_R014556 I
AFUN011634 Anopheles funestus AFUN011634 I
Alligator_sinensis_CCG013129.1 Alligator sinensis Alligator_sinensis_CCG013129.1 I
Alligator_sinensis_CCG017419.1 Alligator sinensis Alligator_sinensis_CCG017419.1 I
Alligator_sinensis_CCG018754.1 Alligator sinensis Alligator_sinensis_CCG018754.1 I
AMAM006832 Anopheles maculatus AMAM006832 I
AMEM001613 Anopheles merus AMEM001613 I
AMIN003460 Anopheles minimus AMIN003460 I
AQUA000514 Anopheles quadriannulatus AQUA000514 I
ASTEI05690 Anopheles stephensi ASTEI05690 I
Brh_R000054 Buceros rhinoceros Brh_R000054 I
Brh_R006718 Buceros rhinoceros Brh_R006718 I
CPIJ005345 Culex quinquefasciatus CPIJ005345 I
CpipJ_CPIJ005345 Culex pipiens CpipJ_CPIJ005345 I
ENSAMEG00000012326 Ailuropoda melanoleuca ENSAMEG00000012326 I
ENSAMEG00000013193 Ailuropoda melanoleuca ENSAMEG00000013193 I
ENSAMEG00000018197 Ailuropoda melanoleuca ENSAMEG00000018197 I
ENSAMXG00000000428 Astyanax mexicanus ENSAMXG00000000428 I
ENSAMXG00000007437 Astyanax mexicanus ENSAMXG00000007437 I
ENSAMXG00000017040 Astyanax mexicanus ENSAMXG00000017040 I
ENSAPLG00000001124 Anas platyrhynchos ENSAPLG00000001124 I
ENSAPLG00000005673 Anas platyrhynchos ENSAPLG00000005673 I
ENSBTAP00000002868-D1 Bos grunniens ENSBTAP00000002868-D1 I
ENSBTAP00000007923-D1 Bos grunniens ENSBTAP00000007923-D1 I
ENSCSAG00000003889 Chlorocebus sabaeus ENSCSAG00000003889 I
ENSCSAG00000004934 Chlorocebus sabaeus ENSCSAG00000004934 I
ENSCSAG00000014291 Chlorocebus sabaeus ENSCSAG00000014291 I
ENSFALG00000000758 Ficedula albicollis ENSFALG00000000758 I
ENSFALG00000002471 Ficedula albicollis ENSFALG00000002471 I
ENSFALG00000010507 Ficedula albicollis ENSFALG00000010507 I
ENSGMOG00000011389 Gadus morhua ENSGMOG00000011389 I
ENSGMOG00000016963 Gadus morhua ENSGMOG00000016963 I
ENSLACG00000014430 Latimeria chalumnae ENSLACG00000014430 I
ENSLACG00000014874 Latimeria chalumnae ENSLACG00000014874 I
ENSLOCG00000002164 Lepisosteus oculatus ENSLOCG00000002164 I
ENSLOCG00000010722 Lepisosteus oculatus ENSLOCG00000010722 I
ENSMEUG00000010628 Macropus eugenii ENSMEUG00000010628 I
ENSMEUG00000014270 Macropus eugenii ENSMEUG00000014270 I
ENSMEUG00000015462 Macropus eugenii ENSMEUG00000015462 I
ENSMGAG00000007210 Meleagris gallopavo ENSMGAG00000007210 I
ENSMGAG00000011091 Meleagris gallopavo ENSMGAG00000011091 I
ENSMICG00000011211 Microcebus murinus ENSMICG00000011211 I
ENSMMUG00000000064 Macaca mulatta ENSMMUG00000000064 I
ENSMPUG00000004935 Mustela putorius furo ENSMPUG00000004935 I
ENSMPUG00000011508 Mustela putorius furo ENSMPUG00000011508 I
ENSMPUG00000013563 Mustela putorius furo ENSMPUG00000013563 I
ENSNLEG00000005207 Nomascus leucogenys ENSNLEG00000005207 I
ENSNLEG00000018108 Nomascus leucogenys ENSNLEG00000018108 I
ENSOARG00000015159 Ovis aries ENSOARG00000015159 I
ENSOARG00000025174 Ovis aries ENSOARG00000025174 I
ENSONIG00000000077 Oreochromis niloticus ENSONIG00000000077 I
ENSONIG00000007897 Oreochromis niloticus ENSONIG00000007897 I
ENSONIG00000010796 Oreochromis niloticus ENSONIG00000010796 I
ENSONIG00000019313 Oreochromis niloticus ENSONIG00000019313 I
ENSP00000228644 Macaca fascicularis ENSP00000228644 I
ENSP00000241651 Macaca fascicularis ENSP00000241651 I
ENSPANG00000011946 Papio anubis ENSPANG00000011946 I
ENSPANG00000016865 Papio anubis ENSPANG00000016865 I
ENSPANG00000020394 Papio anubis ENSPANG00000020394 I
ENSPFOG00000009843 Poecilia formosa ENSPFOG00000009843 I
ENSPFOG00000013532 Poecilia formosa ENSPFOG00000013532 I
ENSPFOG00000017279 Poecilia formosa ENSPFOG00000017279 I
ENSPFOG00000017488 Poecilia formosa ENSPFOG00000017488 I
ENSPPYG00000000338 Pongo abelii ENSPPYG00000000338 I
ENSPPYG00000003449 Pongo abelii ENSPPYG00000003449 I
ENSPPYG00000004800 Pongo abelii ENSPPYG00000004800 I
ENSPSIG00000012000 Pelodiscus sinensis ENSPSIG00000012000 I
ENSSARG00000002401 Sorex araneus ENSSARG00000002401 I
ENSSHAG00000013391 Sarcophilus harrisii ENSSHAG00000013391 I
ENSSHAG00000016307 Sarcophilus harrisii ENSSHAG00000016307 I
ENSSHAG00000017220 Sarcophilus harrisii ENSSHAG00000017220 I
ENSSSCG00000015475 Sus scrofa ENSSSCG00000015475 I
ENSSTOG00000011556 Ictidomys tridecemlineatus ENSSTOG00000011556 I
ENSSTOG00000015810 Ictidomys tridecemlineatus ENSSTOG00000015810 I
ENSSTOG00000028049 Ictidomys tridecemlineatus ENSSTOG00000028049 I
ENSTGUG00000007755 Taeniopygia guttata ENSTGUG00000007755 I
ENSTSYG00000003282 Tarsius syrichta ENSTSYG00000003282 I
ENSTSYG00000009118 Tarsius syrichta ENSTSYG00000009118 I
ENSXMAG00000003931 Xiphophorus maculatus ENSXMAG00000003931 I
ENSXMAG00000007430 Xiphophorus maculatus ENSXMAG00000007430 I
ENSXMAG00000009780 Xiphophorus maculatus ENSXMAG00000009780 I
ENSXMAG00000017496 Xiphophorus maculatus ENSXMAG00000017496 I
GA10192 Drosophila pseudoobscura FBgn0070251 I
GD18361 Drosophila simulans FBgn0189889 I
GE23932 Drosophila yakuba FBgn0241076 I
GF18746 Drosophila ananassae FBgn0095763 I
Gfo_R007711 Geospiza fortis Gfo_R007711 I
Gfo_R009107 Geospiza fortis Gfo_R009107 I
GG12413 Drosophila erecta FBgn0104701 I
GH13904 Drosophila grimshawi FBgn0121380 I
GI24830 Drosophila mojavensis FBgn0147551 I
GJ24474 Drosophila virilis FBgn0211554 I
GK22777 Drosophila willistoni FBgn0224749 I
GL13832 Drosophila persimilis FBgn0151437 I
GM23547 Drosophila sechellia FBgn0178413 I
LCUP007809 Lucilia cuprina LCUP007809 I
MYF5 Anolis carolinensis ENSACAG00000014431 I
MYF5 Bos taurus ENSBTAG00000026972 I
MYF5 Canis familiaris ENSCAFG00000005808 I
MYF5 Choloepus hoffmanni ENSCHOG00000008319 I
MYF5 Callithrix jacchus ENSCJAG00000019340 I
MYF5 Cavia porcellus ENSCPOG00000007766 I
myf5 Danio rerio ENSDARG00000007277 I
MYF5 Dasypus novemcinctus ENSDNOG00000034747 I
Myf5 Dipodomys ordii ENSDORG00000015437 I
MYF5 Equus caballus ENSECAG00000020047 I
MYF5 Erinaceus europaeus ENSEEUG00000011612 I
MYF5 Echinops telfairi ENSETEG00000011255 I
MYF5 Felis catus ENSFCAG00000015011 I
MYF5 Homo sapiens ENSG00000111049 D
MYF5 Gallus gallus ENSGALG00000028091 I
MYF5 Gorilla gorilla ENSGGOG00000004366 I
MYF5 Loxodonta africana ENSLAFG00000016473 I
MYF5 Myotis lucifugus ENSMLUG00000004943 I
MYF5 Macaca mulatta ENSMMUG00000011669 I
MYF5 Monodelphis domestica ENSMODG00000020478 I
Myf5 Mus musculus ENSMUSG00000000435 D
MYF5 Ornithorhynchus anatinus ENSOANG00000004853 I
MYF5 Oryctolagus cuniculus ENSOCUG00000025477 I
MYF5 Otolemur garnettii ENSOGAG00000001039 I
MYF5 Ochotona princeps ENSOPRG00000009007 I
myf5 Oryzias latipes ENSORLG00000016257 I
MYF5 Procavia capensis ENSPCAG00000001722 I
MYF5 Pan troglodytes ENSPTRG00000005261 I
MYF5 Pteropus vampyrus ENSPVAG00000003336 I
Myf5 Rattus norvegicus ENSRNOG00000004768 I
MYF5 Sorex araneus ENSSARG00000008217 I
MYF5 Sus scrofa ENSSSCG00000000937 I
MYF5 Tupaia belangeri ENSTBEG00000008363 I
MYF5 Tursiops truncatus ENSTTRG00000014691 I
MYF5 Vicugna pacos ENSVPAG00000001927 I
myf5 Xenopus tropicalis XB-GENE-493550 I
myf5.L Xenopus laevis XB-GENE-866267 I
MYF6 Ochotona princeps ENSOPRG00000008999 I
MYOD1 Anolis carolinensis ENSACAG00000000054 I
MYOD1 Canis familiaris ENSCAFG00000009066 I
MYOD1 Callithrix jacchus ENSCJAG00000009258 I
MYOD1 Cavia porcellus ENSCPOG00000021351 I
myod1 Danio rerio ENSDARG00000030110 I
MYOD1 Dasypus novemcinctus ENSDNOG00000017164 I
MYOD1 Equus caballus ENSECAG00000002132 I
MYOD1 Echinops telfairi ENSETEG00000003979 I
MYOD1 Felis catus ENSFCAG00000004973 I
MYOD1 Homo sapiens ENSG00000129152 D
myod1 Gasterosteus aculeatus ENSGACG00000008444 I
myod1 Gasterosteus aculeatus ENSGACG00000017350 I
MYOD1 Gallus gallus ENSGALG00000006216 I
MYOD1 Gorilla gorilla ENSGGOG00000008222 I
MYOD1 Loxodonta africana ENSLAFG00000018353 I
MYOD1 Microcebus murinus ENSMICG00000005566 I
MYOD1 Myotis lucifugus ENSMLUG00000007940 I
MYOD1 Macaca mulatta ENSMMUG00000006400 I
MYOD1 Monodelphis domestica ENSMODG00000006749 I
Myod1 Mus musculus ENSMUSG00000009471 D
MYOD1 Otolemur garnettii ENSOGAG00000029784 I
MYOD1 Ochotona princeps ENSOPRG00000002390 I
myod1 Oryzias latipes ENSORLG00000000694 I
MYOD1 Procavia capensis ENSPCAG00000001317 I
MYOD1 Pan troglodytes ENSPTRG00000003406 I
MYOD1 Pteropus vampyrus ENSPVAG00000012829 I
Myod1 Rattus norvegicus ENSRNOG00000011306 I
MYOD1 Sus scrofa ENSSSCG00000013375 I
MYOD1 Tupaia belangeri ENSTBEG00000003438 I
MYOD1 Taeniopygia guttata ENSTGUG00000008814 I
myod1 Tetraodon nigroviridis ENSTNIG00000002808 I
myod1 Tetraodon nigroviridis ENSTNIG00000018793 I
myod1 Takifugu rubripes ENSTRUG00000016609 I
MYOD1 Tursiops truncatus ENSTTRG00000013869 I
myod1 Xenopus tropicalis XB-GENE-1017498 I
myod1.S Xenopus laevis XB-GENE-1017506 I
myod2 Takifugu rubripes ENSTRUG00000014891 I
MYOG Anolis carolinensis ENSACAG00000004818 I
MYOG Bos taurus ENSBTAG00000006030 I
MYOG Canis familiaris ENSCAFG00000010309 I
MYOG Callithrix jacchus ENSCJAG00000006443 I
MYOG Cavia porcellus ENSCPOG00000023459 I
myog Danio rerio ENSDARG00000009438 I
MYOG Dasypus novemcinctus ENSDNOG00000032549 I
MYOG Equus caballus ENSECAG00000015955 I
MYOG Erinaceus europaeus ENSEEUG00000011702 I
MYOG Echinops telfairi ENSETEG00000003043 I
MYOG Felis catus ENSFCAG00000013108 I
MYOG Homo sapiens ENSG00000122180 D
myog Gasterosteus aculeatus ENSGACG00000000349 I
MYOG Gallus gallus ENSGALG00000000172 I
MYOG Gorilla gorilla ENSGGOG00000002115 I
MYOG Loxodonta africana ENSLAFG00000013113 I
MYOG Meleagris gallopavo ENSMGAG00000002212 I
MYOG Myotis lucifugus ENSMLUG00000016127 I
MYOG Monodelphis domestica ENSMODG00000001009 I
Myog Mus musculus ENSMUSG00000026459 D
MYOG Ornithorhynchus anatinus ENSOANG00000002107 I
MYOG Oryctolagus cuniculus ENSOCUG00000011548 I
MYOG Otolemur garnettii ENSOGAG00000029573 I
MYOG Ochotona princeps ENSOPRG00000014753 I
myog Oryzias latipes ENSORLG00000015906 I
MYOG Procavia capensis ENSPCAG00000006860 I
MYOG Pan troglodytes ENSPTRG00000001866 I
Myog Rattus norvegicus ENSRNOG00000030743 I
MYOG Tupaia belangeri ENSTBEG00000017364 I
MYOG Taeniopygia guttata ENSTGUG00000001380 I
myog Tetraodon nigroviridis ENSTNIG00000007278 I
myog Takifugu rubripes ENSTRUG00000001200 I
MYOG Tursiops truncatus ENSTTRG00000000710 I
MYOG Vicugna pacos ENSVPAG00000010566 I
myog Xenopus tropicalis XB-GENE-490105 I
myog.L Xenopus laevis XB-GENE-6252382 I
myog.S Xenopus laevis XB-GENE-865934 I
Myotis_brandtii_MYF5_10034131 Myotis brandtii Myotis_brandtii_MYF5_10034131 I
nau Drosophila melanogaster FBgn0002922 D
Ogr08795 Ophisaurus gracilis Ogr08795 I
Ogr16343 Ophisaurus gracilis Ogr16343 I
PHUM424120 Pediculus humanus PHUM424120 I
Pvit_01710 Pogona vitticeps Pvit_01710 I
Pvit_15256 Pogona vitticeps Pvit_15256 I
Sjc_0011830 Schistosoma japonicum Sjc_0011830 I