cassava14282.m1 (Manihot esculenta)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 cassava14282.m1 T333920_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14282.m1 Sox 294 334

Links

Other Sox family TFs
Other Manihot esculenta TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5DL_BCFE39D13 Triticum aestivum Traes_5DL_BCFE39D13 N 0.506
CGOC_0001370301 Cylicostephanus goldi CGOC_0001370301 N 0.471
F775_24487 Aegilops tauschii F775_24487 N 0.462
SBAD_0001127201 Soboliphyme baturini SBAD_0001127201 N 0.457
TVAG_468590 Trichomonas vaginalis TVAG_468590 N 0.450
SMU15030327 Schmidtea mediterranea SMU15030327 N 0.437
TRAES3BF116200180CFD_g Triticum aestivum TRAES3BF116200180CFD_g N 0.433
HMG20A Homo sapiens ENSG00000140382 I 0.429
OLONG_013579 Oryza longistaminata OLONG_013579 N 0.428
DAPPUDRAFT_336128 Daphnia pulex DAPPUDRAFT_336128 N 0.421
GPLIN_001054700 Globodera pallida GPLIN_001054700 N 0.418