CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BXY_1714600
(
Bursaphelenchus xylophilus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
BXY_1714600
T336109_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_1714600.1
Sox
2
58
CYEEHKKKFPDESVQVTEISKRCSEKWKTMKEEEKKRFYELAQKDAERYQAEVQAYG
BXY_1714600.1
Sox
76
144
PKKALSAFFFFSNEKRPQVQAEHPEWKVGQIAQELGKYWKNLTEEERQVYERKAADDKARYDEEMRSYR
Links
Other
Sox
family TFs
Other
Bursaphelenchus xylophilus
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo6g077880
Brassica oleracea
Bo6g077880
I
Bra003462
Brassica rapa
Bra003462
I
BRADI1G04110
Brachypodium distachyon
BRADI1G04110
N
Cla000729
Citrullus lanatus
Cla000729
I
GSMUA_Achr1G23090_001
Musa acuminata
GSMUA_Achr1G23090_001
N
GSMUA_Achr5G26850_001
Musa acuminata
GSMUA_Achr5G26850_001
I