HNAJ_0001324301 (Hymenolepis nana)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 HNAJ_0001324301 T336458_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tcf7l1
M00207_2.00
Mus musculus
NNNNWWDN

NHWWNNNN
PBM
Badis et al.(2009)
Tcf3_3787
0.668 0.826
TCF7L1
M03512_2.00
Homo sapiens
AAAGATCAAAGG

CCTTTGATCTTT
SELEX
Jolma et al.(2013)
TCF7L1_1
0.668 0.826
TCF7L1
M05779_2.00
Homo sapiens
RSATCAAAG

CTTTGATSY
SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_1
0.668 0.826
TCF7L1
M05780_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_2
0.668 0.826
TCF7L1
M09395_2.00
Homo sapiens
NBBCTTTGAWSTB

VASWTCAAAGVVN
Misc
Kulakovskiy et al.(2013)
TF7L1_HUMAN.H11MO.0.B
0.668 0.826
Tcf7l1
M09406_2.00
Mus musculus
BBCTTTGAWST

ASWTCAAAGVV
Misc
Kulakovskiy et al.(2013)
TF7L1_MOUSE.H11MO.0.A
0.668 0.826
Tcf7l1
M09407_2.00
Mus musculus
NDGCAGSTGBB

VVCASCTGCHN
Misc
Kulakovskiy et al.(2013)
TFE2_MOUSE.H11MO.0.A
0.668 0.826
TCF7L1
M11320_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_01
0.668 0.826
TCF7L1
M11321_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_Q6_01
0.668 0.826
TCF7L1
M11322_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF3_Q6
0.668 0.826
TCF7L1
M05781_2.00
Homo sapiens
CTTTGATSY

RSATCAAAG
SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_1
0.668 0.826
TCF7L1
M05782_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_2
0.668 0.826
Tcf7l2
M00198_2.00
Mus musculus
NSWTCAAAVN

NBTTTGAWSN
PBM
Badis et al.(2009)
Tcf7l2_3461
0.667 0.826
Tcf7l2
M02646_2.00
Mus musculus
SATCAAAGN

NCTTTGATS
SELEX
Hallikas et al.(2006)
Tcf4
0.667 0.826
TCF7L2
M08167_2.00
Homo sapiens
NVASWTCAAAGVVN

NBBCTTTGAWSTBN
ChIP-seq
Mathelier et al.(2014)
MA0523.1
0.667 0.826
TCF7L2
M09393_2.00
Homo sapiens
DGCAGSTGKS

SMCASCTGCH
Misc
Kulakovskiy et al.(2013)
ITF2_HUMAN.H11MO.0.C
0.667 0.826
TCF7L2
M09394_2.00
Homo sapiens
VVASWTCAAAGVV

BBCTTTGAWSTBB
Misc
Kulakovskiy et al.(2013)
TF7L2_HUMAN.H11MO.0.A
0.667 0.826
Tcf7l2
M09401_2.00
Mus musculus
VVASWTCAAAGVV

BBCTTTGAWSTBB
Misc
Kulakovskiy et al.(2013)
TF7L2_MOUSE.H11MO.0.A
0.667 0.826
TCF7L2
M09638_2.00
Homo sapiens
CCTTTGAWST

ASWTCAAAGG
Misc
Heinz et al.(2010)
K562-TCF7L2_GSE29196
0.667 0.826
TCF7L2
M11316_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5_01
0.667 0.826
TCF7L2
M11317_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5_02
0.667 0.826
TCF7L2
M11318_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF4_Q5
0.667 0.826
TCF7L2
M11319_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF7L2_06
0.667 0.826
Lef1
M00200_2.00
Mus musculus
NSWTCAAAVN

NBTTTGAWSN
PBM
Badis et al.(2009)
Lef1_3504
0.667 0.812
LEF1
M03511_2.00
Homo sapiens
NRAGATCAAAGRVWW

WWBYCTTTGATCTYN
SELEX
Jolma et al.(2013)
LEF1_1
0.667 0.812
LEF1
M05771_2.00
Homo sapiens
NSATCAAAS

STTTGATSN
SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_1
0.667 0.812
LEF1
M05772_2.00
Homo sapiens
WCATCGRGRCGCTGW

WCAGCGYCYCGATGW
SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_2
0.667 0.812
LEF1
M05775_2.00
Homo sapiens
ASATCAAAG

CTTTGATST
SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_1
0.667 0.812
LEF1
M05776_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_2
0.667 0.812
LEF1
M05895_2.00
Homo sapiens
WTCAAAGNNN

NNNCTTTGAW
SMiLE-seq
Isakova et al.(2017)
LEF1
0.667 0.812
LEF1
M09392_2.00
Homo sapiens
BSYTTTSWNNTBYH

DRVANNWSAAARSV
Misc
Kulakovskiy et al.(2013)
LEF1_HUMAN.H11MO.0.A
0.667 0.812
Lef1
M09402_2.00
Mus musculus
BSYTTTSWNNTBYH

DRVANNWSAAARSV
Misc
Kulakovskiy et al.(2013)
LEF1_MOUSE.H11MO.0.B
0.667 0.812
LEF1
M11311_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q2_01
0.667 0.812
LEF1
M11312_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q3
0.667 0.812
LEF1
M11313_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q4
0.667 0.812
LEF1
M11314_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q5_01
0.667 0.812
LEF1
M11315_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LEF1_Q5
0.667 0.812
LEF1
M05773_2.00
Homo sapiens
ASATCAAAG

CTTTGATST
SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_1
0.667 0.812
LEF1
M05774_2.00
Homo sapiens
WCATCGRGGCGCTGW

WCAGCGCCYCGATGW
SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_2
0.667 0.812
LEF1
M05777_2.00
Homo sapiens
ASATCAAAG

CTTTGATST
SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_1
0.667 0.812
LEF1
M05778_2.00
Homo sapiens
ACATCGRGRCGCTGW

WCAGCGYCYCGATGT
SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_2
0.667 0.812
pan
M06451_2.00
Drosophila melanogaster
DWYCAAAD

HTTTGRWH
B1H
Zhu et al.(2011)
pan_FlyReg_FBgn0085432
0.667 0.783
pan
M08428_2.00
Drosophila melanogaster
WHNAAAVRNRSCGM

KCGSYNYBTTTNDW
ChIP-chip
Mathelier et al.(2014)
MA0237.2
0.667 0.783
pan
M11337_2.00
Drosophila melanogaster
AAGATCAAAGG

CCTTTGATCTT
Transfac
Matys et al.(2006)
I$TCF_1
0.667 0.783
pan
M11338_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TCF_Q6
0.667 0.783
Tcf7
M00193_2.00
Mus musculus
HNHNNNNNN

NNNNNNDND
PBM
Badis et al.(2009)
Tcf7_0950
0.642 0.812
Tcf7
M03532_2.00
Mus musculus
AAASATCAAAGV

BCTTTGATSTTT
SELEX
Jolma et al.(2013)
Tcf7_1
0.642 0.812
TCF7
M05755_2.00
Homo sapiens
DSATCAAWS

SWTTGATSH
SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_1
0.642 0.812
TCF7
M05756_2.00
Homo sapiens
WCWKCGYCYCGWTGW

WCAWCGRGRCGMWGW
SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_2
0.642 0.812
TCF7
M05890_2.00
Homo sapiens
NNASATCAAASNN

NNSTTTGATSTNN
SMiLE-seq
Isakova et al.(2017)
TCF7
0.642 0.812
TCF7
M09386_2.00
Homo sapiens
NBBCTTTSAWSTBNBN

NVNVASWTSAAAGVVN
Misc
Kulakovskiy et al.(2013)
TCF7_HUMAN.H11MO.0.A
0.642 0.812
Tcf7
M09400_2.00
Mus musculus
VVRVADSAAARVVVNV

BNBBBYTTTSHTBYBB
Misc
Kulakovskiy et al.(2013)
TCF7_MOUSE.H11MO.0.A
0.642 0.812
TCF7
M11294_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF1_Q5_01
0.642 0.812
TCF7
M11295_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF1_Q5
0.642 0.812
TCF7
M05757_2.00
Homo sapiens
RSATCAAAS

STTTGATSY
SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_1
0.642 0.812
TCF7
M05758_2.00
Homo sapiens
WCAWCGRGRCGMWGW

WCWKCGYCYCGWTGW
SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_2
0.642 0.812
pop-1
M00712_2.00
Caenorhabditis elegans
NNHDWVNNNN

NNNNBWHDNN
PBM
Narasimhan et al.(2015)
pTH9135
0.567 0.580
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HNAJ_0001324301-mRNA-1 Sox 266 334

Links

Other Sox family TFs
Other Hymenolepis nana TFs

502 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BATDEDRAFT_27558 Batrachochytrium dendrobatidis BATDEDRAFT_27558 I 0.000
CAD26261 Encephalitozoon cuniculi CAD26261 D 0.000
CC1G_01962 Coprinopsis cinerea CC1G_01962 I 0.000
CERSUDRAFT_94820 Ceriporiopsis subvermispora CERSUDRAFT_94820 I 0.000
CNJ00280 Cryptococcus neoformans CNJ00280 I 0.000
CY34DRAFT_106181 Suillus luteus CY34DRAFT_106181 I 0.000
DI09_11p240 Microsporidia sp DI09_11p240 N 0.000
E5Q_03771 Mixia osmundae E5Q_03771 I 0.000
EDEG_01594 Edhazardia aedis EDEG_01594 I 0.000
EHEL_031090 Encephalitozoon hellem EHEL_031090 I 0.000
Eint_031070 Encephalitozoon intestinalis Eint_031070 I 0.000
EROM_031050 Encephalitozoon romaleae EROM_031050 I 0.000
estExt_fgenesh1_pg.C_10219 Sporobolomyces roseus estExt_fgenesh1_pg.C_10219 I 0.000
estExt_fgenesh1_pg.C_20336 Sporobolomyces roseus estExt_fgenesh1_pg.C_20336 I 0.000
e_gw1.10.235.1 Phycomyces blakesleeanus e_gw1.10.235.1 I 0.000
fgenesh1_pg.C_scaffold_15000074 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_15000074 I 0.000
fgenesh1_pg.C_scaffold_6000346 Sporobolomyces roseus fgenesh1_pg.C_scaffold_6000346 N 0.000
fgeneshMC_pg.1_#_1279 Mucor circinelloides fgeneshMC_pg.1_#_1279 N 0.000
fgeneshMC_pg.2_#_8 Mucor circinelloides fgeneshMC_pg.2_#_8 I 0.000
fgeneshMC_pg.7_#_205 Mucor circinelloides fgeneshMC_pg.7_#_205 N 0.000
fgeneshMC_pg.7_#_41 Mucor circinelloides fgeneshMC_pg.7_#_41 I 0.000
fgeneshPB_pg.11__229 Phycomyces blakesleeanus fgeneshPB_pg.11__229 N 0.000
GALMADRAFT_211191 Galerina marginata GALMADRAFT_211191 I 0.000
GLOINDRAFT_235135 Rhizophagus irregularis GLOINDRAFT_235135 N 0.000
GLOINDRAFT_43985 Rhizophagus irregularis GLOINDRAFT_43985 I 0.000
GLOTRDRAFT_92391 Gloeophyllum trabeum GLOTRDRAFT_92391 I 0.000
H311_05138 Anncaliia algerae H311_05138 I 0.000
JAAARDRAFT_47621 Jaapia argillacea JAAARDRAFT_47621 I 0.000
K443DRAFT_127593 Laccaria amethystina K443DRAFT_127593 I 0.000
L804_00025 Cryptococcus gattii L804_00025 I 0.000
LACBIDRAFT_293988 Laccaria bicolor LACBIDRAFT_293988 I 0.000
M378DRAFT_8263 Amanita muscaria M378DRAFT_8263 I 0.000
M407DRAFT_11655 Tulasnella calospora M407DRAFT_11655 I 0.000
M407DRAFT_4599 Tulasnella calospora M407DRAFT_4599 I 0.000
M408DRAFT_258951 Serendipita vermifera M408DRAFT_258951 I 0.000
M413DRAFT_413744 Hebeloma cylindrosporum M413DRAFT_413744 I 0.000
M896_030550 Ordospora colligata M896_030550 I 0.000
MELLADRAFT_35504 Melampsora laricipopulina MELLADRAFT_35504 I 0.000
Moror_6758 Moniliophthora roreri Moror_6758 I 0.000
MVLG_02963 Microbotryum violaceum MVLG_02963 I 0.000
MVLG_02993 Microbotryum violaceum MVLG_02993 I 0.000
NAPIS_ORF00184 Nosema apis NAPIS_ORF00184 I 0.000
NBO_11g0012 Nosema bombycis NBO_11g0012 I 0.000
NBO_85g0005 Nosema bombycis NBO_85g0005 I 0.000
NCER_100211 Nosema ceranae NCER_100211 I 0.000
NEPG_01845 Nematocida parisii ertm1 NEPG_01845 I 0.000
NERG_00880 Nematocida sp NERG_00880 I 0.000
PAN0_021c6005 Pseudozyma antarctica PAN0_021c6005 N 0.000
PAXRUDRAFT_10369 Paxillus rubicundulus PAXRUDRAFT_10369 I 0.000
PFL1_03213 Pseudozyma flocculosa PFL1_03213 I 0.000
PHACADRAFT_182311 Phanerochaete carnosa PHACADRAFT_182311 N 0.000
PHACADRAFT_257545 Phanerochaete carnosa PHACADRAFT_257545 I 0.000
PHLGIDRAFT_55548 Phlebiopsis gigantea PHLGIDRAFT_55548 I 0.000
PHSY_002545 Pseudozyma hubeiensis PHSY_002545 N 0.000
PIIN_02203 Piriformospora indica PIIN_02203 I 0.000
PLEOSDRAFT_173849 Pleurotus ostreatus PLEOSDRAFT_173849 I 0.000
POSPLDRAFT_98870 Postia placenta POSPLDRAFT_98870 I 0.000
PSEUBRA_SCAF22g00024 Pseudozyma brasiliensis PSEUBRA_SCAF22g00024 N 0.000
PTTG_03012 Puccinia triticina PTTG_03012 I 0.000
RHTO_03185 Rhodosporidium toruloides RHTO_03185 I 0.000
RHTO_06229 Rhodosporidium toruloides RHTO_06229 I 0.000
RO3G_11930 Rhizopus oryzae RO3G_11930 I 0.000
RO3G_13360 Rhizopus oryzae RO3G_13360 I 0.000
RO3G_16164 Rhizopus oryzae RO3G_16164 N 0.000
RTG_01934 Rhodotorula glutinis RTG_01934 I 0.000
SCHCODRAFT_257987 Schizophyllum commune SCHCODRAFT_257987 I 0.000
SERLA73DRAFT_72643 Serpula lacrymans SERLA73DRAFT_72643 I 0.000
SPPG_01974 Spizellomyces punctatus SPPG_01974 N 0.000
SPPG_05249 Spizellomyces punctatus SPPG_05249 I 0.000
SPPG_07013 Spizellomyces punctatus SPPG_07013 N 0.000
sr13171 Sporisorium reilianum sr13171 N 0.000
THOM_0497 Trachipleistophora hominis THOM_0497 I 0.000
UHOR_03270 Ustilago hordei UHOR_03270 N 0.000
UM06283 Ustilago maydis UM06283 N 0.000
V565_070630 Rhizoctonia solani V565_070630 I 0.000
VCUG_00708 Vavraia culicis VCUG_00708 I 0.000
VSX2 Sus scrofa ENSSSCG00000002363 I 0.000