stat1a (Tetraodon nigroviridis)
STAT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02864 (STAT_bind) IPR013801 ENSTNIG00000017161 T337703_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STAT1
M08171_2.00 		Homo sapiens
HTTCCYRGAAV
BTTCYRGGAAD		 ChIP-seq
Mathelier et al.(2014)
MA0137.3 		0.701 0.701
STAT1
M08013_2.00 		Homo sapiens
NBBNBTTCCHRGAADNSHNNN
NNNDSNHTTCYDGGAAVNVVN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_STAT1_Stanford 		0.701 0.701
STAT1
M08014_2.00 		Homo sapiens
YTTCCYRGAAR
YTTCYRGGAAR		 ChIP-seq
Gerstein et al.(2012)
K562_STAT1_Stanford 		0.701 0.701
STAT1
M08229_2.00 		Homo sapiens
NTTCYNRGAA
TTCYNRGAAN		 ChIP-seq
Contrino et al.(2012)
Mv124 		0.701 0.701
STAT1
M08230_2.00 		Homo sapiens
RGTTTCRBTT
AAVYGAAACY		 ChIP-seq
Contrino et al.(2012)
Mv125 		0.701 0.701
STAT1
M09411_2.00 		Homo sapiens
HBHNYTTCCNRGAARHSHN
NDSDYTTCYNGGAARNDVD		 Misc
Kulakovskiy et al.(2013)
STAT1_HUMAN.H11MO.0.A 		0.701 0.701
STAT1
M09642_2.00 		Homo sapiens
NHTTCYNRGAADNN
NNHTTCYNRGAADN		 Misc
Heinz et al.(2010)
HelaS3-STAT1_GSE12782 		0.701 0.701
STAT1
M11348_2.00 		Homo sapiens
NSNYAHTTCCSGGAADBBNHV
BDNVVHTTCCSGGAADTRNSN		 Transfac
Matys et al.(2006)
V$STAT1_01 		0.701 0.701
STAT1
M11349_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_02 		0.701 0.701
STAT1
M11350_2.00 		Homo sapiens
VNHTTMBN
NVKAADNB		 Transfac
Matys et al.(2006)
V$STAT1_03 		0.701 0.701
STAT1
M11351_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_05 		0.701 0.701
STAT1
M11352_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_07 		0.701 0.701
STAT1
M11353_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_Q4 		0.701 0.701
STAT1
M11354_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAT1_Q6 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000001654 STAT 315 564
ENSTNIP00000002227 STAT 315 564
ENSTNIP00000020297 STAT 315 564

Links

Other STAT family TFs
Other Tetraodon nigroviridis TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27529.m000047 Ricinus communis 27529.m000047 N 0.000
chr4.CM0288.500.nc Lotus japonicus chr4.CM0288.500.nc N 0.000
chr6.LjT16B20.120.nc Lotus japonicus chr6.LjT16B20.120.nc N 0.000
Ciclev10014811m.g Citrus clementina Ciclev10014811m.g N 0.000
Eucgr.D01435 Eucalyptus grandis Eucgr.D01435 N 0.000
evm.TU.supercontig_27.254 Carica papaya evm.TU.supercontig_27.254 N 0.000
GLYMA09G01440 Glycine max GLYMA09G01440 N 0.000
GLYMA15G12320 Glycine max GLYMA15G12320 N 0.000
Gorai.009G184100 Gossypium raimondii Gorai.009G184100 N 0.000
Gorai.010G249400 Gossypium raimondii Gorai.010G249400 N 0.000
Lus10000539.g Linum usitatissimum Lus10000539.g N 0.000
Lus10017554.g Linum usitatissimum Lus10017554.g N 0.000
MDP0000254936 Malus domestica MDP0000254936 N 0.000
orange1.1g008984m.g Citrus sinensis orange1.1g008984m.g N 0.000
PK04573.1 Cannabis sativa PK04573.1 N 0.000
Pm012494 Prunus mume Pm012494 N 0.000
POPTR_0006s01720 Populus trichocarpa POPTR_0006s01720 N 0.000
PRUPE_ppa003910mg Prunus persica PRUPE_ppa003910mg N 0.000
SapurV1A.0359s0250 Salix purpurea SapurV1A.0359s0250 N 0.000
SapurV1A.0823s0110 Salix purpurea SapurV1A.0823s0110 N 0.000
SCL13 Arabidopsis lyrata fgenesh2_kg.7__2586__AT4G17230.1 N 0.000
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.000
TCM_030393 Theobroma cacao TCM_030393 N 0.000