T (Ornithorhynchus anatinus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSOANG00000012289 T340177_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
T
M05809_2.00 		Homo sapiens
NANGTGYGAHWWNTVRCACCTN
NAGGTGYBANWWDTCRCACNTN		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_1 		0.912 0.955
T
M05810_2.00 		Homo sapiens
DTCRCAYVTABGTGYGAH
DTCRCACVTABRTGYGAH		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_2 		0.912 0.955
T
M09427_2.00 		Homo sapiens
BYNVCANNNVDGTGWKARDN
NHYTMWCACHBNNNTGBNRV		 Misc
Kulakovskiy et al.(2013)
BRAC_HUMAN.H11MO.0.A 		0.912 0.955
T
M11384_2.00 		Homo sapiens
MKHBTSACACSTAGGTGTGAAATK
MATTTCACACCTASGTGTSAVDMK		 Transfac
Matys et al.(2006)
V$BRACH_01 		0.912 0.955
T
M05811_2.00 		Homo sapiens
NABGTGYGAHWWNTVRCACSTN
NASGTGYBANWWDTCRCACVTN		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_1 		0.912 0.955
T
M05812_2.00 		Homo sapiens
DTMRCAYVTABGTGYKAH
DTMRCACVTABRTGYKAH		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_2 		0.912 0.955
T
M09431_2.00 		Mus musculus
VVNRAWTTSACASNYHDVTGBNMAN
NTKNVCABHDRNSTGTSAAWTYNBB		 Misc
Kulakovskiy et al.(2013)
BRAC_MOUSE.H11MO.0.B 		0.912 0.949
T
M09651_2.00 		Mus musculus
NYTVDCASNNNNSTGHBARNN
NNYTVDCASNNNNSTGHBARN		 Misc
Heinz et al.(2010)
Mesoendoderm-Brachyury_GSE54963 		0.912 0.949
TBX19
M03562_2.00 		Homo sapiens
NDTVRCACVTANGTGYKANN
NNTMRCACNTABGTGYBAHN		 SELEX
Jolma et al.(2013)
TBX19_1 		0.881 0.847
TBX19
M05803_2.00 		Homo sapiens
NAGGTGYBAHWDTMRCACNTN
NANGTGYKAHWDTVRCACCTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX 		0.881 0.847
TBX19
M05804_2.00 		Homo sapiens
NANGTGYKAHWDTVRCACSTN
NASGTGYBAHWDTMRCACNTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX 		0.881 0.847
byn
M03984_2.00 		Drosophila melanogaster
ABGTGYGADDD
HHHTCRCACVT		 SELEX
Nitta et al.(2015)
byn_1 		0.815 0.761
byn
M03985_2.00 		Drosophila melanogaster
DNGTGYBAHWWDTVRCACNH
DNGTGYBAHWWDTVRCACNH		 SELEX
Nitta et al.(2015)
byn_2 		0.815 0.761
byn
M03986_2.00 		Drosophila melanogaster
RDGTGYGADNDNDNNNNNNDRDGTGYGADD
HHTCRCACHYHNNNNNNHNHNHTCRCACHY		 SELEX
Nitta et al.(2015)
byn_3 		0.815 0.761
byn
M03987_2.00 		Drosophila melanogaster
NNTMRCAYNWWNRTGYKAHN
NDTMRCAYNWWNRTGYKANN		 SELEX
Nitta et al.(2015)
byn_4 		0.815 0.761
byn
M06453_2.00 		Drosophila melanogaster
ADGTGCDA
THGCACHT		 B1H
Zhu et al.(2011)
byn_FlyReg_FBgn0011723 		0.815 0.761
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000019441 T-box 44 219

Links

Other T-box family TFs
Other Ornithorhynchus anatinus TFs

176 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA016274 Oryza indica BGIOSGA016274 N
BRADI5G08167 Brachypodium distachyon BRADI5G08167 N
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N
Ca_08511 Cicer arietinum Ca_08511 N
Ca_09562 Cicer arietinum Ca_09562 I
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N
F775_11712 Aegilops tauschii F775_11712 N
GLYMA05G28090 Glycine max GLYMA05G28090 N
GLYMA18G00840 Glycine max GLYMA18G00840 N
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N
GRMZM2G143205 Zea mays GRMZM2G143205 N
GSMUA_Achr9G01330_001 Musa acuminata GSMUA_Achr9G01330_001 N
LPERR04G07320 Leersia perrieri LPERR04G07320 N
MTR_8g080800 Medicago truncatula MTR_8g080800 N
OB04G17680 Oryza brachyantha OB04G17680 N
OBART04G10490 Oryza barthii OBART04G10490 N
OGLUM04G10170 Oryza glumaepatula OGLUM04G10170 N
OPUNC04G08570 Oryza punctata OPUNC04G08570 N
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N
ORGLA02G0342600 Oryza glaberrima ORGLA02G0342600 N
ORGLA04G0075400 Oryza glaberrima ORGLA04G0075400 N
ORUFI04G11670 Oryza rufipogon ORUFI04G11670 N
OS04G0388500 Oryza sativa OS04G0388500 N
Pavir.Ga01952 Panicum virgatum Pavir.Ga01952 N
Pavir.Gb01963 Panicum virgatum Pavir.Gb01963 N
PDK_20s1550381g002 Phoenix dactylifera PDK_20s1550381g002 N
PK06349.1 Cannabis sativa PK06349.1 N
Pm007031 Prunus mume Pm007031 N
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N
Sb06g013850 Sorghum bicolor Sb06g013850 N
Si009249m.g Setaria italica Si009249m.g N
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N
TCM_008731 Theobroma cacao TCM_008731 N
Traes_2AL_773EA7A5A Triticum aestivum Traes_2AL_773EA7A5A N
Traes_2AS_AE392E835 Triticum aestivum Traes_2AS_AE392E835 N
Traes_2BS_AF4D5351B Triticum aestivum Traes_2BS_AF4D5351B N
Traes_2DL_474B433DF Triticum aestivum Traes_2DL_474B433DF N
Traes_7DS_7B303CBAF Triticum aestivum Traes_7DS_7B303CBAF N
TRIUR3_26386 Triticum urartu TRIUR3_26386 N
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N