TC012346 (Tribolium castaneum)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 TC012346 T340910_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx2
M00830_2.00 		Mus musculus
NYVDCACBHN
NDVGTGHBRN		 PBM
Weirauch et al.(2013)
pTH3751 		0.737 0.519
TBX2
M03556_2.00 		Homo sapiens
GGTGTKADDWNTVACACB
VGTGTBANWHHTMACACC		 SELEX
Jolma et al.(2013)
TBX2_1 		0.737 0.519
TBX2
M03557_2.00 		Homo sapiens
NAGGTGTBAWN
NWTVACACCTN		 SELEX
Jolma et al.(2013)
TBX2_2 		0.737 0.519
TBX2
M05799_2.00 		Homo sapiens
NNVRCRCNNN
NNNGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX 		0.737 0.519
Tbx2
M08044_2.00 		Mus musculus
GCHYBCTGGGADHTGTAGTYH
DRACTACADHTCCCAGVRDGC		 ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2 		0.737 0.519
TBX2
M11381_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q2 		0.737 0.519
TBX2
M11382_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX2_Q5 		0.737 0.519
TBX2
M05800_2.00 		Homo sapiens
NNVRCRCBNN
NNVGYGYBNN		 SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX 		0.737 0.519
Tbx3
M00834_2.00 		Mus musculus
NHNDCACNHN
NDNGTGHNDN		 PBM
Weirauch et al.(2013)
pTH3998 		0.737 0.514
TBX3
M05801_2.00 		Homo sapiens
NDSGTGTBRN
NYVACACSHN		 SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX 		0.737 0.514
TBX3
M09426_2.00 		Homo sapiens
DVDGGTGBNAR
YTNVCACCHBH		 Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C 		0.737 0.514
Tbx3
M09429_2.00 		Mus musculus
RRGGTGBBR
YVVCACCYY		 Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B 		0.737 0.514
TBX3
M05802_2.00 		Homo sapiens
DAGGTGTKAN
NTMACACCTH		 SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX 		0.737 0.514
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC012346-PA T-box 21 202

Links

Other T-box family TFs
Other Tribolium castaneum TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G12950 Brachypodium distachyon BRADI2G12950 N
F775_01832 Aegilops tauschii F775_01832 N
GRMZM2G010085 Zea mays GRMZM2G010085 N
LjSGA_031154.1 Lotus japonicus LjSGA_031154.1 N
LPERR01G13970 Leersia perrieri LPERR01G13970 N
mgf011812m Mimulus guttatus mgf011812m N
MLOC_10329 Hordeum vulgare MLOC_10329 N
OB01G25270 Oryza brachyantha OB01G25270 N
OBART01G15490 Oryza barthii OBART01G15490 N
OGLUM01G17850 Oryza glumaepatula OGLUM01G17850 N
OLONG_013778 Oryza longistaminata OLONG_013778 N
OMERI01G14330 Oryza meridionalis OMERI01G14330 N
ORGLA01G0126700 Oryza glaberrima ORGLA01G0126700 N
ORUFI01G17280 Oryza rufipogon ORUFI01G17280 N
OS01G0367900 Oryza sativa OS01G0367900 N
Pavir.Ea01374 Panicum virgatum Pavir.Ea01374 N
Pavir.Eb01430 Panicum virgatum Pavir.Eb01430 N
Pavir.J08354 Panicum virgatum Pavir.J08354 N
Pavir.J38656 Panicum virgatum Pavir.J38656 N
PGSC0003DMG400030785 Solanum tuberosum PGSC0003DMG400030785 N
Sb03g014780 Sorghum bicolor Sb03g014780 N
Si000122m.g Setaria italica Si000122m.g N
Solyc06g054560.2 Solanum lycopersicum Solyc06g054560.2 N
Traes_1AS_0523686DD Triticum aestivum Traes_1AS_0523686DD N
Traes_1BS_3B0E04EC6 Triticum aestivum Traes_1BS_3B0E04EC6 N
Traes_1DS_0761D66A3 Triticum aestivum Traes_1DS_0761D66A3 N
TRIUR3_20056 Triticum urartu TRIUR3_20056 N