TBP (Pan troglodytes)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 ENSPTRG00000018827 T342411_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		1.000 1.000
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		1.000 1.000
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		1.000 1.000
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		1.000 1.000
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		1.000 1.000
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		1.000 1.000
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		1.000 1.000
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		1.000 1.000
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		1.000 1.000
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		1.000 1.000
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.808 0.808
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.808 0.808
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.808 0.808
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000058203 TBP 156 238
ENSPTRP00000058203 TBP 246 329

Links

Other TBP family TFs
Other Pan troglodytes TFs

773 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R009325 Aptenodytes forsteri Afo_R009325 N
Alligator_sinensis_CCG003694.1 Alligator sinensis Alligator_sinensis_CCG003694.1 N
Brh_R007854 Buceros rhinoceros Brh_R007854 N
Cmyd_10010411 Chelonia mydas Cmyd_10010411 N
ENSCSAG00000018244 Chlorocebus sabaeus ENSCSAG00000018244 N
ENSLOCG00000007283 Lepisosteus oculatus ENSLOCG00000007283 N
ENSNLEG00000008217 Nomascus leucogenys ENSNLEG00000008217 N
ENSOARG00000004353 Ovis aries ENSOARG00000004353 N
ENSONIG00000002831 Oreochromis niloticus ENSONIG00000002831 N
ENSP00000299466-D1 Bos grunniens ENSP00000299466-D1 N
ENSPFOG00000015799 Poecilia formosa ENSPFOG00000015799 N
ENSXMAG00000016273 Xiphophorus maculatus ENSXMAG00000016273 N
Gfo_R000617 Geospiza fortis Gfo_R000617 N
Myotis_brandtii_Sall3_10034211 Myotis brandtii Myotis_brandtii_Sall3_10034211 N
SALL1 Ornithorhynchus anatinus ENSOANG00000013399 N
sall1 Xenopus tropicalis XB-GENE-491393 N
Sall1 Rattus norvegicus ENSRNOG00000013907 N
SALL1 Otolemur garnettii ENSOGAG00000027316 N
sall1.L Xenopus laevis XB-GENE-866060 N
sall1a Oryzias latipes ENSORLG00000013827 N
sall1a Tetraodon nigroviridis ENSTNIG00000004257 N
sall1a Takifugu rubripes ENSTRUG00000008950 N
sall1a Gasterosteus aculeatus ENSGACG00000016702 N
SALL3 Procavia capensis ENSPCAG00000006522 N
SALL3 Macaca mulatta ENSMMUG00000000286 N
SALL3 Myotis lucifugus ENSMLUG00000010582 N
SALL3 Dasypus novemcinctus ENSDNOG00000025483 N
Sall3 Dipodomys ordii ENSDORG00000002702 N
SALL3 Homo sapiens ENSG00000256463 N
SALL3 Gorilla gorilla ENSGGOG00000008127 N
SALL3 Otolemur garnettii ENSOGAG00000031681 N
SALL3 Sus scrofa ENSSSCG00000004858 N
Sall3 Rattus norvegicus ENSRNOG00000026116 N
SALL3 Loxodonta africana ENSLAFG00000013521 N
SALL3 Callithrix jacchus ENSCJAG00000007332 N
Tal_R008175 Tyto alba Tal_R008175 N
XP_002936493 Xenopus tropicalis XP_002936493 N
XP_002936494 Xenopus tropicalis XP_002936494 N
XP_002936495 Xenopus tropicalis XP_002936495 N