OGLUM05G23780 (Oryza glumaepatula)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OGLUM05G23780 T344095_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.941 0.500
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.939 0.500
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.922 0.491
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.901 0.440
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.894 0.448
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.894 0.448
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.885 0.466
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.885 0.466
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.884 0.414
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.884 0.414
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.884 0.414
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.881 0.457
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.881 0.457
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.872 0.414
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.872 0.414
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.859 0.422
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM05G23780.1 TCP 70 223

Links

Other TCP family TFs
Other Oryza glumaepatula TFs

421 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG002534.1 Alligator sinensis Alligator_sinensis_CCG002534.1 I
Cmyd_10003951 Chelonia mydas Cmyd_10003951 I
ENSAMEG00000014121 Ailuropoda melanoleuca ENSAMEG00000014121 I
ENSBTAP00000022702-D1 Bos grunniens ENSBTAP00000022702-D1 I
ENSCSAG00000010379 Chlorocebus sabaeus ENSCSAG00000010379 I
ENSFALG00000004741 Ficedula albicollis ENSFALG00000004741 I
ENSMPUG00000016838 Mustela putorius furo ENSMPUG00000016838 I
ENSNLEG00000004506 Nomascus leucogenys ENSNLEG00000004506 I
ENSP00000380019 Macaca fascicularis ENSP00000380019 I
ENSPANG00000014845 Papio anubis ENSPANG00000014845 I
ENSPPYG00000004196 Pongo abelii ENSPPYG00000004196 I
ENSSHAG00000015330 Sarcophilus harrisii ENSSHAG00000015330 I
ENSSTOG00000009902 Ictidomys tridecemlineatus ENSSTOG00000009902 I
Myotis_brandtii_ZNF384_10009390 Myotis brandtii Myotis_brandtii_ZNF384_10009390 I
Ogr12333 Ophisaurus gracilis Ogr12333 I
Pvit_12574 Pogona vitticeps Pvit_12574 I
Zfp384 Mus musculus ENSMUSG00000038346 I
Zfp384 Rattus norvegicus ENSRNOG00000017066 I
ZNF384 Pan troglodytes ENSPTRG00000004584 I
ZNF384 Anolis carolinensis ENSACAG00000006099 I
ZNF384 Bos taurus ENSBTAG00000017072 I
ZNF384 Canis familiaris ENSCAFG00000014740 I
ZNF384 Choloepus hoffmanni ENSCHOG00000006697 I
ZNF384 Callithrix jacchus ENSCJAG00000007944 I
ZNF384 Dasypus novemcinctus ENSDNOG00000003936 I
ZNF384 Equus caballus ENSECAG00000009490 I
ZNF384 Sus scrofa ENSSSCG00000000702 I
ZNF384 Erinaceus europaeus ENSEEUG00000012950 I
ZNF384 Pteropus vampyrus ENSPVAG00000011440 I
ZNF384 Myotis lucifugus ENSMLUG00000013771 I
ZNF384 Felis catus ENSFCAG00000006882 I
ZNF384 Procavia capensis ENSPCAG00000012951 I
ZNF384 Homo sapiens ENSG00000126746 D
ZNF384 Ochotona princeps ENSOPRG00000003626 I
ZNF384 Otolemur garnettii ENSOGAG00000010052 I
ZNF384 Oryctolagus cuniculus ENSOCUG00000003747 I
ZNF384 Gorilla gorilla ENSGGOG00000016048 I
ZNF384 Loxodonta africana ENSLAFG00000008381 I
ZNF384 Monodelphis domestica ENSMODG00000018105 I
ZNF384 Macaca mulatta ENSMMUG00000016990 I
znf384l Danio rerio ENSDARG00000001015 N