Pvit_12574 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_12574 T137325_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF384
M04451_2.00 		Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA		 SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX 		0.771 0.918
ZNF384
M08306_2.00 		Homo sapiens
CTTTTTTTT
AAAAAAAAG		 ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE 		0.771 0.918
ZNF384
M08090_2.00 		Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW		 ChIP-seq
Mathelier et al.(2014)
MA1125.1 		0.771 0.918
ZNF384
M08888_2.00 		Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV		 Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C 		0.771 0.918
ZNF384
M10209_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CIZ_01 		0.771 0.918
ZNF384
M04452_2.00 		Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM		 SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX 		0.771 0.918
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_12574 C2H2 ZF 240 262
Pvit_12574 C2H2 ZF 268 290
Pvit_12574 C2H2 ZF 296 318
Pvit_12574 C2H2 ZF 329 351
Pvit_12574 C2H2 ZF 357 379
Pvit_12574 C2H2 ZF 385 409
Pvit_12574 C2H2 ZF 415 437
Pvit_12574 C2H2 ZF 445 467

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF384 Anolis carolinensis ENSACAG00000006099 I 0.827
Ogr12333 Ophisaurus gracilis Ogr12333 I 0.827
ZNF384 Bos taurus ENSBTAG00000017072 I 0.800
ZNF384 Dasypus novemcinctus ENSDNOG00000003936 I 0.800
ZNF384 Equus caballus ENSECAG00000009490 I 0.800
ZNF384 Tursiops truncatus ENSTTRG00000011754 I 0.800
ENSBTAP00000022702-D1 Bos grunniens ENSBTAP00000022702-D1 I 0.800
ENSFALG00000004741 Ficedula albicollis ENSFALG00000004741 I 0.791
Alligator_sinensis_CCG002534.1 Alligator sinensis Alligator_sinensis_CCG002534.1 I 0.785
Cmyd_10003951 Chelonia mydas Cmyd_10003951 I 0.785
ZNF384 Monodelphis domestica ENSMODG00000018105 I 0.780
ENSSHAG00000015330 Sarcophilus harrisii ENSSHAG00000015330 I 0.780
znf384l Danio rerio ENSDARG00000001015 N 0.773
ENSAMEG00000014121 Ailuropoda melanoleuca ENSAMEG00000014121 I 0.771
ZNF384 Canis familiaris ENSCAFG00000014740 I 0.771
ZNF384 Callithrix jacchus ENSCJAG00000007944 I 0.771
ENSCSAG00000010379 Chlorocebus sabaeus ENSCSAG00000010379 I 0.771
ZNF384 Felis catus ENSFCAG00000006882 I 0.771
ZNF384 Homo sapiens ENSG00000126746 D 0.771
ZNF384 Gorilla gorilla ENSGGOG00000016048 I 0.771
ZNF384 Loxodonta africana ENSLAFG00000008381 I 0.771
ZNF384 Macaca mulatta ENSMMUG00000016990 I 0.771
ENSMPUG00000016838 Mustela putorius furo ENSMPUG00000016838 I 0.771
ENSNLEG00000004506 Nomascus leucogenys ENSNLEG00000004506 I 0.771
ZNF384 Oryctolagus cuniculus ENSOCUG00000003747 I 0.771
ZNF384 Otolemur garnettii ENSOGAG00000010052 I 0.771
ZNF384 Ochotona princeps ENSOPRG00000003626 I 0.771
ENSPANG00000014845 Papio anubis ENSPANG00000014845 I 0.771
ZNF384 Procavia capensis ENSPCAG00000012951 I 0.771
ENSPPYG00000004196 Pongo abelii ENSPPYG00000004196 I 0.771
ZNF384 Pan troglodytes ENSPTRG00000004584 I 0.771
ZNF384 Sus scrofa ENSSSCG00000000702 I 0.771
ENSSTOG00000009902 Ictidomys tridecemlineatus ENSSTOG00000009902 I 0.771
ZNF384 Myotis lucifugus ENSMLUG00000013771 I 0.770
Myotis_brandtii_ZNF384_10009390 Myotis brandtii Myotis_brandtii_ZNF384_10009390 I 0.770
ZNF384 Choloepus hoffmanni ENSCHOG00000006697 I 0.769
ZNF384 Erinaceus europaeus ENSEEUG00000012950 I 0.764
ZNF384 Pteropus vampyrus ENSPVAG00000011440 I 0.760