CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_12000136
(
Monosiga brevicollis
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
fgenesh2_pg.scaffold_12000136
T344661_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_12000136
TCP
75
196
MTNAVLIKFVQDPTNCAIAATTESAKIAKHAHDANSVVVAGAGVDKYHQRGDVRNDVSSNKNKNKNKNKNKNKNKNKNKNKNKNKNKNKNKNKNKTKNKNKNKNKRTRTRTRTRTRPTTITT
Links
Other
TCP
family TFs
Other
Monosiga brevicollis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB003577
Biomphalaria glabrata
BGLB003577
N
0.917
BLOC1S6
Loxodonta africana
ENSLAFG00000000655
N
0.916
BLOC1S6
Sorex araneus
ENSSARG00000009861
N
0.916
Bra032973
Brassica rapa
Bra032973
N
0.852
CAOG_03637
Capsaspora owczarzaki
CAOG_03637
N
0.925
CGOC_0000468301
Cylicostephanus goldi
CGOC_0000468301
N
0.918
fgenesh1_pg.C_scaffold_4001082
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_4001082
N
0.921
GE16904
Drosophila yakuba
FBgn0234394
N
0.887
GF19613
Drosophila ananassae
FBgn0096620
N
0.905
GK18872
Drosophila willistoni
FBgn0220870
N
0.906
H311_00925
Anncaliia algerae
H311_00925
N
0.919
Hsal_00106--NA
Harpegnathos saltator
Hsal_00106--NA
N
0.915
JL09_g6305
Pichia kudriavzevii
JL09_g6305
N
0.915
Lus10019949.g
Linum usitatissimum
Lus10019949.g
N
0.876
Lus10042195.g
Linum usitatissimum
Lus10042195.g
N
0.859
OLONG_002570
Oryza longistaminata
OLONG_002570
I
0.931
ORUFI11G04600
Oryza rufipogon
ORUFI11G04600
N
0.926
ORUFI12G05060
Oryza rufipogon
ORUFI12G05060
N
0.926
Pavir.Fa00930
Panicum virgatum
Pavir.Fa00930
N
0.917
PVAR5_0486
Byssochlamys spectabilis
PVAR5_0486
N
0.926
Sec61g-ps1
Rattus norvegicus
ENSRNOG00000049451
N
0.930
Sec61gl
Rattus norvegicus
ENSRNOG00000049016
N
0.930
TRIUR3_02266
Triticum urartu
TRIUR3_02266
N
0.933
ZBAI_00205
Zygosaccharomyces bailii
ZBAI_00205
N
0.916