Pavir.Fa00930 (Panicum virgatum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pavir.Fa00930 T345001_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00930.1.p TCP 5 109

Links

Other TCP family TFs
Other Panicum virgatum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBAI_00205 Zygosaccharomyces bailii ZBAI_00205 N 0.932
JL09_g6305 Pichia kudriavzevii JL09_g6305 N 0.929
fgenesh1_pg.C_scaffold_4001082 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4001082 N 0.929
Sec61gl Rattus norvegicus ENSRNOG00000049016 N 0.928
Sec61g-ps1 Rattus norvegicus ENSRNOG00000049451 N 0.928
OLONG_002570 Oryza longistaminata OLONG_002570 I 0.928
TRIUR3_02266 Triticum urartu TRIUR3_02266 N 0.928
CGOC_0000468301 Cylicostephanus goldi CGOC_0000468301 N 0.928
Hsal_00106--NA Harpegnathos saltator Hsal_00106--NA N 0.927
H311_00925 Anncaliia algerae H311_00925 N 0.926
ORUFI11G04600 Oryza rufipogon ORUFI11G04600 N 0.926
PVAR5_0486 Byssochlamys spectabilis PVAR5_0486 N 0.926
BGLB003577 Biomphalaria glabrata BGLB003577 N 0.924
ORUFI12G05060 Oryza rufipogon ORUFI12G05060 N 0.918
fgenesh2_pg.scaffold_12000136 Monosiga brevicollis fgenesh2_pg.scaffold_12000136 N 0.917
CAOG_03637 Capsaspora owczarzaki CAOG_03637 N 0.915
GF19613 Drosophila ananassae FBgn0096620 N 0.915
BLOC1S6 Loxodonta africana ENSLAFG00000000655 N 0.913
BLOC1S6 Sorex araneus ENSSARG00000009861 N 0.912
GK18872 Drosophila willistoni FBgn0220870 N 0.906
GE16904 Drosophila yakuba FBgn0234394 N 0.889
Lus10019949.g Linum usitatissimum Lus10019949.g N 0.878
Lus10042195.g Linum usitatissimum Lus10042195.g N 0.860
Ca_24979 Cicer arietinum Ca_24979 N 0.841
TRIM56 Anolis carolinensis ENSACAG00000007859 N 0.835
Bra032973 Brassica rapa Bra032973 N 0.833
TRIUR3_03984 Triticum urartu TRIUR3_03984 N 0.827