Hsal_00106--NA (Harpegnathos saltator)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Hsal_00106--NA T344551_2.00 GigaDB (2015-Oct-22)
NCBI Gene Info:
The protein encoded by this gene is a major apoprotein of the chylomicron. It binds to a specific liver and peripheral cell receptor, and is essential for the normal catabolism of triglyceride-rich lipoprotein constituents. This gene maps to chromosome 19 in a cluster with the related apolipoprotein C1 and C2 genes. Mutations in this gene result in familial dysbetalipoproteinemia, or type III hyperlipoproteinemia (HLP III), in which increased plasma cholesterol and triglycerides are the consequence of impaired clearance of chylomicron and VLDL remnants. [provided by RefSeq, Jun 2016]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Hsal_00106--NA TCP 99 228

Links

Other TCP family TFs
Other Harpegnathos saltator TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
JL09_g6305 Pichia kudriavzevii JL09_g6305 N 0.974
BGLB003577 Biomphalaria glabrata BGLB003577 N 0.971
H311_00925 Anncaliia algerae H311_00925 N 0.967
PVAR5_0486 Byssochlamys spectabilis PVAR5_0486 N 0.966
CGOC_0000468301 Cylicostephanus goldi CGOC_0000468301 N 0.957
ORUFI11G04600 Oryza rufipogon ORUFI11G04600 N 0.939
ORUFI12G05060 Oryza rufipogon ORUFI12G05060 N 0.935
fgenesh1_pg.C_scaffold_4001082 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4001082 N 0.935
BLOC1S6 Loxodonta africana ENSLAFG00000000655 N 0.935
BLOC1S6 Sorex araneus ENSSARG00000009861 N 0.935
ZBAI_00205 Zygosaccharomyces bailii ZBAI_00205 N 0.930
Pavir.Fa00930 Panicum virgatum Pavir.Fa00930 N 0.927
OLONG_002570 Oryza longistaminata OLONG_002570 I 0.927
Sec61gl Rattus norvegicus ENSRNOG00000049016 N 0.920
Sec61g-ps1 Rattus norvegicus ENSRNOG00000049451 N 0.920
TRIUR3_02266 Triticum urartu TRIUR3_02266 N 0.919
fgenesh2_pg.scaffold_12000136 Monosiga brevicollis fgenesh2_pg.scaffold_12000136 N 0.915
PRUPE_ppa024046mg Prunus persica PRUPE_ppa024046mg N 0.913
CAOG_03637 Capsaspora owczarzaki CAOG_03637 N 0.911
GK18872 Drosophila willistoni FBgn0220870 N 0.908
Lus10019949.g Linum usitatissimum Lus10019949.g N 0.906
GF19613 Drosophila ananassae FBgn0096620 N 0.900
Lus10042195.g Linum usitatissimum Lus10042195.g N 0.897
GE16904 Drosophila yakuba FBgn0234394 N 0.891
LPERR02G20610 Leersia perrieri LPERR02G20610 N 0.872
OB07G12490 Oryza brachyantha OB07G12490 N 0.867
Bra032973 Brassica rapa Bra032973 N 0.857
Sb02g013020 Sorghum bicolor Sb02g013020 N 0.852
TRIM56 Anolis carolinensis ENSACAG00000007859 N 0.850
BGIOSGA037077 Oryza indica BGIOSGA037077 N 0.837
EFA80760.1 Polysphondylium pallidum EFA80760.1 N 0.831