OBART06G10610 (Oryza barthii)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 OBART06G10610 T345594_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.213
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.211
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.200
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.200
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.200
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.200
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.200
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.200
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.200
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.200
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.200
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.200
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.197
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.197
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.189
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.189
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.187
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.187
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.187
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.187
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.187
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.184
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.184
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.184
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.184
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.184
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.184
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.184
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART06G10610.1 TCR/CxC 857 893

Links

Other TCR/CxC family TFs
Other Oryza barthii TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011231 Aedes aegypti AAEL011231 I
AALB007603 Anopheles albimanus AALB007603 I
AARA005929 Anopheles arabiensis AARA005929 I
AATE013762 Anopheles atroparvus AATE013762 I
ACEP12797 Atta cephalotes ACEP12797 I
ACEP13260 Atta cephalotes ACEP13260 I
ACUA011505 Anopheles culicifacies ACUA011505 I
ACYPI066036 Acyrthosiphon pisum ACYPI066036 I
ACYPI48166 Acyrthosiphon pisum ACYPI48166 I
ACYPI56791 Acyrthosiphon pisum ACYPI56791 I
ADIR005732 Anopheles dirus ADIR005732 I
AEPI004043 Anopheles epiroticus AEPI004043 I
AFAF014433 Anopheles farauti AFAF014433 I
AFUN003486 Anopheles funestus AFUN003486 I
AGAP010438 Anopheles gambiae AGAP010438 D
AGAP028221 Anopheles gambiae AGAP028221 I
AMEM014965 Anopheles merus AMEM014965 I
AMIN004996 Anopheles minimus AMIN004996 I
AQUA005997 Anopheles quadriannulatus AQUA005997 I
ASIS019127 Anopheles sinensis ASIS019127 I
A_05482 Schistosoma haematobium A_05482 I
Cflo_03603--XP_001120531.1_APIME Camponotus floridanus Cflo_03603--XP_001120531.1_APIME I
Cflo_03607--XP_395932.2_APIME Camponotus floridanus Cflo_03607--XP_395932.2_APIME I
CLEC007515 Cimex lectularius CLEC007515 I
CLEC025065 Cimex lectularius CLEC025065 I
csin104466 Clonorchis sinensis csin104466 I
DAPPUDRAFT_290668 Daphnia pulex DAPPUDRAFT_290668 I
DAPPUDRAFT_290673 Daphnia pulex DAPPUDRAFT_290673 I
DILT_0000083601 Diphyllobothrium latum DILT_0000083601 N
eg Drosophila melanogaster FBgn0000560 D
GA18381 Drosophila pseudoobscura FBgn0078384 I
GA18413 Drosophila pseudoobscura FBgn0078415 I
GA20312 Drosophila pseudoobscura FBgn0080307 I
GB48727 Apis mellifera GB48727 I
GB51231 Apis mellifera GB51231 I
GB52331 Apis mellifera GB52331 I
GD12173 Drosophila simulans FBgn0183909 I
GD15001 Drosophila simulans FBgn0186673 I
GE19793 Drosophila yakuba FBgn0237126 I
GE22389 Drosophila yakuba FBgn0239612 I
GE22392 Drosophila yakuba FBgn0239615 I
GE23274 Drosophila yakuba FBgn0240471 I
GF24121 Drosophila ananassae FBgn0101115 I
GF24122 Drosophila ananassae FBgn0101116 I
GF25170 Drosophila ananassae FBgn0102162 I
GG13292 Drosophila erecta FBgn0105564 I
GG13294 Drosophila erecta FBgn0105566 I
GG16225 Drosophila erecta FBgn0108460 I
GH16373 Drosophila grimshawi FBgn0123844 I
GH16981 Drosophila grimshawi FBgn0124452 I
GH16982 Drosophila grimshawi FBgn0124453 I
GI11566 Drosophila mojavensis FBgn0134326 I
GI11896 Drosophila mojavensis FBgn0134654 I
GI11900 Drosophila mojavensis FBgn0134658 I
GJ11245 Drosophila virilis FBgn0198506 I
GJ13774 Drosophila virilis FBgn0200993 I
GK10545 Drosophila willistoni FBgn0212560 I
GK10566 Drosophila willistoni FBgn0212581 I
GK17344 Drosophila willistoni FBgn0219343 I
GL12762 Drosophila persimilis FBgn0150368 I
GL12764 Drosophila persimilis FBgn0150370 I
GL24862 Drosophila persimilis FBgn0162450 I
GM22199 Drosophila sechellia FBgn0177069 I
HDID_0000406601 Hymenolepis diminuta HDID_0000406601 I
HHAL001315-PA Halyomorpha halys HHAL001315-PA I
HMEL010451 Heliconius melpomene HMEL010451 I
HNAJ_0001369901 Hymenolepis nana HNAJ_0001369901 I
Hsal_02927--XP_395932.2_APIME Harpegnathos saltator Hsal_02927--XP_395932.2_APIME I
Hsal_02933--XP_001120662.1_APIME Harpegnathos saltator Hsal_02933--XP_001120662.1_APIME I
Hsal_02936--XP_001120531.1_APIME Harpegnathos saltator Hsal_02936--XP_001120531.1_APIME I
KGM_10290 Danaus plexippus KGM_10290 I
KGM_21348 Danaus plexippus KGM_21348 I
kni Drosophila melanogaster FBgn0001320 D
kni Drosophila virilis FBgn0013118 I
kni Drosophila simulans FBgn0044187 I
kni Drosophila sechellia FBgn0044208 I
knrl Drosophila melanogaster FBgn0001323 D
L798_11128 Zootermopsis nevadensis L798_11128 I
LCUP004920 Lucilia cuprina LCUP004920 I
LCUP004922 Lucilia cuprina LCUP004922 I
LDEC003050 Leptinotarsa decemlineata LDEC003050 I
MDOA002495 Musca domestica MDOA002495 I
MDOA008593 Musca domestica MDOA008593 I
MDOA012160 Musca domestica MDOA012160 I
nRc.2.0.1.g43935 Romanomermis culicivorax nRc.2.0.1.g43935 I
NV16468 Nasonia vitripennis NV16468 I
PHUM468660 Pediculus humanus PHUM468660 I
PHUM470190 Pediculus humanus PHUM470190 I
PPAI002202 Phlebotomus papatasi PPAI002202 I
RPRC003216 Rhodnius prolixus RPRC003216 I
SINV19432 Solenopsis invicta SINV19432 I
SINV19531 Solenopsis invicta SINV19531 I
SMAR012614 Strigamia maritima SMAR012614 I
SMTD_0001266401 Schistosoma mattheei SMTD_0001266401 I
SPER_0001282801 Spirometra erinaceieuropaei SPER_0001282801 N
SSLN_0000865601 Schistocephalus solidus SSLN_0000865601 N
SVE_0532500 Strongyloides venezuelensis SVE_0532500 I
T265_13094 Opisthorchis viverrini T265_13094 I
TC003409 Tribolium castaneum TC003409 I
TC003413 Tribolium castaneum TC003413 I
tetur34g00430 Tetranychus urticae tetur34g00430 I
TRE_0000379501 Trichobilharzia regenti TRE_0000379501 I