AACERI_AaceriADL067C (Saccharomycetaceae sp ashbya aceri)
VHR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04001 (Vhr1) IPR007147 AACERI_AaceriADL067C T350397_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VHR1
M08640_2.00 		Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA		 Misc
DeBoer et al.(2011)
YIL056W_1325 		0.835 0.835
VHR2
M00917_2.00 		Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN		 PBM
Gordan et al.(2011)
Vhr2 		0.813 0.813
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGO11707 VHR1 9 99

Links

Other VHR1 family TFs
Other Saccharomycetaceae sp ashbya aceri TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0000590301 Ascaris lumbricoides ALUE_0000590301 N
ASIM_0001676401 Anisakis simplex ASIM_0001676401 N
ASU_04966 Ascaris suum ASU_04966 N
Bm4541 Brugia malayi Bm4541 N
CBG10038 Caenorhabditis briggsae CBG10038 N
CJA06713 Caenorhabditis japonica CJA06713 N
CRE25566 Caenorhabditis remanei CRE25566 N
EEL_0000246901 Elaeophora elaphi EEL_0000246901 N
EVEC_0000342301 Enterobius vermicularis EVEC_0000342301 N
gei-13 Caenorhabditis elegans WBGene00001570 N
Hba_11216 Heterorhabditis bacteriophora Hba_11216 N
HCOI00039700 Haemonchus contortus HCOI00039700 N
L596_g10637 Steinernema carpocapsae L596_g10637 N
L889_g22347 Steinernema feltiae L889_g22347 N
L892_g20284 Steinernema scapterisci L892_g20284 N
L893_g18581 Steinernema glaseri L893_g18581 N
L898_g16670 Steinernema monticolum L898_g16670 N
LOAG_17673 Loa loa LOAG_17673 N
nAv.1.0.1.g09085 Acanthocheilonema viteae nAv.1.0.1.g09085 N
nDi.2.2.2.g00142 Dirofilaria immitis nDi.2.2.2.g00142 N
nLs.2.1.2.g08165 Litomosoides sigmodontis nLs.2.1.2.g08165 N
Ppa-gei-13 Pristionchus pacificus PPA19882 N
SMUV_0000711101 Syphacia muris SMUV_0000711101 N
TCLT_0000679601 Thelazia callipaeda TCLT_0000679601 N
WBGene00245587 Onchocerca volvulus WBGene00245587 N