CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10011856m.g
(
Citrus clementina
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Ciclev10011856m.g
T351582_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10011856m
WRC
153
195
PEPGRCRRTDGKKWRCSRDVVAGHKYCERHMHRGRNRSRKHVE
Links
Other
WRC
family TFs
Other
Citrus clementina
TFs
613 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB000327
Anopheles albimanus
AALB000327
I
0.000
AARA005138
Anopheles arabiensis
AARA005138
I
0.000
ACAC_0001096101
Angiostrongylus cantonensis
ACAC_0001096101
N
0.000
ACEP26487
Atta cephalotes
ACEP26487
I
0.000
ACHR004287
Anopheles christyi
ACHR004287
I
0.000
ACOC_0000018801
Angiostrongylus costaricensis
ACOC_0000018801
N
0.000
ACUA026846
Anopheles culicifacies
ACUA026846
N
0.000
ACYPI007360
Acyrthosiphon pisum
ACYPI007360
N
0.000
ADIR006768
Anopheles dirus
ADIR006768
I
0.000
AEPI004828
Anopheles epiroticus
AEPI004828
I
0.000
Afo_R006907
Aptenodytes forsteri
Afo_R006907
I
0.000
AFUN001295
Anopheles funestus
AFUN001295
I
0.000
AFUN010407
Anopheles funestus
AFUN010407
N
0.000
AMAG_05753
Allomyces macrogynus
AMAG_05753
N
0.000
AMAM003654
Anopheles maculatus
AMAM003654
I
0.000
AMAM009154
Anopheles maculatus
AMAM009154
I
0.000
AMEC011816
Anopheles melas
AMEC011816
I
0.000
AMEC016887
Anopheles melas
AMEC016887
I
0.000
AMIN005749
Anopheles minimus
AMIN005749
I
0.000
AMIN006279
Anopheles minimus
AMIN006279
I
0.000
ANCCEY_11361
Ancylostoma ceylanicum
ANCCEY_11361
I
0.000
ANCCEY_13939
Ancylostoma ceylanicum
ANCCEY_13939
I
0.000
AQUA000678
Anopheles quadriannulatus
AQUA000678
I
0.000
augustus_masked-nMf.1.1.scaf20573-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf20573-processed-gene-0.0
I
0.000
A_07396
Schistosoma haematobium
A_07396
I
0.000
A_07699
Schistosoma haematobium
A_07699
I
0.000
BARX2
Tupaia belangeri
ENSTBEG00000000641
I
0.000
BARX2
Vicugna pacos
ENSVPAG00000010480
I
0.000
BGLB001705
Biomphalaria glabrata
BGLB001705
I
0.000
BTMF_0000212801
Brugia timori
BTMF_0000212801
I
0.000
BXY_1244000
Bursaphelenchus xylophilus
BXY_1244000
N
0.000
CJA08488
Caenorhabditis japonica
CJA08488
I
0.000
CLEC007143
Cimex lectularius
CLEC007143
I
0.000
Crx
Mus musculus
ENSMUSG00000041578
D
0.000
D915_08446
Fasciola hepatica
D915_08446
I
0.000
D915_09728
Fasciola hepatica
D915_09728
N
0.000
DME_0000391201
Dracunculus medinensis
DME_0000391201
I
0.000
EFV59996
Trichinella spiralis
EFV59996
N
0.000
EFV60006
Trichinella spiralis
EFV60006
N
0.000
ENSCING00000013809
Ciona intestinalis
ENSCING00000013809
I
0.000
ENSECAG00000023678
Equus caballus
ENSECAG00000023678
I
0.000
ENSMEUG00000002781
Macropus eugenii
ENSMEUG00000002781
I
0.000
ENSMICG00000002512
Microcebus murinus
ENSMICG00000002512
I
0.000
ENSOCUG00000029553
Oryctolagus cuniculus
ENSOCUG00000029553
I
0.000
ENSSSCG00000024056
Sus scrofa
ENSSSCG00000024056
I
0.000
EVEC_0000238601
Enterobius vermicularis
EVEC_0000238601
I
0.000
e_gw.543.9.1
Branchiostoma floridae
e_gw.543.9.1
N
0.000
e_gw.814.10.1
Branchiostoma floridae
e_gw.814.10.1
I
0.000
e_gw.85.119.1
Branchiostoma floridae
e_gw.85.119.1
N
0.000
GB40331
Apis mellifera
GB40331
I
0.000
GB42226
Apis mellifera
GB42226
I
0.000
GH24924
Drosophila grimshawi
FBgn0132379
I
0.000
GPLIN_000644800
Globodera pallida
GPLIN_000644800
I
0.000
GPLIN_001127900
Globodera pallida
GPLIN_001127900
I
0.000
Hba_10596
Heterorhabditis bacteriophora
Hba_10596
I
0.000
Hba_14264
Heterorhabditis bacteriophora
Hba_14264
I
0.000
HMEL006348
Heliconius melpomene
HMEL006348
I
0.000
hoxd9.S
Xenopus laevis
XB-GENE-485796
I
0.000
HPLM_0001305101
Haemonchus placei
HPLM_0001305101
N
0.000
ISCW017713
Ixodes scapularis
ISCW017713
I
0.000
L892_g18619
Steinernema scapterisci
L892_g18619
N
0.000
L893_g32186
Steinernema glaseri
L893_g32186
N
0.000
LCUP010259
Lucilia cuprina
LCUP010259
I
0.000
LDEC010767
Leptinotarsa decemlineata
LDEC010767
I
0.000
MCINX001506
Melitaea cinxia
MCINX001506
I
0.000
MESCA012524
Megaselia scalaris
MESCA012524
I
0.000
MhA1_Contig290.frz3.gene10
Meloidogyne hapla
MhA1_Contig290.frz3.gene10
I
0.000
nkx2-4
Xenopus tropicalis
XB-GENE-487481
I
0.000
OESDEN_08182
Oesophagostomum dentatum
OESDEN_08182
I
0.000
OESDEN_23981
Oesophagostomum dentatum
OESDEN_23981
I
0.000
Otx2
Mus musculus
ENSMUSG00000021848
D
0.000
PITX1
Homo sapiens
ENSG00000069011
D
0.000
Pitx1
Mus musculus
ENSMUSG00000021506
D
0.000
Pitx3
Mus musculus
ENSMUSG00000025229
D
0.000
PXEA_0000709901
Protopolystoma xenopodis
PXEA_0000709901
I
0.000
PXEA_0000830701
Protopolystoma xenopodis
PXEA_0000830701
I
0.000
PXEA_0001880101
Protopolystoma xenopodis
PXEA_0001880101
I
0.000
Sakowv30000867m.g
Saccoglossus kowalevskii
Sakowv30000867m.g
I
0.000
SBAD_0000181501
Soboliphyme baturini
SBAD_0000181501
N
0.000
scaffold74-EXSNAP2012.8
Pristionchus exspectatus
scaffold74-EXSNAP2012.8
I
0.000
SCUD_0000012401
Schistosoma curassoni
SCUD_0000012401
I
0.000
SCUD_0001148701
Schistosoma curassoni
SCUD_0001148701
I
0.000
SINV23302
Solenopsis invicta
SINV23302
I
0.000
Sjc_0026350
Schistosoma japonicum
Sjc_0026350
N
0.000
Sjc_0039470
Schistosoma japonicum
Sjc_0039470
I
0.000
Sjc_0051960
Schistosoma japonicum
Sjc_0051960
I
0.000
Sjc_0075360
Schistosoma japonicum
Sjc_0075360
I
0.000
Smp_150810
Schistosoma mansoni
Smp_150810
I
0.000
SMTD_0001421101
Schistosoma mattheei
SMTD_0001421101
I
0.000
SMTD_0002268201
Schistosoma mattheei
SMTD_0002268201
N
0.000
SNAPOd2T00004995001
Oikopleura dioica
SNAPOd2T00004995001
N
0.000
SNAPOd2T00020544001
Oikopleura dioica
SNAPOd2T00020544001
I
0.000
SROB_0000845601
Schistosoma rodhaini
SROB_0000845601
I
0.000
SROB_0001170301
Schistosoma rodhaini
SROB_0001170301
I
0.000
SROB_0001175701
Schistosoma rodhaini
SROB_0001175701
N
0.000
SVUK_0001921301
Strongylus vulgaris
SVUK_0001921301
I
0.000
TCNE_0000805901
Toxocara canis
TCNE_0000805901
I
0.000
TELCIR_03058
Teladorsagia circumcincta
TELCIR_03058
N
0.000
TELCIR_15720
Teladorsagia circumcincta
TELCIR_15720
I
0.000
TELCIR_25656
Teladorsagia circumcincta
TELCIR_25656
N
0.000
TRE_0000552801
Trichobilharzia regenti
TRE_0000552801
I
0.000