CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.543.9.1
(
Branchiostoma floridae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
e_gw.543.9.1
T227312_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.543.9.1
Homeodomain
83
120
RRVRVKWPSAATMILERFFQMDKNPTENQREEIARVCN
Links
Other
Homeodomain
family TFs
Other
Branchiostoma floridae
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.85.119.1
Branchiostoma floridae
e_gw.85.119.1
N
0.865
e_gw.543.8.1
Branchiostoma floridae
e_gw.543.8.1
N
0.772
L892_g18619
Steinernema scapterisci
L892_g18619
N
0.705
ACYPI007360
Acyrthosiphon pisum
ACYPI007360
N
0.704
ENSECAG00000023678
Equus caballus
ENSECAG00000023678
I
0.704
D915_09728
Fasciola hepatica
D915_09728
N
0.704
nkx2-4
Xenopus tropicalis
XB-GENE-487481
I
0.695
SNAPOd2T00004995001
Oikopleura dioica
SNAPOd2T00004995001
N
0.690
fgenesh2_pg.scaffold_72000050
Branchiostoma floridae
fgenesh2_pg.scaffold_72000050
N
0.678
D918_02763
Trichuris suis
D918_02763
N
0.671
SINV24463
Solenopsis invicta
SINV24463
N
0.664
CLEC007188
Cimex lectularius
CLEC007188
N
0.664
Sjc_0057900
Schistosoma japonicum
Sjc_0057900
N
0.664
AALB003620
Anopheles albimanus
AALB003620
N
0.664
ASTEI04298
Anopheles stephensi
ASTEI04298
N
0.664
DILT_0001226501
Diphyllobothrium latum
DILT_0001226501
I
0.661
SSLN_0001021301
Schistocephalus solidus
SSLN_0001021301
I
0.661
scro
Drosophila melanogaster
FBgn0028993
D
0.659
ACYPI061631
Acyrthosiphon pisum
ACYPI061631
N
0.653
DILT_0000246201
Diphyllobothrium latum
DILT_0000246201
N
0.651
SPER_0002786601
Spirometra erinaceieuropaei
SPER_0002786601
N
0.651
SPER_0003017401
Spirometra erinaceieuropaei
SPER_0003017401
N
0.651
PXEA_0002847001
Protopolystoma xenopodis
PXEA_0002847001
N
0.645
Sakowv30000867m.g
Saccoglossus kowalevskii
Sakowv30000867m.g
I
0.643
AMAM017394
Anopheles maculatus
AMAM017394
N
0.643
ISCW011755
Ixodes scapularis
ISCW011755
N
0.632
ACEP14712
Atta cephalotes
ACEP14712
N
0.631
YQE_02582
Dendroctonus ponderosae
YQE_02582
N
0.631
Ogr05812
Ophisaurus gracilis
Ogr05812
N
0.631
ANCCEY_11186
Ancylostoma ceylanicum
ANCCEY_11186
N
0.631
NECAME_06897
Necator americanus
NECAME_06897
N
0.631
SPU_019656
Strongylocentrotus purpuratus
SPU_019656
N
0.620
Afo_R004424
Aptenodytes forsteri
Afo_R004424
N
0.620
Brh_R009091
Buceros rhinoceros
Brh_R009091
N
0.620
Myotis_brandtii_SLC6A7_10034750
Myotis brandtii
Myotis_brandtii_SLC6A7_10034750
I
0.620
Ogr00063
Ophisaurus gracilis
Ogr00063
I
0.620
Tal_R010537
Tyto alba
Tal_R010537
N
0.620
MCOS_0000074401
Mesocestoides corti
MCOS_0000074401
N
0.620
ENSGMOG00000004079
Gadus morhua
ENSGMOG00000004079
N
0.619
ENSMEUG00000006330
Macropus eugenii
ENSMEUG00000006330
I
0.618
ENSSTOG00000013679
Ictidomys tridecemlineatus
ENSSTOG00000013679
I
0.618
D915_05491
Fasciola hepatica
D915_05491
I
0.618
MhA1_Contig1149.frz3.gene7
Meloidogyne hapla
MhA1_Contig1149.frz3.gene7
N
0.614
BGIBMGA000762
Bombyx mori
BGIBMGA000762
N
0.613
ENSMICG00000014969
Microcebus murinus
ENSMICG00000014969
N
0.613
Hsal_00498--XP_394578.2_APIME
Harpegnathos saltator
Hsal_00498--XP_394578.2_APIME
N
0.613
AATE015248
Anopheles atroparvus
AATE015248
N
0.613
AFAF019448
Anopheles farauti
AFAF019448
N
0.613
AMEM018396
Anopheles merus
AMEM018396
N
0.613
ANCDUO_22746
Ancylostoma duodenale
ANCDUO_22746
N
0.613
CGOC_0001416801
Cylicostephanus goldi
CGOC_0001416801
N
0.613
GPUH_0000280301
Gongylonema pulchrum
GPUH_0000280301
N
0.613
PXEA_0000454701
Protopolystoma xenopodis
PXEA_0000454701
N
0.613
ENSMEUG00000002971
Macropus eugenii
ENSMEUG00000002971
I
0.612
SPU_008196
Strongylocentrotus purpuratus
SPU_008196
N
0.612
Brh_R010078
Buceros rhinoceros
Brh_R010078
I
0.612
CBG11788
Caenorhabditis briggsae
CBG11788
N
0.610
CBG27683
Caenorhabditis briggsae
CBG27683
N
0.610
Ppa-ceh-28
Pristionchus pacificus
PPA19627
N
0.608
scaffold28-EXSNAP2012.55
Pristionchus exspectatus
scaffold28-EXSNAP2012.55
N
0.608
YQE_11906
Dendroctonus ponderosae
YQE_11906
N
0.605
AEPI008243
Anopheles epiroticus
AEPI008243
I
0.603
Pitx1
Mus musculus
ENSMUSG00000021506
D
0.602
ISCW005275
Ixodes scapularis
ISCW005275
I
0.602
CapteG187461
Capitella teleta
CapteG187461
I
0.601
EVEC_0000238601
Enterobius vermicularis
EVEC_0000238601
I
0.601
L898_g16919
Steinernema monticolum
L898_g16919
N
0.601
BGLB005976
Biomphalaria glabrata
BGLB005976
I
0.600