CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GLYMA08G08340 *(Glycine max)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	GLYMA08G08340	T352682_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.896	0.966
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.896	0.966
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.896	0.966
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.896	0.898
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.896	0.898
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.895	0.831
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.895	0.831
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.895	0.831
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.888	0.831
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.888	0.831
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.888	0.831
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.873	0.780
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.873	0.780
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.873	0.780
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.871	0.729
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.871	0.729
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.871	0.729
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.860	0.695
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.856	0.661
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.856	0.661
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.856	0.661
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.854	0.661
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.854	0.661
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.854	0.661
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.853	0.644
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.853	0.644
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.853	0.644
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.852	0.678
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.852	0.678
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.837	0.542
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.834	0.559
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.834	0.559
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.834	0.559
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.834	0.542
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.834	0.542
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.833	0.542
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.830	0.593
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.822	0.508
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.821	0.508
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.821	0.508
WRKY59 M07382_2.00	Arabidopsis thaliana	NDWWAGTCAAMN	NKTTGACTWWHN	Dap-seq OMalley et al.(2016) WRKY59_col_a	0.818	0.492
fgenesh1_pg.C_Chr_11.0001000193 M02570_2.00	Ostreococcus tauri	NRGTCARNN	NNYTGACYN	PBM Weirauch et al.(2014) pTH9432	0.813	0.508
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GLYMA08G08340.1	WRKY	241	299	SDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRTDPNMLVITYTSEHNHP

Links
Other WRKY family TFs
Other *Glycine max* TFs

1629 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
29814.m000742	Ricinus communis	29814.m000742	N
Bo5g136860	Brassica oleracea	Bo5g136860	N
Bostr.19424s1045	Boechera stricta	Bostr.19424s1045	N
Bra034867	Brassica rapa	Bra034867	N
Cagra.1655s0059	Capsella grandiflora	Cagra.1655s0059	N
Carubv10015898m.g	Capsella rubella	Carubv10015898m.g	N
cassava20837.m1	Manihot esculenta	cassava20837.m1	N
cassava41267.m1	Manihot esculenta	cassava41267.m1	N
Ca_12464	Cicer arietinum	Ca_12464	N
Ciclev10032862m.g	Citrus clementina	Ciclev10032862m.g	N
Cucsa.136740	Cucumis sativus	Cucsa.136740	N
Eucgr.G03078	Eucalyptus grandis	Eucgr.G03078	N
evm.TU.supercontig_19.151	Carica papaya	evm.TU.supercontig_19.151	N
gene21008-v1.0-hybrid	Fragaria vesca	gene21008-v1.0-hybrid	N
GLYMA02G43220	Glycine max	GLYMA02G43220	N
GLYMA11G35500	Glycine max	GLYMA11G35500	N
GLYMA14G06270	Glycine max	GLYMA14G06270	N
GLYMA18G02910	Glycine max	GLYMA18G02910	N
Gorai.011G291500	Gossypium raimondii	Gorai.011G291500	N
Gorai.013G016900	Gossypium raimondii	Gorai.013G016900	N
LBD21	Arabidopsis lyrata	fgenesh2_kg.3__1152__AT3G11090.1	N
LBD21	Vitis vinifera	VIT_13s0067g01450	N
LBD21	Arabidopsis thaliana	AT3G11090	N
Lus10028986.g	Linum usitatissimum	Lus10028986.g	N
MDP0000220708	Malus domestica	MDP0000220708	N
MDP0000943252	Malus domestica	MDP0000943252	N
mgf019866m	Mimulus guttatus	mgf019866m	N
MTR_3g071420	Medicago truncatula	MTR_3g071420	N
MTR_5g083010	Medicago truncatula	MTR_5g083010	N
orange1.1g036565m.g	Citrus sinensis	orange1.1g036565m.g	N
PGSC0003DMG400027718	Solanum tuberosum	PGSC0003DMG400027718	N
Pm018957	Prunus mume	Pm018957	N
POPTR_0008s07150	Populus trichocarpa	POPTR_0008s07150	N
POPTR_0010s19340	Populus trichocarpa	POPTR_0010s19340	N
PRUPE_ppa012284mg	Prunus persica	PRUPE_ppa012284mg	N
SapurV1A.0061s0510	Salix purpurea	SapurV1A.0061s0510	N
SapurV1A.0650s0120	Salix purpurea	SapurV1A.0650s0120	N
Solyc03g095940.1	Solanum lycopersicum	Solyc03g095940.1	N
TCM_042466	Theobroma cacao	TCM_042466	N
Thhalv10021674m.g	Eutrema salsugineum	Thhalv10021674m.g	N

GLYMA08G08340 (Glycine max) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1629 Related TFs

GLYMA08G08340 **(Glycine max)
WRKY**