Pm005698 (Prunus mume)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pm005698 T355344_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY18
M02560_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7360 		0.868 0.831
WRKY18
M00900_2.00 		Arabidopsis thaliana
NVGTCNN
NNGACBN		 PBM
Franco-Zorrilla et al.(2014)
WRKY18 		0.868 0.831
WRKY18
M07416_2.00 		Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN		 Dap-seq
OMalley et al.(2016)
WRKY18_col_a 		0.868 0.831
WRKY18
M07417_2.00 		Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a 		0.868 0.831
WRKY18
M11465_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY18_Q2 		0.868 0.831
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.866 0.814
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.862 0.831
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.862 0.831
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.862 0.831
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.862 0.831
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm005698 WRKY 169 227

Links

Other WRKY family TFs
Other Prunus mume TFs

407 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB006415 Anopheles albimanus AALB006415 I
AARA010616 Anopheles arabiensis AARA010616 I
AATE016215 Anopheles atroparvus AATE016215 I
ACUA004409 Anopheles culicifacies ACUA004409 I
ACYPI005775 Acyrthosiphon pisum ACYPI005775 I
ADAC003252 Anopheles darlingi ADAC003252 I
AFAF011136 Anopheles farauti AFAF011136 I
AGAP000281 Anopheles gambiae AGAP000281 I
AMEC012857 Anopheles melas AMEC012857 I
AMEM006878 Anopheles merus AMEM006878 I
Aqu1.209664 Amphimedon queenslandica Aqu1.209664 N
ASIS016667 Anopheles sinensis ASIS016667 I
ASTEI07799 Anopheles stephensi ASTEI07799 I
BGIBMGA006848 Bombyx mori BGIBMGA006848 I
Bm4188 Brugia malayi Bm4188 N
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N
CGI_10017717 Crassostrea gigas CGI_10017717 I
CLEC001918 Cimex lectularius CLEC001918 I
D917_02150 Trichinella nativa D917_02150 N
D918_09264 Trichuris suis D918_09264 N
DAPPUDRAFT_19853 Daphnia pulex DAPPUDRAFT_19853 I
EDI_049480 Entamoeba dispar EDI_049480 N
EEL_0000223401 Elaeophora elaphi EEL_0000223401 N
EFV61455 Trichinella spiralis EFV61455 N
EHI_045480 Entamoeba histolytica EHI_045480 N
EHI_093800 Entamoeba histolytica EHI_093800 N
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I
ENSGMOG00000008081 Gadus morhua ENSGMOG00000008081 N
ENSGMOG00000013406 Gadus morhua ENSGMOG00000013406 N
ENSGMOG00000015161 Gadus morhua ENSGMOG00000015161 I
ENSMMUG00000014077 Macaca mulatta ENSMMUG00000014077 N
ENSONIG00000000284 Oreochromis niloticus ENSONIG00000000284 N
ENSONIG00000016627 Oreochromis niloticus ENSONIG00000016627 N
ENSPFOG00000002336 Poecilia formosa ENSPFOG00000002336 N
ENSPFOG00000008402 Poecilia formosa ENSPFOG00000008402 N
ENSSSCG00000023554 Sus scrofa ENSSSCG00000023554 N
ENSTGUG00000003811 Taeniopygia guttata ENSTGUG00000003811 N
ENSXMAG00000000362 Xiphophorus maculatus ENSXMAG00000000362 I
ENSXMAG00000016763 Xiphophorus maculatus ENSXMAG00000016763 N
fgenesh2_pg.scaffold_177000008 Branchiostoma floridae fgenesh2_pg.scaffold_177000008 N
fgenesh2_pg.scaffold_19000069 Branchiostoma floridae fgenesh2_pg.scaffold_19000069 N
GB43084 Apis mellifera GB43084 I
GPUH_0000021901 Gongylonema pulchrum GPUH_0000021901 N
HelroG145107 Helobdella robusta HelroG145107 N
HHAL000823-PA Halyomorpha halys HHAL000823-PA I
HMEL005034 Heliconius melpomene HMEL005034 I
Hmgb1 Rattus norvegicus ENSRNOG00000029813 N
ISCW015985 Ixodes scapularis ISCW015985 N
ISCW018867 Ixodes scapularis ISCW018867 I
KGM_14572 Danaus plexippus KGM_14572 I
LCUP006200 Lucilia cuprina LCUP006200 N
LOAG_18151 Loa loa LOAG_18151 N
LotgiG109021 Lottia gigantea LotgiG109021 I
MCINX005468 Melitaea cinxia MCINX005468 I
MDOA008605 Musca domestica MDOA008605 N
nAv.1.0.1.g02116 Acanthocheilonema viteae nAv.1.0.1.g02116 N
nDi.2.2.2.g11099 Dirofilaria immitis nDi.2.2.2.g11099 N
nLs.2.1.2.g04689 Litomosoides sigmodontis nLs.2.1.2.g04689 N
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N
nRc.2.0.1.g42996 Romanomermis culicivorax nRc.2.0.1.g42996 N
NV10488 Nasonia vitripennis NV10488 I
Ocbimv22012197m.g Octopus bimaculoides Ocbimv22012197m.g I
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N
RPRC000650 Rhodnius prolixus RPRC000650 I
Sakowv30024549m.g Saccoglossus kowalevskii Sakowv30024549m.g N
SMU15029818 Schmidtea mediterranea SMU15029818 I
SMUV_0000358401 Syphacia muris SMUV_0000358401 N
SPU_002060 Strongylocentrotus purpuratus SPU_002060 N
TC012723 Tribolium castaneum TC012723 I
TMUE_s0009009400 Trichuris muris TMUE_s0009009400 N
TMUE_s0011001600 Trichuris muris TMUE_s0011001600 I
tox2 Takifugu rubripes ENSTRUG00000013848 N
tox2 Tetraodon nigroviridis ENSTNIG00000005683 N
tox2 Oryzias latipes ENSORLG00000004818 N
tox2 Gasterosteus aculeatus ENSGACG00000006914 N
tox4.S Xenopus laevis XB-GENE-993810 I
tox4a Gasterosteus aculeatus ENSGACG00000014107 I
tox4b Oryzias latipes ENSORLG00000008779 N
tox4b Danio rerio ENSDARG00000100163 I
tox4b Tetraodon nigroviridis ENSTNIG00000003691 N
tox4b Takifugu rubripes ENSTRUG00000002594 N
TTRE_0000108401 Trichuris trichiura TTRE_0000108401 N
TTRE_0000401801 Trichuris trichiura TTRE_0000401801 I
WBGene00236865 Onchocerca volvulus WBGene00236865 N
WUBG_03914 Wuchereria bancrofti WUBG_03914 N
XP_002936155 Xenopus tropicalis XP_002936155 N