SNOG_08740 (Stagonospora nodorum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 SNOG_08740 T357836_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
xlr-1
M02621_2.00 		Neurospora crassa
NNNNWNNNN
NNNNWNNNN		 PBM
Weirauch et al.(2014)
pTH9683 		0.653 0.897
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNOT_08740 Zinc cluster 109 147

Links

Other Zinc cluster family TFs
Other Stagonospora nodorum TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29848.m004632 Ricinus communis 29848.m004632 I
Bo9g011380 Brassica oleracea Bo9g011380 I
Bo9g171490 Brassica oleracea Bo9g171490 I
Bostr.23997s0014 Boechera stricta Bostr.23997s0014 I
Bostr.29827s0278 Boechera stricta Bostr.29827s0278 I
Bra008985 Brassica rapa Bra008985 I
Bra036543 Brassica rapa Bra036543 I
Cagra.1110s0005 Capsella grandiflora Cagra.1110s0005 I
Carubv10002040m.g Capsella rubella Carubv10002040m.g I
Carubv10003042m.g Capsella rubella Carubv10003042m.g I
Carubv10003050m.g Capsella rubella Carubv10003050m.g I
cassava10120.m1 Manihot esculenta cassava10120.m1 I
cassava30505.valid.m1 Manihot esculenta cassava30505.valid.m1 I
cassava40012.m1 Manihot esculenta cassava40012.m1 I
Ca_01764 Cicer arietinum Ca_01764 I
Ca_09050 Cicer arietinum Ca_09050 I
Ciclev10009526m.g Citrus clementina Ciclev10009526m.g I
Cla021283 Citrullus lanatus Cla021283 I
Cucsa.310360 Cucumis sativus Cucsa.310360 I
evm.TU.supercontig_259.2 Carica papaya evm.TU.supercontig_259.2 I
gene11636-v1.0-hybrid Fragaria vesca gene11636-v1.0-hybrid I
GLYMA04G07140 Glycine max GLYMA04G07140 I
GLYMA06G07240 Glycine max GLYMA06G07240 I
GLYMA17G31900 Glycine max GLYMA17G31900 I
Gorai.004G292600 Gossypium raimondii Gorai.004G292600 I
Gorai.010G114800 Gossypium raimondii Gorai.010G114800 I
Gorai.011G082900 Gossypium raimondii Gorai.011G082900 I
LjSGA_019003.1 Lotus japonicus LjSGA_019003.1 I
Lus10002015.g Linum usitatissimum Lus10002015.g I
Lus10002912.g Linum usitatissimum Lus10002912.g I
Lus10019414.g Linum usitatissimum Lus10019414.g I
MDP0000178263 Malus domestica MDP0000178263 I
MDP0000287350 Malus domestica MDP0000287350 I
mgf017744m Mimulus guttatus mgf017744m I
MTR_1g012470 Medicago truncatula MTR_1g012470 I
MTR_3g107380 Medicago truncatula MTR_3g107380 I
orange1.1g028913m.g Citrus sinensis orange1.1g028913m.g I
PGSC0003DMG400030228 Solanum tuberosum PGSC0003DMG400030228 I
Pm004616 Prunus mume Pm004616 I
POPTR_0006s26990 Populus trichocarpa POPTR_0006s26990 I
POPTR_0018s01680 Populus trichocarpa POPTR_0018s01680 I
PRUPE_ppa023908mg Prunus persica PRUPE_ppa023908mg I
SapurV1A.0043s0690 Salix purpurea SapurV1A.0043s0690 I
SapurV1A.0192s0020 Salix purpurea SapurV1A.0192s0020 I
SHN2 Arabidopsis thaliana AT5G11190 D
SHN2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002026 I
SHN3 Arabidopsis thaliana AT5G25390 I
SHN3 Arabidopsis lyrata Al_scaffold_0006_1028 I
TCM_037007 Theobroma cacao TCM_037007 I
Thhalv10005514m.g Eutrema salsugineum Thhalv10005514m.g I
Thhalv10015363m.g Eutrema salsugineum Thhalv10015363m.g I
VIT_04s0008g05440 Vitis vinifera VIT_04s0008g05440 I