CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACRE_030130
(
Acremonium chrysogenum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
ACRE_030130
T359232_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ada-3
M01421_2.00
Neurospora crassa
VCKCGCGA
TCGCGMGB
PBM
Lambert et al.(2019)
pTH8620
0.637
0.811
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFH46199
Zinc cluster
30
66
RSCVTCRQRKVRCDKLMPCTNCRRAQSNCVYPAPGRA
Links
Other
Zinc cluster
family TFs
Other
Acremonium chrysogenum
TFs
123 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29889.m003394
Ricinus communis
29889.m003394
N
Aquca_029_00055
Aquilegia coerulea
Aquca_029_00055
N
AT3G17450
Arabidopsis thaliana
AT3G17450
N
Bostr.19424s0919
Boechera stricta
Bostr.19424s0919
N
Cagra.4396s0051
Capsella grandiflora
Cagra.4396s0051
N
Carubv10013083m.g
Capsella rubella
Carubv10013083m.g
N
cassava36089.valid.m1
Manihot esculenta
cassava36089.valid.m1
N
Ciclev10024195m.g
Citrus clementina
Ciclev10024195m.g
N
Cucsa.252180
Cucumis sativus
Cucsa.252180
N
Eucgr.B02527
Eucalyptus grandis
Eucgr.B02527
N
evm.TU.supercontig_519.2
Carica papaya
evm.TU.supercontig_519.2
N
gene22812-v1.0-hybrid
Fragaria vesca
gene22812-v1.0-hybrid
N
GLYMA09G09291
Glycine max
GLYMA09G09291
N
GLYMA15G21351
Glycine max
GLYMA15G21351
N
Gorai.008G135400
Gossypium raimondii
Gorai.008G135400
N
GSMUA_Achr3G12820_001
Musa acuminata
GSMUA_Achr3G12820_001
N
LjT35D18.120.nc
Lotus japonicus
LjT35D18.120.nc
N
MDP0000133479
Malus domestica
MDP0000133479
N
MDP0000314867
Malus domestica
MDP0000314867
N
orange1.1g044693m.g
Citrus sinensis
orange1.1g044693m.g
N
PK21594.1
Cannabis sativa
PK21594.1
N
Pm008491
Prunus mume
Pm008491
N
POPTR_0002s18950
Populus trichocarpa
POPTR_0002s18950
N
POPTR_0014s10940
Populus trichocarpa
POPTR_0014s10940
N
PRUPE_ppa001126mg
Prunus persica
PRUPE_ppa001126mg
N
SapurV1A.0014s0420
Salix purpurea
SapurV1A.0014s0420
N
SapurV1A.0294s0300
Salix purpurea
SapurV1A.0294s0300
N
TCM_004927
Theobroma cacao
TCM_004927
N
TCM_021492
Theobroma cacao
TCM_021492
N
Thhalv10020031m.g
Eutrema salsugineum
Thhalv10020031m.g
N
VIT_05s0020g00790
Vitis vinifera
VIT_05s0020g00790
N