CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VHEMI08389
(
Torrubiella hemipterigena
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VHEMI08389
T387838_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CEJ92758
Zinc cluster
16
53
LACTACRTRKSKCDGKRPTCQSCLQLSLECQYDAPESA
Links
Other
Zinc cluster
family TFs
Other
Torrubiella hemipterigena
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00009p00257950
Amborella trichopoda
AMTR_s00009p00257950
N
AtMYB41
Arabidopsis thaliana
AT4G28110
D
ATY13
Arabidopsis thaliana
AT1G74650
D
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
chr4.CM0126.410.nd
Lotus japonicus
chr4.CM0126.410.nd
N
evm.TU.supercontig_34.3
Carica papaya
evm.TU.supercontig_34.3
N
e_gw1.1.4.1
Physcomitrella patens
e_gw1.1.4.1
N
gene20254-v1.0-hybrid
Fragaria vesca
gene20254-v1.0-hybrid
N
GLYMA05G03780
Glycine max
GLYMA05G03780
I
GRMZM2G001223
Zea mays
GRMZM2G001223
I
GRMZM2G433450
Zea mays
GRMZM2G433450
N
GRMZM2G449056
Zea mays
GRMZM2G449056
N
MDP0000119369
Malus domestica
MDP0000119369
N
MDP0000911051
Malus domestica
MDP0000911051
N
mgf025944m
Mimulus guttatus
mgf025944m
N
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
MYB3
Arabidopsis thaliana
AT1G22640
D
OS07G0634900
Oryza sativa
OS07G0634900
N
OS08G0548000
Oryza sativa
OS08G0548000
N
OS12G0515300
Oryza sativa
OS12G0515300
N
PGSC0003DMG400013215
Solanum tuberosum
PGSC0003DMG400013215
I
PK15577.1
Cannabis sativa
PK15577.1
N
Traes_5AS_D238844BB
Triticum aestivum
Traes_5AS_D238844BB
N