CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OS08G0548000
(
Oryza sativa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OS08G0548000
T277269_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS08T0548000-01
Myb
1
33
KHPGKTEYRWSKIAAKLPGRTDNEIKNHWNTHI
Links
Other
Myb/SANT
family TFs
Other
Oryza sativa
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_4BL_61E35C455
Triticum aestivum
Traes_4BL_61E35C455
N
0.761
GLYMA05G03780
Glycine max
GLYMA05G03780
I
0.742
AtMYB41
Arabidopsis thaliana
AT4G28110
D
0.726
GRMZM2G177760
Zea mays
GRMZM2G177760
N
0.723
30147.m014198
Ricinus communis
30147.m014198
N
0.720
MYB3
Arabidopsis thaliana
AT1G22640
D
0.715
PGSC0003DMG400013215
Solanum tuberosum
PGSC0003DMG400013215
I
0.715
AMTR_s00009p00257950
Amborella trichopoda
AMTR_s00009p00257950
N
0.710
MDP0000119369
Malus domestica
MDP0000119369
N
0.700
mgf025944m
Mimulus guttatus
mgf025944m
N
0.699
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
0.690
OS12G0515300
Oryza sativa
OS12G0515300
N
0.690
Traes_5AS_D238844BB
Triticum aestivum
Traes_5AS_D238844BB
N
0.690
evm.TU.supercontig_34.3
Carica papaya
evm.TU.supercontig_34.3
N
0.687
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.683
e_gw1.1.4.1
Physcomitrella patens
e_gw1.1.4.1
N
0.683
MDP0000911051
Malus domestica
MDP0000911051
N
0.683
Traes_1BL_A44464337
Triticum aestivum
Traes_1BL_A44464337
N
0.682
GRMZM2G433450
Zea mays
GRMZM2G433450
N
0.680
OS04G0517100
Oryza sativa
OS04G0517100
N
0.680
SapurV1A.0006s0790
Salix purpurea
SapurV1A.0006s0790
I
0.680
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
0.672
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.672
GRMZM2G089686
Zea mays
GRMZM2G089686
I
0.672
29212.m000177
Ricinus communis
29212.m000177
N
0.670
Pavir.J06554
Panicum virgatum
Pavir.J06554
N
0.669
chr4.CM0126.410.nd
Lotus japonicus
chr4.CM0126.410.nd
N
0.666
ORGLA05G0226800
Oryza glaberrima
ORGLA05G0226800
N
0.664
PGSC0003DMG400004610
Solanum tuberosum
PGSC0003DMG400004610
N
0.664
gene24516-v1.0-hybrid
Fragaria vesca
gene24516-v1.0-hybrid
N
0.664
MLOC_12474
Hordeum vulgare
MLOC_12474
N
0.662
MLOC_59184
Hordeum vulgare
MLOC_59184
N
0.662
Traes_2DL_0E9BE0271
Triticum aestivum
Traes_2DL_0E9BE0271
N
0.662
TRIUR3_26472
Triticum urartu
TRIUR3_26472
N
0.662
Pavir.Ia03786
Panicum virgatum
Pavir.Ia03786
N
0.662