gene24516-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene24516-v1.0-hybrid T287372_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna24516.1-v1.0-hybrid Myb 97 130

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA05G0226800 Oryza glaberrima ORGLA05G0226800 N 0.794
PGSC0003DMG400004610 Solanum tuberosum PGSC0003DMG400004610 N 0.778
Traes_4BL_61E35C455 Triticum aestivum Traes_4BL_61E35C455 N 0.766
MDP0000119369 Malus domestica MDP0000119369 N 0.758
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.751
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.751
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.732
MYB3 Arabidopsis thaliana AT1G22640 D 0.728
OS04G0517100 Oryza sativa OS04G0517100 N 0.724
AMTR_s00009p00257950 Amborella trichopoda AMTR_s00009p00257950 N 0.724
evm.TU.supercontig_34.3 Carica papaya evm.TU.supercontig_34.3 N 0.724
mgf025944m Mimulus guttatus mgf025944m N 0.724
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.724
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.724
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.724
Ciclev10023519m.g Citrus clementina Ciclev10023519m.g N 0.718
e_gw1.1.4.1 Physcomitrella patens e_gw1.1.4.1 N 0.717
MDP0000911051 Malus domestica MDP0000911051 N 0.717
Traes_1BL_A44464337 Triticum aestivum Traes_1BL_A44464337 N 0.714
MDP0000879675 Malus domestica MDP0000879675 N 0.709
MLOC_59663 Hordeum vulgare MLOC_59663 I 0.704
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.699
Traes_5AS_D238844BB Triticum aestivum Traes_5AS_D238844BB N 0.699
MLOC_59184 Hordeum vulgare MLOC_59184 N 0.699
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I 0.698
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.697
Traes_4AL_17C974117 Triticum aestivum Traes_4AL_17C974117 N 0.697
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.696
GRMZM2G089686 Zea mays GRMZM2G089686 I 0.691
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.689
OS01G0685400 Oryza sativa OS01G0685400 N 0.683
chr4.CM0126.410.nd Lotus japonicus chr4.CM0126.410.nd N 0.683
Gorai.001G239000 Gossypium raimondii Gorai.001G239000 I 0.682
ATY13 Arabidopsis thaliana AT1G74650 D 0.682
MLOC_68511 Hordeum vulgare MLOC_68511 I 0.682
SapurV1A.0876s0040 Salix purpurea SapurV1A.0876s0040 I 0.682
mg021480m Mimulus guttatus mg021480m N 0.682
Pavir.J06554 Panicum virgatum Pavir.J06554 N 0.678
Pavir.Da00862 Panicum virgatum Pavir.Da00862 N 0.676
AtMYB40 Arabidopsis thaliana AT5G14340 D 0.675
MLOC_12474 Hordeum vulgare MLOC_12474 N 0.675
Traes_2DL_0E9BE0271 Triticum aestivum Traes_2DL_0E9BE0271 N 0.675
GLYMA08G27660 Glycine max GLYMA08G27660 I 0.670
PGSC0003DMG400013215 Solanum tuberosum PGSC0003DMG400013215 I 0.668
OS08G0548000 Oryza sativa OS08G0548000 N 0.664
AMTR_s00133p00075670 Amborella trichopoda AMTR_s00133p00075670 N 0.664
OLONG_005719 Oryza longistaminata OLONG_005719 N 0.664
POPTR_0017s10780 Populus trichocarpa POPTR_0017s10780 N 0.662